RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 CBARPQ8N350 705 aaPredicted RBP17.84■□□□□ 0.45
VARS2-206ENST00000473916 WFIKKN2Q8TEU8 576 aa17.84■□□□□ 0.45
VARS2-206ENST00000473916 UTP4Q969X6 686 aaKnown RBP17.84■□□□□ 0.45
VARS2-206ENST00000473916 FUBP1Q96AE4 644 aaKnown RBP17.84■□□□□ 0.45
VARS2-206ENST00000473916 NSUN5Q96P11 429 aaKnown RBP17.84■□□□□ 0.45
VARS2-206ENST00000473916 CCDC106Q9BWC9 280 aa17.84■□□□□ 0.45
VARS2-206ENST00000473916 TFB2MQ9H5Q4 396 aaKnown RBP17.84■□□□□ 0.45
VARS2-206ENST00000473916 TRPV4Q9HBA0 871 aa17.84■□□□□ 0.45
VARS2-206ENST00000473916 ZFP14Q9HCL3 533 aa17.84■□□□□ 0.45
VARS2-206ENST00000473916 SAR1AQ9NR31 198 aa17.84■□□□□ 0.45
VARS2-206ENST00000473916 ARHGEF3Q9NR81 526 aa17.84■□□□□ 0.45
VARS2-206ENST00000473916 DEC1Q9P2X7 70 aa17.84■□□□□ 0.45
VARS2-206ENST00000473916 MBD1Q9UIS9 605 aaPredicted RBP17.84■□□□□ 0.45
VARS2-206ENST00000473916 ITM2BQ9Y287 266 aa17.84■□□□□ 0.45
VARS2-206ENST00000473916 NCF1BA6NI72 391 aaPredicted RBP17.83■□□□□ 0.45
VARS2-206ENST00000473916 NCF1CA8MVU1 366 aaPredicted RBP17.83■□□□□ 0.45
VARS2-206ENST00000473916 SUPT3HB4E1H0 165 aa17.83■□□□□ 0.45
VARS2-206ENST00000473916 PPP6CO00743 305 aa17.83■□□□□ 0.45
VARS2-206ENST00000473916 KERAO60938 352 aa17.83■□□□□ 0.45
VARS2-206ENST00000473916 SUPT3HO75486 399 aa17.83■□□□□ 0.45
VARS2-206ENST00000473916 ENO1P06733 434 aaKnown RBP17.83■□□□□ 0.45
VARS2-206ENST00000473916 SERPINA6P08185 405 aa17.83■□□□□ 0.45
VARS2-206ENST00000473916 NCF1P14598 390 aaPredicted RBP17.83■□□□□ 0.45
VARS2-206ENST00000473916 SPINT3P49223 89 aa17.83■□□□□ 0.45
VARS2-206ENST00000473916 CDH13P55290 713 aa17.83■□□□□ 0.45
VARS2-206ENST00000473916 B4GALNT1Q00973 533 aa17.83■□□□□ 0.45
VARS2-206ENST00000473916 ASPHQ12797 758 aa17.83■□□□□ 0.45
VARS2-206ENST00000473916 FNDC3BQ53EP0 1204 aaKnown RBP17.83■□□□□ 0.45
VARS2-206ENST00000473916 SPDYAQ5MJ70 313 aa17.83■□□□□ 0.45
VARS2-206ENST00000473916 SEL1L3Q68CR1 1132 aa17.83■□□□□ 0.45
VARS2-206ENST00000473916 PTRHD1Q6GMV3 140 aaKnown RBP17.83■□□□□ 0.45
VARS2-206ENST00000473916 BRAT1Q6PJG6 821 aa17.83■□□□□ 0.45
VARS2-206ENST00000473916 RBFAQ8N0V3 343 aa17.83■□□□□ 0.45
VARS2-206ENST00000473916 PHTF2Q8N3S3 785 aa17.83■□□□□ 0.45
VARS2-206ENST00000473916 RHEBL1Q8TAI7 183 aa17.83■□□□□ 0.45
VARS2-206ENST00000473916 SCAMP4Q969E2 229 aa17.83■□□□□ 0.45
VARS2-206ENST00000473916 TIFAQ96CG3 184 aa17.83■□□□□ 0.45
VARS2-206ENST00000473916 CNDP1Q96KN2 507 aa17.83■□□□□ 0.45
VARS2-206ENST00000473916 RPP25Q9BUL9 199 aaKnown RBP17.83■□□□□ 0.45
VARS2-206ENST00000473916 LRMDAQ9H2I8 198 aa17.83■□□□□ 0.45
VARS2-206ENST00000473916 NSUN3Q9H649 340 aaKnown RBP17.83■□□□□ 0.45
VARS2-206ENST00000473916 CLEC1BQ9P126 229 aa17.83■□□□□ 0.45
VARS2-206ENST00000473916 RNF112Q9ULX5 631 aa17.83■□□□□ 0.45
VARS2-206ENST00000473916 APOBEC2Q9Y235 224 aaKnown RBP17.83■□□□□ 0.45
VARS2-206ENST00000473916 F8W8V4 182 aa17.82■□□□□ 0.44
VARS2-206ENST00000473916 PLK4O00444 970 aa17.82■□□□□ 0.44
VARS2-206ENST00000473916 SUPT7LO94864 414 aa17.82■□□□□ 0.44
VARS2-206ENST00000473916 ASLP04424 464 aa17.82■□□□□ 0.44
VARS2-206ENST00000473916 ZNF7P17097 686 aaPredicted RBP17.82■□□□□ 0.44
VARS2-206ENST00000473916 IMPDH1P20839 514 aa17.82■□□□□ 0.44
VARS2-206ENST00000473916 EPHA3P29320 983 aa17.82■□□□□ 0.44
VARS2-206ENST00000473916 HK3P52790 923 aa17.82■□□□□ 0.44
VARS2-206ENST00000473916 TMEM184AQ6ZMB5 413 aa17.82■□□□□ 0.44
VARS2-206ENST00000473916 SLC22A9Q8IVM8 553 aa17.82■□□□□ 0.44
VARS2-206ENST00000473916 FBXO27Q8NI29 283 aa17.82■□□□□ 0.44
VARS2-206ENST00000473916 CCDC126Q96EE4 140 aa17.82■□□□□ 0.44
VARS2-206ENST00000473916 PLA2G4CQ9UP65 541 aa17.82■□□□□ 0.44
VARS2-206ENST00000473916 CCDC189A1A4V9 331 aa17.82■□□□□ 0.44
VARS2-206ENST00000473916 AGAP14A8MT82 685 aa17.82■□□□□ 0.44
VARS2-206ENST00000473916 UPK3BL1B0FP48 263 aa17.82■□□□□ 0.44
VARS2-206ENST00000473916 UPK3BL2E5RIL1 263 aa17.82■□□□□ 0.44
VARS2-206ENST00000473916 HDAC3O15379 428 aa17.82■□□□□ 0.44
VARS2-206ENST00000473916 SMIM24O75264 130 aa17.82■□□□□ 0.44
VARS2-206ENST00000473916 TRIM16O95361 564 aa17.82■□□□□ 0.44
VARS2-206ENST00000473916 CD1EP15812 388 aa17.82■□□□□ 0.44
VARS2-206ENST00000473916 OPRD1P41143 372 aa17.82■□□□□ 0.44
VARS2-206ENST00000473916 ETV3P41162 512 aa17.82■□□□□ 0.44
VARS2-206ENST00000473916 IL2P60568 153 aa17.82■□□□□ 0.44
VARS2-206ENST00000473916 ST8SIA6P61647 398 aa17.82■□□□□ 0.44
VARS2-206ENST00000473916 HERVK_113P63132 956 aa17.82■□□□□ 0.44
VARS2-206ENST00000473916 NFKB2Q00653 900 aa17.82■□□□□ 0.44
VARS2-206ENST00000473916 KRT72Q14CN4 511 aa17.82■□□□□ 0.44
VARS2-206ENST00000473916 ZNF805Q5CZA5 627 aa17.82■□□□□ 0.44
VARS2-206ENST00000473916 PARM1Q6UWI2 310 aa17.82■□□□□ 0.44
VARS2-206ENST00000473916 PARS2Q7L3T8 475 aaKnown RBP17.82■□□□□ 0.44
VARS2-206ENST00000473916 CUZD1Q86UP6 607 aa17.82■□□□□ 0.44
VARS2-206ENST00000473916 NKAPQ8N5F7 415 aaKnown RBP17.82■□□□□ 0.44
VARS2-206ENST00000473916 KIAA1958Q8N8K9 716 aa17.82■□□□□ 0.44
VARS2-206ENST00000473916 FGF14Q92915 247 aa17.82■□□□□ 0.44
VARS2-206ENST00000473916 L3HYPDHQ96EM0 354 aa17.82■□□□□ 0.44
VARS2-206ENST00000473916 NSL1Q96IY1 281 aa17.82■□□□□ 0.44
VARS2-206ENST00000473916 MIPEPQ99797 713 aa17.82■□□□□ 0.44
VARS2-206ENST00000473916 ERVK-6Q9BXR3 956 aa17.82■□□□□ 0.44
VARS2-206ENST00000473916 STN1Q9H668 368 aaKnown RBP17.82■□□□□ 0.44
VARS2-206ENST00000473916 HCN2Q9UL51 889 aa17.82■□□□□ 0.44
VARS2-206ENST00000473916 SLC8A2Q9UPR5 921 aa17.82■□□□□ 0.44
VARS2-206ENST00000473916 STK38LQ9Y2H1 464 aa17.82■□□□□ 0.44
VARS2-206ENST00000473916 DHRS7Q9Y394 339 aa17.82■□□□□ 0.44
VARS2-206ENST00000473916 PCDHB1Q9Y5F3 818 aa17.82■□□□□ 0.44
VARS2-206ENST00000473916 TSPAN11A1L157 253 aa17.81■□□□□ 0.44
VARS2-206ENST00000473916 C16orf96A6NNT2 1141 aa17.81■□□□□ 0.44
VARS2-206ENST00000473916 A8MUI8 341 aa17.81■□□□□ 0.44
VARS2-206ENST00000473916 CCDC22O60826 627 aa17.81■□□□□ 0.44
VARS2-206ENST00000473916 TBX10O75333 385 aa17.81■□□□□ 0.44
VARS2-206ENST00000473916 RASSF9O75901 435 aa17.81■□□□□ 0.44
VARS2-206ENST00000473916 SLC25A14O95258 325 aaPredicted RBP17.81■□□□□ 0.44
VARS2-206ENST00000473916 TPBGLP0DKB5 382 aa17.81■□□□□ 0.44
VARS2-206ENST00000473916 GFAPP14136 432 aa17.81■□□□□ 0.44
VARS2-206ENST00000473916 CD9P21926 228 aa17.81■□□□□ 0.44
VARS2-206ENST00000473916 RPS3P23396 243 aaKnown RBP eCLIP17.81■□□□□ 0.442e-8■■□□□ 13.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms