RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 EDC4Q6P2E9 1401 aaKnown RBP1.7□□□□□ -2.14
CCDC39-203ENST00000473854 PPIP5K1Q6PFW1 1433 aa1.7□□□□□ -2.14
CCDC39-203ENST00000473854 KCTD18Q6PI47 426 aaPredicted RBP1.7□□□□□ -2.14
CCDC39-203ENST00000473854 SSH2Q76I76 1423 aa1.7□□□□□ -2.14
CCDC39-203ENST00000473854 CTAGE4Q8IX94 777 aa1.7□□□□□ -2.14
CCDC39-203ENST00000473854 SYTL1Q8IYJ3 562 aa1.7□□□□□ -2.14
CCDC39-203ENST00000473854 FAM9BQ8IZU0 186 aa1.7□□□□□ -2.14
CCDC39-203ENST00000473854 SLC34A3Q8N130 599 aa1.7□□□□□ -2.14
CCDC39-203ENST00000473854 PARP16Q8N5Y8 322 aa1.7□□□□□ -2.14
CCDC39-203ENST00000473854 CSGALNACT1Q8TDX6 532 aa1.7□□□□□ -2.14
CCDC39-203ENST00000473854 DOT1LQ8TEK3 1739 aa1.7□□□□□ -2.14
CCDC39-203ENST00000473854 PARD3BQ8TEW8 1205 aa1.7□□□□□ -2.14
CCDC39-203ENST00000473854 DUSP19Q8WTR2 217 aa1.7□□□□□ -2.14
CCDC39-203ENST00000473854 CCDC138Q96M89 665 aa1.7□□□□□ -2.14
CCDC39-203ENST00000473854 GPATCH1Q9BRR8 931 aaKnown RBP1.7□□□□□ -2.14
CCDC39-203ENST00000473854 BABAM1Q9NWV8 329 aa1.7□□□□□ -2.14
CCDC39-203ENST00000473854 CISD1Q9NZ45 108 aaKnown RBP1.7□□□□□ -2.14
CCDC39-203ENST00000473854 TINAGQ9UJW2 476 aa1.7□□□□□ -2.14
CCDC39-203ENST00000473854 DAPP1Q9UN19 280 aa1.7□□□□□ -2.14
CCDC39-203ENST00000473854 C19orf53Q9UNZ5 99 aaPredicted RBP1.7□□□□□ -2.14
CCDC39-203ENST00000473854 OR2W1Q9Y3N9 320 aa1.7□□□□□ -2.14
CCDC39-203ENST00000473854 NFE2L3Q9Y4A8 694 aa1.7□□□□□ -2.14
CCDC39-203ENST00000473854 LAMA4Q16363 1823 aa1.7□□□□□ -2.14
CCDC39-203ENST00000473854 POLR3AO14802 1390 aaPredicted RBP1.7□□□□□ -2.14
CCDC39-203ENST00000473854 NINLQ9Y2I6 1382 aa1.7□□□□□ -2.14
CCDC39-203ENST00000473854 MYH13Q9UKX3 1938 aa1.7□□□□□ -2.14
CCDC39-203ENST00000473854 PCNTO95613 3336 aa1.69□□□□□ -2.14
CCDC39-203ENST00000473854 USP6P35125 1406 aa1.69□□□□□ -2.14
CCDC39-203ENST00000473854 ANKARQ7Z5J8 1434 aa1.69□□□□□ -2.14
CCDC39-203ENST00000473854 ADGRL3Q9HAR2 1447 aa1.69□□□□□ -2.14
CCDC39-203ENST00000473854 ECM29Q5VYK3 1845 aa1.69□□□□□ -2.14
CCDC39-203ENST00000473854 SBF2Q86WG5 1849 aa1.69□□□□□ -2.14
CCDC39-203ENST00000473854 A6NL46 340 aa1.69□□□□□ -2.14
CCDC39-203ENST00000473854 TMEM178BH3BS89 294 aa1.69□□□□□ -2.14
CCDC39-203ENST00000473854 FFAR2O15552 330 aa1.69□□□□□ -2.14
CCDC39-203ENST00000473854 SEPT4O43236 478 aa1.69□□□□□ -2.14
CCDC39-203ENST00000473854 PI15O43692 258 aa1.69□□□□□ -2.14
CCDC39-203ENST00000473854 TNFRSF6BO95407 300 aa1.69□□□□□ -2.14
CCDC39-203ENST00000473854 ABCB4P21439 1286 aa1.69□□□□□ -2.14
CCDC39-203ENST00000473854 TM4SF4P48230 202 aa1.69□□□□□ -2.14
CCDC39-203ENST00000473854 RPL24P83731 157 aaKnown RBP1.69□□□□□ -2.14
CCDC39-203ENST00000473854 ARHGAP8P85298 464 aa1.69□□□□□ -2.14
CCDC39-203ENST00000473854 MS4A2Q01362 244 aa1.69□□□□□ -2.14
CCDC39-203ENST00000473854 PPARDQ03181 441 aa1.69□□□□□ -2.14
CCDC39-203ENST00000473854 SPOCK1Q08629 439 aa1.69□□□□□ -2.14
CCDC39-203ENST00000473854 ITGADQ13349 1161 aa1.69□□□□□ -2.14
CCDC39-203ENST00000473854 RUNX2Q13950 521 aa1.69□□□□□ -2.14
CCDC39-203ENST00000473854 SPARCL1Q14515 664 aa1.69□□□□□ -2.14
CCDC39-203ENST00000473854 SOWAHAQ2M3V2 549 aa1.69□□□□□ -2.14
CCDC39-203ENST00000473854 AP5B1Q2VPB7 878 aa1.69□□□□□ -2.14
CCDC39-203ENST00000473854 KIAA1644Q3SXP7 199 aa1.69□□□□□ -2.14
CCDC39-203ENST00000473854 GALNTL6Q49A17 601 aa1.69□□□□□ -2.14
CCDC39-203ENST00000473854 GLIPR1L2Q4G1C9 344 aa1.69□□□□□ -2.14
CCDC39-203ENST00000473854 TMEM35AQ53FP2 167 aa1.69□□□□□ -2.14
CCDC39-203ENST00000473854 ADAMTSL4-AS1Q5T5F5 129 aa1.69□□□□□ -2.14
CCDC39-203ENST00000473854 FAM171BQ6P995 826 aa1.69□□□□□ -2.14
CCDC39-203ENST00000473854 GJB7Q6PEY0 223 aa1.69□□□□□ -2.14
CCDC39-203ENST00000473854 SYNE3Q6ZMZ3 975 aa1.69□□□□□ -2.14
CCDC39-203ENST00000473854 TAOK1Q7L7X3 1001 aa1.69□□□□□ -2.14
CCDC39-203ENST00000473854 C11orf96Q7Z7L8 435 aa1.69□□□□□ -2.14
CCDC39-203ENST00000473854 LURAP1LQ8IV03 231 aa1.69□□□□□ -2.14
CCDC39-203ENST00000473854 FSIP1Q8NA03 581 aa1.69□□□□□ -2.14
CCDC39-203ENST00000473854 SETD9Q8NE22 299 aa1.69□□□□□ -2.14
CCDC39-203ENST00000473854 DNAAF1Q8NEP3 725 aa1.69□□□□□ -2.14
CCDC39-203ENST00000473854 STYXQ8WUJ0 223 aa1.69□□□□□ -2.14
CCDC39-203ENST00000473854 SNAPC3Q92966 411 aa1.69□□□□□ -2.14
CCDC39-203ENST00000473854 C8orf48Q96LL4 319 aa1.69□□□□□ -2.14
CCDC39-203ENST00000473854 LINC00167Q96N53 147 aa1.69□□□□□ -2.14
CCDC39-203ENST00000473854 PRAM1Q96QH2 718 aa1.69□□□□□ -2.14
CCDC39-203ENST00000473854 RTKNQ9BST9 563 aa1.69□□□□□ -2.14
CCDC39-203ENST00000473854 NPLQ9BXD5 320 aaPredicted RBP1.69□□□□□ -2.14
CCDC39-203ENST00000473854 RAD21L1Q9H4I0 556 aa1.69□□□□□ -2.14
CCDC39-203ENST00000473854 PLEKHA4Q9H4M7 779 aa1.69□□□□□ -2.14
CCDC39-203ENST00000473854 ELAC1Q9H777 363 aaKnown RBP1.69□□□□□ -2.14
CCDC39-203ENST00000473854 STK26Q9P289 416 aa1.69□□□□□ -2.14
CCDC39-203ENST00000473854 ASIC3Q9UHC3 531 aa1.69□□□□□ -2.14
CCDC39-203ENST00000473854 ACAD8Q9UKU7 415 aa1.69□□□□□ -2.14
CCDC39-203ENST00000473854 NUDCQ9Y266 331 aa1.69□□□□□ -2.14
CCDC39-203ENST00000473854 ROBO1Q9Y6N7 1651 aa1.69□□□□□ -2.14
CCDC39-203ENST00000473854 MYH15Q9Y2K3 1946 aa1.69□□□□□ -2.14
CCDC39-203ENST00000473854 COL22A1Q8NFW1 1626 aaPredicted RBP1.69□□□□□ -2.14
CCDC39-203ENST00000473854 PXDNQ92626 1479 aa1.69□□□□□ -2.14
CCDC39-203ENST00000473854 MYH14Q7Z406 1995 aaKnown RBP1.68□□□□□ -2.14
CCDC39-203ENST00000473854 EVC2Q86UK5 1308 aa1.68□□□□□ -2.14
CCDC39-203ENST00000473854 NUP98P52948 1817 aa1.68□□□□□ -2.14
CCDC39-203ENST00000473854 TAF1LQ8IZX4 1826 aa1.68□□□□□ -2.14
CCDC39-203ENST00000473854 NPHP4O75161 1426 aaPredicted RBP1.68□□□□□ -2.14
CCDC39-203ENST00000473854 LAMB2P55268 1798 aa1.68□□□□□ -2.14
CCDC39-203ENST00000473854 BCORQ6W2J9 1755 aa1.68□□□□□ -2.14
CCDC39-203ENST00000473854 CTSVO60911 334 aa1.68□□□□□ -2.14
CCDC39-203ENST00000473854 ACTL6BO94805 426 aa1.68□□□□□ -2.14
CCDC39-203ENST00000473854 EML2O95834 649 aa1.68□□□□□ -2.14
CCDC39-203ENST00000473854 ADAP00813 363 aa1.68□□□□□ -2.14
CCDC39-203ENST00000473854 PRB2P02812 416 aaPredicted RBP1.68□□□□□ -2.14
CCDC39-203ENST00000473854 ITGA2BP08514 1039 aa1.68□□□□□ -2.14
CCDC39-203ENST00000473854 CYP21A2P08686 494 aa1.68□□□□□ -2.14
CCDC39-203ENST00000473854 ACP5P13686 325 aa1.68□□□□□ -2.14
CCDC39-203ENST00000473854 TNNT1P13805 278 aa1.68□□□□□ -2.14
CCDC39-203ENST00000473854 TRIM27P14373 513 aa1.68□□□□□ -2.14
CCDC39-203ENST00000473854 PTPN2P17706 415 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms