RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 BMP1P13497 986 aa10.86□□□□□ -0.67
C9orf3-214ENST00000473778 HLA-DPA1P20036 260 aa10.86□□□□□ -0.67
C9orf3-214ENST00000473778 VARSP26640 1264 aaKnown RBP10.86□□□□□ -0.67
C9orf3-214ENST00000473778 MERTKQ12866 999 aa10.86□□□□□ -0.67
C9orf3-214ENST00000473778 TRIP4Q15650 581 aaPredicted RBP10.86□□□□□ -0.67
C9orf3-214ENST00000473778 ATP6AP1Q15904 470 aa10.86□□□□□ -0.67
C9orf3-214ENST00000473778 CYP51A1Q16850 503 aa10.86□□□□□ -0.67
C9orf3-214ENST00000473778 C10orf120Q5SQS8 335 aa10.86□□□□□ -0.67
C9orf3-214ENST00000473778 PSAPL1Q6NUJ1 521 aa10.86□□□□□ -0.67
C9orf3-214ENST00000473778 RSPO2Q6UXX9 243 aaPredicted RBP10.86□□□□□ -0.67
C9orf3-214ENST00000473778 NCCRP1Q6ZVX7 275 aaPredicted RBP10.86□□□□□ -0.67
C9orf3-214ENST00000473778 CHST15Q7LFX5 561 aaPredicted RBP10.86□□□□□ -0.67
C9orf3-214ENST00000473778 ALDH16A1Q8IZ83 802 aa10.86□□□□□ -0.67
C9orf3-214ENST00000473778 ZNF786Q8N393 782 aa10.86□□□□□ -0.67
C9orf3-214ENST00000473778 FBXO39Q8N4B4 442 aa10.86□□□□□ -0.67
C9orf3-214ENST00000473778 OR7D4Q8NG98 312 aa10.86□□□□□ -0.67
C9orf3-214ENST00000473778 GABPB2Q8TAK5 448 aaPredicted RBP10.86□□□□□ -0.67
C9orf3-214ENST00000473778 LINC01599Q8WXQ3 324 aa10.86□□□□□ -0.67
C9orf3-214ENST00000473778 C8orf48Q96LL4 319 aa10.86□□□□□ -0.67
C9orf3-214ENST00000473778 HBEGFQ99075 208 aa10.86□□□□□ -0.67
C9orf3-214ENST00000473778 ARHGAP39Q9C0H5 1083 aa10.86□□□□□ -0.67
C9orf3-214ENST00000473778 DERL2Q9GZP9 239 aa10.86□□□□□ -0.67
C9orf3-214ENST00000473778 ALG2Q9H553 416 aa10.86□□□□□ -0.67
C9orf3-214ENST00000473778 RPF2Q9H7B2 306 aaKnown RBP10.86□□□□□ -0.67
C9orf3-214ENST00000473778 IL37Q9NZH6 218 aa10.86□□□□□ -0.67
C9orf3-214ENST00000473778 HCSTQ9UBK5 93 aa10.86□□□□□ -0.67
C9orf3-214ENST00000473778 RNF112Q9ULX5 631 aa10.86□□□□□ -0.67
C9orf3-214ENST00000473778 A0A1W2PP18 115 aa10.85□□□□□ -0.67
C9orf3-214ENST00000473778 FAM92AA1XBS5 289 aa10.85□□□□□ -0.67
C9orf3-214ENST00000473778 IQCA1LA6NCM1 817 aa10.85□□□□□ -0.67
C9orf3-214ENST00000473778 TRIM64A6NGJ6 449 aa10.85□□□□□ -0.67
C9orf3-214ENST00000473778 FOXD2O60548 495 aaPredicted RBP10.85□□□□□ -0.67
C9orf3-214ENST00000473778 NIPSNAP2O75323 286 aa10.85□□□□□ -0.67
C9orf3-214ENST00000473778 RHOBTB1O94844 696 aa10.85□□□□□ -0.67
C9orf3-214ENST00000473778 C1RP00736 705 aa10.85□□□□□ -0.67
C9orf3-214ENST00000473778 MYF6P23409 242 aa10.85□□□□□ -0.67
C9orf3-214ENST00000473778 HRH2P25021 359 aa10.85□□□□□ -0.67
C9orf3-214ENST00000473778 PSMA4P25789 261 aaKnown RBP10.85□□□□□ -0.67
C9orf3-214ENST00000473778 PHEXP78562 749 aa10.85□□□□□ -0.67
C9orf3-214ENST00000473778 TMED1Q13445 227 aa10.85□□□□□ -0.67
C9orf3-214ENST00000473778 ZNF235Q14590 738 aa10.85□□□□□ -0.67
C9orf3-214ENST00000473778 ADRM1Q16186 407 aa10.85□□□□□ -0.67
C9orf3-214ENST00000473778 PARP15Q460N3 678 aa10.85□□□□□ -0.67
C9orf3-214ENST00000473778 XKR7Q5GH72 579 aa10.85□□□□□ -0.67
C9orf3-214ENST00000473778 VARS2Q5ST30 1063 aaKnown RBP10.85□□□□□ -0.67
C9orf3-214ENST00000473778 COLGALT2Q8IYK4 626 aa10.85□□□□□ -0.67
C9orf3-214ENST00000473778 ATP6V0D2Q8N8Y2 350 aa10.85□□□□□ -0.67
C9orf3-214ENST00000473778 OR52B6Q8NGF0 335 aa10.85□□□□□ -0.67
C9orf3-214ENST00000473778 FBXO32Q969P5 355 aa10.85□□□□□ -0.67
C9orf3-214ENST00000473778 UROC1Q96N76 676 aa10.85□□□□□ -0.67
C9orf3-214ENST00000473778 ZNF599Q96NL3 588 aa10.85□□□□□ -0.67
C9orf3-214ENST00000473778 HAUS8Q9BT25 410 aa10.85□□□□□ -0.67
C9orf3-214ENST00000473778 FBXO44Q9H4M3 255 aa10.85□□□□□ -0.67
C9orf3-214ENST00000473778 AIG1Q9NVV5 245 aa10.85□□□□□ -0.67
C9orf3-214ENST00000473778 SPATA7Q9P0W8 599 aa10.85□□□□□ -0.67
C9orf3-214ENST00000473778 EVLQ9UI08 416 aaPredicted RBP10.85□□□□□ -0.67
C9orf3-214ENST00000473778 PCTPQ9UKL6 214 aa10.85□□□□□ -0.67
C9orf3-214ENST00000473778 SLC8A2Q9UPR5 921 aa10.85□□□□□ -0.67
C9orf3-214ENST00000473778 LCHNA4D1U4 455 aa10.85□□□□□ -0.67
C9orf3-214ENST00000473778 H0Y858 1186 aa10.85□□□□□ -0.67
C9orf3-214ENST00000473778 BTN3A1O00481 513 aa10.85□□□□□ -0.67
C9orf3-214ENST00000473778 TNPO2O14787 897 aaKnown RBP10.85□□□□□ -0.67
C9orf3-214ENST00000473778 ADAMTS4O75173 837 aa10.85□□□□□ -0.67
C9orf3-214ENST00000473778 BMP10O95393 424 aa10.85□□□□□ -0.67
C9orf3-214ENST00000473778 IDO1P14902 403 aa10.85□□□□□ -0.67
C9orf3-214ENST00000473778 OGNP20774 298 aaKnown RBP10.85□□□□□ -0.67
C9orf3-214ENST00000473778 CASP2P42575 452 aa10.85□□□□□ -0.67
C9orf3-214ENST00000473778 OR1G1P47890 313 aa10.85□□□□□ -0.67
C9orf3-214ENST00000473778 TUBA4AP68366 448 aa10.85□□□□□ -0.67
C9orf3-214ENST00000473778 LIPEQ05469 1076 aa10.85□□□□□ -0.67
C9orf3-214ENST00000473778 NFYCQ13952 458 aa10.85□□□□□ -0.67
C9orf3-214ENST00000473778 BTG3Q14201 252 aaPredicted RBP10.85□□□□□ -0.67
C9orf3-214ENST00000473778 MBTPS1Q14703 1052 aa10.85□□□□□ -0.67
C9orf3-214ENST00000473778 C18orf21Q32NC0 220 aaPredicted RBP10.85□□□□□ -0.67
C9orf3-214ENST00000473778 TIGD2Q4W5G0 525 aa10.85□□□□□ -0.67
C9orf3-214ENST00000473778 CYBRD1Q53TN4 286 aa10.85□□□□□ -0.67
C9orf3-214ENST00000473778 ALG1LQ6GMV1 187 aa10.85□□□□□ -0.67
C9orf3-214ENST00000473778 OGFOD2Q6N063 350 aa10.85□□□□□ -0.67
C9orf3-214ENST00000473778 DUS1LQ6P1R4 473 aaKnown RBP10.85□□□□□ -0.67
C9orf3-214ENST00000473778 SPRED1Q7Z699 444 aa10.85□□□□□ -0.67
C9orf3-214ENST00000473778 CAMK1DQ8IU85 385 aa10.85□□□□□ -0.67
C9orf3-214ENST00000473778 ERI1Q8IV48 349 aaKnown RBP10.85□□□□□ -0.67
C9orf3-214ENST00000473778 C2orf69Q8N8R5 385 aa10.85□□□□□ -0.67
C9orf3-214ENST00000473778 SIDT2Q8NBJ9 832 aaKnown RBP10.85□□□□□ -0.67
C9orf3-214ENST00000473778 STAG3L4Q8TBR4 150 aa10.85□□□□□ -0.67
C9orf3-214ENST00000473778 HM13Q8TCT9 377 aa10.85□□□□□ -0.67
C9orf3-214ENST00000473778 PROKR1Q8TCW9 393 aa10.85□□□□□ -0.67
C9orf3-214ENST00000473778 SNRNP27Q8WVK2 155 aaKnown RBP10.85□□□□□ -0.67
C9orf3-214ENST00000473778 ISOC1Q96CN7 298 aa10.85□□□□□ -0.67
C9orf3-214ENST00000473778 CENPNQ96H22 339 aaPredicted RBP10.85□□□□□ -0.67
C9orf3-214ENST00000473778 ASB2Q96Q27 587 aa10.85□□□□□ -0.67
C9orf3-214ENST00000473778 POPDC3Q9HBV1 291 aa10.85□□□□□ -0.67
C9orf3-214ENST00000473778 TLR9Q9NR96 1032 aa10.85□□□□□ -0.67
C9orf3-214ENST00000473778 NLE1Q9NVX2 485 aaPredicted RBP10.85□□□□□ -0.67
C9orf3-214ENST00000473778 FNDC3AQ9Y2H6 1198 aaKnown RBP10.85□□□□□ -0.67
C9orf3-214ENST00000473778 NEUROG3Q9Y4Z2 214 aa10.85□□□□□ -0.67
C9orf3-214ENST00000473778 IQCF5A8MTL0 148 aa10.84□□□□□ -0.67
C9orf3-214ENST00000473778 MAGEB3O15480 346 aa10.84□□□□□ -0.67
C9orf3-214ENST00000473778 RASAL1O95294 804 aa10.84□□□□□ -0.67
C9orf3-214ENST00000473778 SNAP29O95721 258 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms