RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 DHHO43323 396 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 TLX3O43711 291 aaPredicted RBP2.42□□□□□ -2.02
CALD1-216ENST00000473714 DKC1O60832 514 aaKnown RBP eCLIP2.42□□□□□ -2.02
CALD1-216ENST00000473714 CBFA2T3O75081 653 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 ATP9AO75110 1047 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 AKAP3O75969 853 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 SEC14L2O76054 403 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 BEST1O76090 585 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 PDE8BO95263 885 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 SIX3O95343 332 aaPredicted RBP2.42□□□□□ -2.02
CALD1-216ENST00000473714 GH2P01242 217 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 URODP06132 367 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 IGKV5-2P06315 115 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 ALDOCP09972 364 aaKnown RBP2.42□□□□□ -2.02
CALD1-216ENST00000473714 IRF1P10914 325 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 LYL1P12980 280 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 LAMP2P13473 410 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 RARGP13631 454 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 PKMP14618 531 aaKnown RBP2.42□□□□□ -2.02
CALD1-216ENST00000473714 PORP16435 677 aaPredicted RBP2.42□□□□□ -2.02
CALD1-216ENST00000473714 HOXB9P17482 250 aaPredicted RBP2.42□□□□□ -2.02
CALD1-216ENST00000473714 DUSP1P28562 367 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 EPHA8P29322 1005 aaPredicted RBP2.42□□□□□ -2.02
CALD1-216ENST00000473714 MCM5P33992 734 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 BSGP35613 385 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 HNF1BP35680 557 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 DCTP40126 519 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 NNMTP40261 264 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 EIF2DP41214 584 aaKnown RBP2.42□□□□□ -2.02
CALD1-216ENST00000473714 BTDP43251 543 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 AVPR1BP47901 424 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 PTH2RP49190 550 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 DIO1P49895 249 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 MRPL12P52815 198 aaKnown RBP2.42□□□□□ -2.02
CALD1-216ENST00000473714 EEFSECP57772 596 aaKnown RBP2.42□□□□□ -2.02
CALD1-216ENST00000473714 EFNB1P98172 346 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 FOXF2Q12947 444 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 DNASE1L3Q13609 305 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 TP53BP2Q13625 1128 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 FRG1Q14331 258 aaKnown RBP2.42□□□□□ -2.02
CALD1-216ENST00000473714 PPP2R5BQ15173 497 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 RASA2Q15283 850 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 GSTA3Q16772 222 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 PFKFB3Q16875 520 aaPredicted RBP2.42□□□□□ -2.02
CALD1-216ENST00000473714 LETM2Q2VYF4 491 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 BEAN1Q3B7T3 259 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 DPCR1Q3MIW9 517 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 ALDH1L2Q3SY69 923 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 ANXA2RQ3ZCQ2 193 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 BMP2KLQ5H9B9 411 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 KIAA1755Q5JYT7 1200 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 SH2D4BQ5SQS7 431 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 PLPP4Q5VZY2 271 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 KRTAP5-1Q6L8H4 278 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 DHRS13Q6UX07 377 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 VSTM1Q6UX27 236 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 ZNF852Q6ZMS4 543 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 Q6ZWC4 215 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 ZNF551Q7Z340 670 aaPredicted RBP2.42□□□□□ -2.02
CALD1-216ENST00000473714 TMPRSS9Q7Z410 1059 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 TADA2BQ86TJ2 420 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 KBTBD6Q86V97 674 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 MON1AQ86VX9 555 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 MARCH9Q86YJ5 346 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 FAM109AQ8N4B1 249 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 APPL2Q8NEU8 664 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 APBB2Q92870 758 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 CAVIN3Q969G5 261 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 ELP4Q96EB1 424 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 TRMT61AQ96FX7 289 aaKnown RBP2.42□□□□□ -2.02
CALD1-216ENST00000473714 WDYHV1Q96HA8 205 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 PRR11Q96HE9 360 aaPredicted RBP2.42□□□□□ -2.02
CALD1-216ENST00000473714 RADILQ96JH8 1075 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 CMTM3Q96MX0 182 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 PIP5K1AQ99755 562 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.42□□□□□ -2.02
CALD1-216ENST00000473714 HDHD5Q9BXW7 423 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 ITPAQ9BY32 194 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 CADM1Q9BY67 442 aaKnown RBP2.42□□□□□ -2.02
CALD1-216ENST00000473714 USP44Q9H0E7 712 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 PANK3Q9H999 370 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 KCNK9Q9NPC2 374 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 SMYD2Q9NRG4 433 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 ABHD10Q9NUJ1 306 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 TMEM74BQ9NUR3 256 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 MRGBPQ9NV56 204 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 ASNSD1Q9NWL6 643 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 ARL15Q9NXU5 204 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 MTMR4Q9NYA4 1195 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 TAB2Q9NYJ8 693 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 CPSF2Q9P2I0 782 aaKnown RBP2.42□□□□□ -2.02
CALD1-216ENST00000473714 IPO11Q9UI26 975 aaKnown RBP2.42□□□□□ -2.02
CALD1-216ENST00000473714 ST3GAL5Q9UNP4 418 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 DDX49Q9Y6V7 483 aaKnown RBP2.42□□□□□ -2.02
CALD1-216ENST00000473714 GON4LQ3T8J9 2241 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 AKAP9Q99996 3911 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 NBASA2RRP1 2371 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 CNTNAP2Q9UHC6 1331 aa2.42□□□□□ -2.02
CALD1-216ENST00000473714 PDCD11Q14690 1871 aaKnown RBP2.41□□□□□ -2.02
CALD1-216ENST00000473714 F5P12259 2224 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms