RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 EML2O95834 649 aa13.37□□□□□ -0.27
CHD3-209ENST00000473376 ATP1A1P05023 1023 aaKnown RBP13.37□□□□□ -0.27
CHD3-209ENST00000473376 LIFP15018 202 aa13.37□□□□□ -0.27
CHD3-209ENST00000473376 CASP14P31944 242 aa13.37□□□□□ -0.27
CHD3-209ENST00000473376 NOP2P46087 812 aaKnown RBP13.37□□□□□ -0.27
CHD3-209ENST00000473376 IL11RAQ14626 422 aa13.37□□□□□ -0.27
CHD3-209ENST00000473376 ZNF569Q5MCW4 686 aa13.37□□□□□ -0.27
CHD3-209ENST00000473376 ANKS6Q68DC2 871 aa13.37□□□□□ -0.27
CHD3-209ENST00000473376 CCDC70Q6NSX1 233 aa13.37□□□□□ -0.27
CHD3-209ENST00000473376 ABRAXAS1Q6UWZ7 409 aa13.37□□□□□ -0.27
CHD3-209ENST00000473376 PRICKLE2Q7Z3G6 844 aa13.37□□□□□ -0.27
CHD3-209ENST00000473376 FAM129CQ86XR2 697 aa13.37□□□□□ -0.27
CHD3-209ENST00000473376 BRSK1Q8TDC3 778 aa13.37□□□□□ -0.27
CHD3-209ENST00000473376 NCSTNQ92542 709 aa13.37□□□□□ -0.27
CHD3-209ENST00000473376 GLYATL1Q969I3 302 aa13.37□□□□□ -0.27
CHD3-209ENST00000473376 EID2BQ96D98 161 aa13.37□□□□□ -0.27
CHD3-209ENST00000473376 SMIM14Q96QK8 99 aa13.37□□□□□ -0.27
CHD3-209ENST00000473376 MAK16Q9BXY0 300 aaKnown RBP13.37□□□□□ -0.27
CHD3-209ENST00000473376 TRABDQ9H4I3 376 aa13.37□□□□□ -0.27
CHD3-209ENST00000473376 POT1Q9NUX5 634 aa13.37□□□□□ -0.27
CHD3-209ENST00000473376 WDR70Q9NW82 654 aa13.37□□□□□ -0.27
CHD3-209ENST00000473376 ZNHIT6Q9NWK9 470 aaKnown RBP13.37□□□□□ -0.27
CHD3-209ENST00000473376 TMEM9Q9P0T7 183 aa13.37□□□□□ -0.27
CHD3-209ENST00000473376 ATXN10Q9UBB4 475 aa13.37□□□□□ -0.27
CHD3-209ENST00000473376 EPHA6Q9UF33 1036 aa13.37□□□□□ -0.27
CHD3-209ENST00000473376 INTUQ9ULD6 942 aa13.37□□□□□ -0.27
CHD3-209ENST00000473376 SDK2Q58EX2 2172 aa13.37□□□□□ -0.27
CHD3-209ENST00000473376 SYCE3A1L190 88 aa13.36□□□□□ -0.27
CHD3-209ENST00000473376 GOLGA6L3A6NEY3 463 aa13.36□□□□□ -0.27
CHD3-209ENST00000473376 KCNK1O00180 336 aa13.36□□□□□ -0.27
CHD3-209ENST00000473376 APOL1O14791 398 aa13.36□□□□□ -0.27
CHD3-209ENST00000473376 POLR1CO15160 346 aaPredicted RBP13.36□□□□□ -0.27
CHD3-209ENST00000473376 MTSS1O43312 755 aa13.36□□□□□ -0.27
CHD3-209ENST00000473376 ZIC2O95409 532 aaPredicted RBP13.36□□□□□ -0.27
CHD3-209ENST00000473376 NDST3O95803 873 aa13.36□□□□□ -0.27
CHD3-209ENST00000473376 ACP5P13686 325 aa13.36□□□□□ -0.27
CHD3-209ENST00000473376 ZNF8P17098 575 aaPredicted RBP13.36□□□□□ -0.27
CHD3-209ENST00000473376 PTMSP20962 102 aa13.36□□□□□ -0.27
CHD3-209ENST00000473376 HMGCLP35914 325 aa13.36□□□□□ -0.27
CHD3-209ENST00000473376 CDK18Q07002 472 aa13.36□□□□□ -0.27
CHD3-209ENST00000473376 ZBTB17Q13105 803 aa13.36□□□□□ -0.27
CHD3-209ENST00000473376 CLCA4Q14CN2 919 aa13.36□□□□□ -0.27
CHD3-209ENST00000473376 TEX44Q53QW1 395 aa13.36□□□□□ -0.27
CHD3-209ENST00000473376 TMEM26Q6ZUK4 368 aa13.36□□□□□ -0.27
CHD3-209ENST00000473376 BPHLQ86WA6 291 aaPredicted RBP13.36□□□□□ -0.27
CHD3-209ENST00000473376 ESX1Q8N693 406 aa13.36□□□□□ -0.27
CHD3-209ENST00000473376 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.36□□□□□ -0.27
CHD3-209ENST00000473376 FCRL4Q96PJ5 515 aa13.36□□□□□ -0.27
CHD3-209ENST00000473376 SPATA16Q9BXB7 569 aa13.36□□□□□ -0.27
CHD3-209ENST00000473376 GPN2Q9H9Y4 310 aaPredicted RBP13.36□□□□□ -0.27
CHD3-209ENST00000473376 SIDT1Q9NXL6 827 aaKnown RBP13.36□□□□□ -0.27
CHD3-209ENST00000473376 DDX56Q9NY93 547 aaKnown RBP13.36□□□□□ -0.27
CHD3-209ENST00000473376 IFNKQ9P0W0 207 aa13.36□□□□□ -0.27
CHD3-209ENST00000473376 KCNK6Q9Y257 313 aa13.36□□□□□ -0.27
CHD3-209ENST00000473376 PCYT1BQ9Y5K3 369 aaPredicted RBP13.36□□□□□ -0.27
CHD3-209ENST00000473376 DNMT3AQ9Y6K1 912 aaPredicted RBP13.36□□□□□ -0.27
CHD3-209ENST00000473376 BOD1L1Q8NFC6 3051 aa13.36□□□□□ -0.27
CHD3-209ENST00000473376 LRRD1A4D1F6 860 aa13.35□□□□□ -0.27
CHD3-209ENST00000473376 KLHL33A6NCF5 533 aa13.35□□□□□ -0.27
CHD3-209ENST00000473376 STK17BO94768 372 aa13.35□□□□□ -0.27
CHD3-209ENST00000473376 DLGAP3O95886 979 aa13.35□□□□□ -0.27
CHD3-209ENST00000473376 VCLP18206 1134 aa13.35□□□□□ -0.27
CHD3-209ENST00000473376 MPSTP25325 297 aa13.35□□□□□ -0.27
CHD3-209ENST00000473376 POLE2P56282 527 aa13.35□□□□□ -0.27
CHD3-209ENST00000473376 KCNAB2Q13303 367 aa13.35□□□□□ -0.27
CHD3-209ENST00000473376 NFATC2Q13469 925 aa13.35□□□□□ -0.27
CHD3-209ENST00000473376 ZFYVE27Q5T4F4 411 aa13.35□□□□□ -0.27
CHD3-209ENST00000473376 ADGRG6Q86SQ4 1221 aa13.35□□□□□ -0.27
CHD3-209ENST00000473376 LRRTM4Q86VH4 590 aa13.35□□□□□ -0.27
CHD3-209ENST00000473376 GPR26Q8NDV2 337 aa13.35□□□□□ -0.27
CHD3-209ENST00000473376 SLC35G2Q8TBE7 412 aa13.35□□□□□ -0.27
CHD3-209ENST00000473376 PMEPA1Q969W9 287 aa13.35□□□□□ -0.27
CHD3-209ENST00000473376 C9orf72Q96LT7 481 aa13.35□□□□□ -0.27
CHD3-209ENST00000473376 VAT1Q99536 393 aa13.35□□□□□ -0.27
CHD3-209ENST00000473376 ZMYND15Q9H091 742 aa13.35□□□□□ -0.27
CHD3-209ENST00000473376 OR2AG1Q9H205 316 aa13.35□□□□□ -0.27
CHD3-209ENST00000473376 DEF6Q9H4E7 631 aa13.35□□□□□ -0.27
CHD3-209ENST00000473376 ZNF768Q9H5H4 540 aaKnown RBP13.35□□□□□ -0.27
CHD3-209ENST00000473376 SLC40A1Q9NP59 571 aa13.35□□□□□ -0.27
CHD3-209ENST00000473376 KLC4Q9NSK0 619 aa13.35□□□□□ -0.27
CHD3-209ENST00000473376 HACD3Q9P035 362 aa13.35□□□□□ -0.27
CHD3-209ENST00000473376 SEMA5BQ9P283 1151 aa13.35□□□□□ -0.27
CHD3-209ENST00000473376 ANAPC2Q9UJX6 822 aa13.35□□□□□ -0.27
CHD3-209ENST00000473376 HEY1Q9Y5J3 304 aa13.35□□□□□ -0.27
CHD3-209ENST00000473376 TRBV23OR9-2A0A075B6M9 112 aa13.34□□□□□ -0.27
CHD3-209ENST00000473376 LOC285095A0A1B0GVY8 99 aa13.34□□□□□ -0.27
CHD3-209ENST00000473376 CBFA2T2O43439 604 aa13.34□□□□□ -0.27
CHD3-209ENST00000473376 AKR1B10O60218 316 aa13.34□□□□□ -0.27
CHD3-209ENST00000473376 UBXN7O94888 489 aa13.34□□□□□ -0.27
CHD3-209ENST00000473376 VIPP01282 170 aa13.34□□□□□ -0.27
CHD3-209ENST00000473376 TPM1P09493 284 aa13.34□□□□□ -0.27
CHD3-209ENST00000473376 ZNF7P17097 686 aaPredicted RBP13.34□□□□□ -0.27
CHD3-209ENST00000473376 IDSP22304 550 aa13.34□□□□□ -0.27
CHD3-209ENST00000473376 GJC1P36383 396 aa13.34□□□□□ -0.27
CHD3-209ENST00000473376 STAT5AP42229 794 aa13.34□□□□□ -0.27
CHD3-209ENST00000473376 CYP4F2P78329 520 aa13.34□□□□□ -0.27
CHD3-209ENST00000473376 DMPKQ09013 629 aa13.34□□□□□ -0.27
CHD3-209ENST00000473376 AP1B1Q10567 949 aa13.34□□□□□ -0.27
CHD3-209ENST00000473376 TFDP2Q14188 446 aa13.34□□□□□ -0.27
CHD3-209ENST00000473376 MESDQ14696 234 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms