RNA–Protein interactions for RNA: ENST00000473311.5

ABCF3-210, Transcript of ATP binding cassette subfamily F member 3, human

TSL 5

Gene ABCF3, Length 2,844 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCF3-210	ENST00000473311	CYGB	Q8WWM9	190 aa		13.91	□□□□□ -0.18
ABCF3-210	ENST00000473311	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	13.91	□□□□□ -0.18
ABCF3-210	ENST00000473311	C1orf50	Q9BV19	199 aa		13.91	□□□□□ -0.18
ABCF3-210	ENST00000473311	AGPAT4	Q9NRZ5	378 aa		13.91	□□□□□ -0.18
ABCF3-210	ENST00000473311	ACTR3B	Q9P1U1	418 aa		13.91	□□□□□ -0.18
ABCF3-210	ENST00000473311	OAZ3	Q9UMX2	235 aa		13.91	□□□□□ -0.18
ABCF3-210	ENST00000473311	ATP11B	Q9Y2G3	1177 aa		13.91	□□□□□ -0.18
ABCF3-210	ENST00000473311	PTPRD	P23468	1912 aa		13.9	□□□□□ -0.18
ABCF3-210	ENST00000473311	ZFC3H1	O60293	1989 aa	Known RBP	13.9	□□□□□ -0.18
ABCF3-210	ENST00000473311	DLGAP1	O14490	977 aa		13.9	□□□□□ -0.18
ABCF3-210	ENST00000473311	ARPC2	O15144	300 aa		13.9	□□□□□ -0.18
ABCF3-210	ENST00000473311	LDB2	O43679	373 aa		13.9	□□□□□ -0.18
ABCF3-210	ENST00000473311	CNTN5	O94779	1100 aa		13.9	□□□□□ -0.18
ABCF3-210	ENST00000473311	GOT2	P00505	430 aa	Known RBP	13.9	□□□□□ -0.18
ABCF3-210	ENST00000473311	FGF4	P08620	206 aa		13.9	□□□□□ -0.18
ABCF3-210	ENST00000473311	HSD17B1	P14061	328 aa		13.9	□□□□□ -0.18
ABCF3-210	ENST00000473311	LBP	P18428	481 aa		13.9	□□□□□ -0.18
ABCF3-210	ENST00000473311	FDXR	P22570	491 aa		13.9	□□□□□ -0.18
ABCF3-210	ENST00000473311	SLC6A2	P23975	617 aa		13.9	□□□□□ -0.18
ABCF3-210	ENST00000473311	OXA1L	Q15070	435 aa		13.9	□□□□□ -0.18
ABCF3-210	ENST00000473311	MAPRE1	Q15691	268 aa	Known RBP	13.9	□□□□□ -0.18
ABCF3-210	ENST00000473311	FBXO48	Q5FWF7	155 aa		13.9	□□□□□ -0.18
ABCF3-210	ENST00000473311	LCN8	Q6JVE9	175 aa		13.9	□□□□□ -0.18
ABCF3-210	ENST00000473311	UMODL1-AS1	Q8N2C9	162 aa		13.9	□□□□□ -0.18
ABCF3-210	ENST00000473311	ELMOD1	Q8N336	334 aa		13.9	□□□□□ -0.18
ABCF3-210	ENST00000473311	GOLM1	Q8NBJ4	401 aa		13.9	□□□□□ -0.18
ABCF3-210	ENST00000473311	PDPR	Q8NCN5	879 aa		13.9	□□□□□ -0.18
ABCF3-210	ENST00000473311	LRRC58	Q96CX6	371 aa		13.9	□□□□□ -0.18
ABCF3-210	ENST00000473311	DOK1	Q99704	481 aa		13.9	□□□□□ -0.18
ABCF3-210	ENST00000473311	C9orf16	Q9BUW7	83 aa		13.9	□□□□□ -0.18
ABCF3-210	ENST00000473311	MRO	Q9BYG7	248 aa		13.9	□□□□□ -0.18
ABCF3-210	ENST00000473311	INPP4B	O15327	924 aa		13.9	□□□□□ -0.18
ABCF3-210	ENST00000473311	CRCP	O75575	148 aa		13.9	□□□□□ -0.18
ABCF3-210	ENST00000473311	CLIC3	O95833	236 aa		13.9	□□□□□ -0.18
ABCF3-210	ENST00000473311	KRT6A	P02538	564 aa		13.9	□□□□□ -0.18
ABCF3-210	ENST00000473311	KRT6B	P04259	564 aa		13.9	□□□□□ -0.18
ABCF3-210	ENST00000473311	CYP11A1	P05108	521 aa		13.9	□□□□□ -0.18
ABCF3-210	ENST00000473311	OR4Q2	P0C623	313 aa		13.9	□□□□□ -0.18
ABCF3-210	ENST00000473311	ZNF37A	P17032	561 aa	Predicted RBP	13.9	□□□□□ -0.18
ABCF3-210	ENST00000473311	TCEA1	P23193	301 aa	Known RBP	13.9	□□□□□ -0.18
ABCF3-210	ENST00000473311	MYF6	P23409	242 aa		13.9	□□□□□ -0.18
ABCF3-210	ENST00000473311	CCL14	Q16627	93 aa		13.9	□□□□□ -0.18
ABCF3-210	ENST00000473311	CYP2A13	Q16696	494 aa		13.9	□□□□□ -0.18
ABCF3-210	ENST00000473311	ALF	Q53S48	1182 aa		13.9	□□□□□ -0.18
ABCF3-210	ENST00000473311	CMTR2	Q8IYT2	770 aa	Known RBP	13.9	□□□□□ -0.18
ABCF3-210	ENST00000473311	TNIP2	Q8NFZ5	429 aa		13.9	□□□□□ -0.18
ABCF3-210	ENST00000473311	DNAJB14	Q8TBM8	379 aa		13.9	□□□□□ -0.18
ABCF3-210	ENST00000473311	ADAMTS16	Q8TE57	1224 aa		13.9	□□□□□ -0.18
ABCF3-210	ENST00000473311	PARK7	Q99497	189 aa	Known RBP	13.9	□□□□□ -0.18
ABCF3-210	ENST00000473311	KLHL25	Q9H0H3	589 aa		13.9	□□□□□ -0.18
ABCF3-210	ENST00000473311	TUBB1	Q9H4B7	451 aa		13.9	□□□□□ -0.18
ABCF3-210	ENST00000473311	TMEM9	Q9P0T7	183 aa		13.9	□□□□□ -0.18
ABCF3-210	ENST00000473311	EBF1	Q9UH73	591 aa		13.9	□□□□□ -0.18
ABCF3-210	ENST00000473311	POLG2	Q9UHN1	485 aa		13.9	□□□□□ -0.18
ABCF3-210	ENST00000473311	TMA7	Q9Y2S6	64 aa	Known RBP	13.9	□□□□□ -0.18
ABCF3-210	ENST00000473311	ARL5A	Q9Y689	179 aa		13.9	□□□□□ -0.18
ABCF3-210	ENST00000473311		A0A1W2PQ67	120 aa		13.89	□□□□□ -0.19
ABCF3-210	ENST00000473311	WASH4P	A8MWX3	477 aa		13.89	□□□□□ -0.19
ABCF3-210	ENST00000473311		H3BMM5	538 aa		13.89	□□□□□ -0.19
ABCF3-210	ENST00000473311	TNFRSF10B	O14763	440 aa		13.89	□□□□□ -0.19
ABCF3-210	ENST00000473311	CD3EAP	O15446	510 aa	Known RBP	13.89	□□□□□ -0.19
ABCF3-210	ENST00000473311	PIRT	P0C851	137 aa		13.89	□□□□□ -0.19
ABCF3-210	ENST00000473311	UBL4A	P11441	157 aa		13.89	□□□□□ -0.19
ABCF3-210	ENST00000473311	MTHFD1	P11586	935 aa	Known RBP	13.89	□□□□□ -0.19
ABCF3-210	ENST00000473311	HOXD10	P28358	340 aa		13.89	□□□□□ -0.19
ABCF3-210	ENST00000473311	FSCN1	Q16658	493 aa	Known RBP	13.89	□□□□□ -0.19
ABCF3-210	ENST00000473311	CYP51A1	Q16850	503 aa		13.89	□□□□□ -0.19
ABCF3-210	ENST00000473311	AGAP7P	Q5VUJ5	663 aa		13.89	□□□□□ -0.19
ABCF3-210	ENST00000473311	SDHAF4	Q5VUM1	108 aa		13.89	□□□□□ -0.19
ABCF3-210	ENST00000473311	KANK2	Q63ZY3	851 aa		13.89	□□□□□ -0.19
ABCF3-210	ENST00000473311	PHYKPL	Q8IUZ5	450 aa		13.89	□□□□□ -0.19
ABCF3-210	ENST00000473311	FEM1C	Q96JP0	617 aa		13.89	□□□□□ -0.19
ABCF3-210	ENST00000473311	DCUN1D5	Q9BTE7	237 aa		13.89	□□□□□ -0.19
ABCF3-210	ENST00000473311	ZYG11B	Q9C0D3	744 aa		13.89	□□□□□ -0.19
ABCF3-210	ENST00000473311	CEP350	Q5VT06	3117 aa		13.89	□□□□□ -0.19
ABCF3-210	ENST00000473311	DOCK4	Q8N1I0	1966 aa		13.89	□□□□□ -0.19
ABCF3-210	ENST00000473311	SUPT3H	B4E1H0	165 aa		13.89	□□□□□ -0.19
ABCF3-210	ENST00000473311	GIPC1	O14908	333 aa		13.89	□□□□□ -0.19
ABCF3-210	ENST00000473311	GJB3	O75712	270 aa		13.89	□□□□□ -0.19
ABCF3-210	ENST00000473311	ITGB1	P05556	798 aa		13.89	□□□□□ -0.19
ABCF3-210	ENST00000473311	MTHFD2	P13995	350 aa		13.89	□□□□□ -0.19
ABCF3-210	ENST00000473311	KPNA1	P52294	538 aa	Predicted RBP	13.89	□□□□□ -0.19
ABCF3-210	ENST00000473311	DIO3	P55073	304 aa		13.89	□□□□□ -0.19
ABCF3-210	ENST00000473311	PURA	Q00577	322 aa	Known RBP	13.89	□□□□□ -0.19
ABCF3-210	ENST00000473311	EIF2B5	Q13144	721 aa	Known RBP	13.89	□□□□□ -0.19
ABCF3-210	ENST00000473311	MRNIP	Q6NTE8	343 aa		13.89	□□□□□ -0.19
ABCF3-210	ENST00000473311	NLRC5	Q86WI3	1866 aa		13.89	□□□□□ -0.19
ABCF3-210	ENST00000473311	HEATR4	Q86WZ0	1026 aa		13.89	□□□□□ -0.19
ABCF3-210	ENST00000473311	GRAMD2A	Q8IUY3	354 aa		13.89	□□□□□ -0.19
ABCF3-210	ENST00000473311	ADGRG5	Q8IZF4	528 aa		13.89	□□□□□ -0.19
ABCF3-210	ENST00000473311	ESX1	Q8N693	406 aa		13.89	□□□□□ -0.19
ABCF3-210	ENST00000473311	OR13C4	Q8NGS5	318 aa		13.89	□□□□□ -0.19
ABCF3-210	ENST00000473311	HPS1	Q92902	700 aa		13.89	□□□□□ -0.19
ABCF3-210	ENST00000473311	CENPN	Q96H22	339 aa	Predicted RBP	13.89	□□□□□ -0.19
ABCF3-210	ENST00000473311	MYRFL	Q96LU7	910 aa		13.89	□□□□□ -0.19
ABCF3-210	ENST00000473311	SEMA4B	Q9NPR2	832 aa	Predicted RBP	13.89	□□□□□ -0.19
ABCF3-210	ENST00000473311	UBA6	A0AVT1	1052 aa	Predicted RBP	13.88	□□□□□ -0.19
ABCF3-210	ENST00000473311		F8W810	466 aa		13.88	□□□□□ -0.19
ABCF3-210	ENST00000473311	SNAP91	O60641	907 aa		13.88	□□□□□ -0.19
ABCF3-210	ENST00000473311	NOL3	O60936	208 aa	Known RBP	13.88	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms