RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 PCNX2A6NKB5 2137 aa9.02□□□□□ -0.96
SMC4-214ENST00000472991 GLYATL1P3A0A0U1RQE8 302 aa9.02□□□□□ -0.97
SMC4-214ENST00000472991 SPTY2D1-AS1A0A0U1RR47 76 aa9.02□□□□□ -0.97
SMC4-214ENST00000472991 HEATR9A2RTY3 570 aa9.02□□□□□ -0.97
SMC4-214ENST00000472991 EFCAB8A8MWE9 144 aa9.02□□□□□ -0.97
SMC4-214ENST00000472991 CCL22O00626 93 aa9.02□□□□□ -0.97
SMC4-214ENST00000472991 GAPDHSO14556 408 aaPredicted RBP9.02□□□□□ -0.97
SMC4-214ENST00000472991 GPR39O43194 453 aa9.02□□□□□ -0.97
SMC4-214ENST00000472991 ZNF500O60304 480 aaPredicted RBP9.02□□□□□ -0.97
SMC4-214ENST00000472991 FOXD2O60548 495 aaPredicted RBP9.02□□□□□ -0.97
SMC4-214ENST00000472991 PPFIA2O75334 1257 aa9.02□□□□□ -0.97
SMC4-214ENST00000472991 AVILO75366 819 aa9.02□□□□□ -0.97
SMC4-214ENST00000472991 PYGLP06737 847 aa9.02□□□□□ -0.97
SMC4-214ENST00000472991 MYCLP1P12525 358 aaPredicted RBP9.02□□□□□ -0.97
SMC4-214ENST00000472991 IVDP26440 423 aa9.02□□□□□ -0.97
SMC4-214ENST00000472991 MGAT1P26572 445 aa9.02□□□□□ -0.97
SMC4-214ENST00000472991 TRIM23P36406 574 aa9.02□□□□□ -0.97
SMC4-214ENST00000472991 RPL21P46778 160 aaKnown RBP9.02□□□□□ -0.97
SMC4-214ENST00000472991 CRADDP78560 199 aa9.02□□□□□ -0.97
SMC4-214ENST00000472991 SARNPP82979 210 aaKnown RBP9.02□□□□□ -0.97
SMC4-214ENST00000472991 PDE1BQ01064 536 aa9.02□□□□□ -0.97
SMC4-214ENST00000472991 IL9RQ01113 521 aa9.02□□□□□ -0.97
SMC4-214ENST00000472991 PTK2BQ14289 1009 aa9.02□□□□□ -0.97
SMC4-214ENST00000472991 FZD2Q14332 565 aa9.02□□□□□ -0.97
SMC4-214ENST00000472991 ZNF423Q2M1K9 1284 aa9.02□□□□□ -0.97
SMC4-214ENST00000472991 HLA-BQ31612 363 aa9.02□□□□□ -0.97
SMC4-214ENST00000472991 ZNF542PQ5EBM4 170 aa9.02□□□□□ -0.97
SMC4-214ENST00000472991 SAMD5Q5TGI4 173 aa9.02□□□□□ -0.97
SMC4-214ENST00000472991 C8orf74Q6P047 294 aa9.02□□□□□ -0.97
SMC4-214ENST00000472991 LRRC8BQ6P9F7 803 aa9.02□□□□□ -0.97
SMC4-214ENST00000472991 DOK6Q6PKX4 331 aa9.02□□□□□ -0.97
SMC4-214ENST00000472991 IL27RAQ6UWB1 636 aa9.02□□□□□ -0.97
SMC4-214ENST00000472991 FAM151BQ6UXP7 276 aa9.02□□□□□ -0.97
SMC4-214ENST00000472991 ADAMTSL4Q6UY14 1074 aa9.02□□□□□ -0.97
SMC4-214ENST00000472991 MICALCLQ6ZW33 695 aa9.02□□□□□ -0.97
SMC4-214ENST00000472991 MAATS1Q7Z4T9 603 aa9.02□□□□□ -0.97
SMC4-214ENST00000472991 CAND1Q86VP6 1230 aaKnown RBP9.02□□□□□ -0.97
SMC4-214ENST00000472991 PARGQ86W56 976 aa9.02□□□□□ -0.97
SMC4-214ENST00000472991 DCP2Q8IU60 420 aaKnown RBP9.02□□□□□ -0.97
SMC4-214ENST00000472991 MNS1Q8NEH6 495 aa9.02□□□□□ -0.97
SMC4-214ENST00000472991 PPHLN1Q8NEY8 458 aaKnown RBP9.02□□□□□ -0.97
SMC4-214ENST00000472991 SNF8Q96H20 258 aa9.02□□□□□ -0.97
SMC4-214ENST00000472991 WDR92Q96MX6 357 aa9.02□□□□□ -0.97
SMC4-214ENST00000472991 SERPINB12Q96P63 405 aa9.02□□□□□ -0.97
SMC4-214ENST00000472991 UCN2Q96RP3 112 aa9.02□□□□□ -0.97
SMC4-214ENST00000472991 RANBP9Q96S59 729 aa9.02□□□□□ -0.97
SMC4-214ENST00000472991 ELF4Q99607 663 aaPredicted RBP9.02□□□□□ -0.97
SMC4-214ENST00000472991 ZSCAN5AQ9BUG6 496 aa9.02□□□□□ -0.97
SMC4-214ENST00000472991 TEX101Q9BY14 249 aa9.02□□□□□ -0.97
SMC4-214ENST00000472991 CDH19Q9H159 772 aa9.02□□□□□ -0.97
SMC4-214ENST00000472991 DPH5Q9H2P9 285 aa9.02□□□□□ -0.97
SMC4-214ENST00000472991 TMEM9BQ9NQ34 198 aa9.02□□□□□ -0.97
SMC4-214ENST00000472991 DNAJC28Q9NX36 388 aa9.02□□□□□ -0.97
SMC4-214ENST00000472991 SYBUQ9NX95 663 aa9.02□□□□□ -0.97
SMC4-214ENST00000472991 BFARQ9NZS9 450 aa9.02□□□□□ -0.97
SMC4-214ENST00000472991 PNMA8BQ9ULN7 279 aaPredicted RBP9.02□□□□□ -0.97
SMC4-214ENST00000472991 TCAF1Q9Y4C2 921 aa9.02□□□□□ -0.97
SMC4-214ENST00000472991 COL5A1P20908 1838 aaPredicted RBP9.02□□□□□ -0.97
SMC4-214ENST00000472991 A0A1B0GTQ1 180 aa9.01□□□□□ -0.97
SMC4-214ENST00000472991 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.01□□□□□ -0.97
SMC4-214ENST00000472991 CTAGE15A4D2H0 777 aa9.01□□□□□ -0.97
SMC4-214ENST00000472991 TMEM202A6NGA9 273 aa9.01□□□□□ -0.97
SMC4-214ENST00000472991 MROH6A6NGR9 719 aa9.01□□□□□ -0.97
SMC4-214ENST00000472991 AP3B1O00203 1094 aa9.01□□□□□ -0.97
SMC4-214ENST00000472991 CDX4O14627 284 aaPredicted RBP9.01□□□□□ -0.97
SMC4-214ENST00000472991 SCAMP1O15126 338 aa9.01□□□□□ -0.97
SMC4-214ENST00000472991 EFSO43281 561 aa9.01□□□□□ -0.97
SMC4-214ENST00000472991 SDC3O75056 442 aa9.01□□□□□ -0.97
SMC4-214ENST00000472991 SEC31AO94979 1220 aaKnown RBP9.01□□□□□ -0.97
SMC4-214ENST00000472991 PRAMEF1O95521 474 aa9.01□□□□□ -0.97
SMC4-214ENST00000472991 HOXC4P09017 264 aaPredicted RBP9.01□□□□□ -0.97
SMC4-214ENST00000472991 CTAGE8P0CG41 777 aa9.01□□□□□ -0.97
SMC4-214ENST00000472991 NME1P15531 152 aaKnown RBP9.01□□□□□ -0.97
SMC4-214ENST00000472991 KELP23276 732 aa9.01□□□□□ -0.97
SMC4-214ENST00000472991 ADRA1DP25100 572 aa9.01□□□□□ -0.97
SMC4-214ENST00000472991 HTR1BP28222 390 aa9.01□□□□□ -0.97
SMC4-214ENST00000472991 EPHA8P29322 1005 aaPredicted RBP9.01□□□□□ -0.97
SMC4-214ENST00000472991 MC4RP32245 332 aa9.01□□□□□ -0.97
SMC4-214ENST00000472991 HADHAP40939 763 aa9.01□□□□□ -0.97
SMC4-214ENST00000472991 NPY2RP49146 381 aa9.01□□□□□ -0.97
SMC4-214ENST00000472991 CCT8P50990 548 aa9.01□□□□□ -0.97
SMC4-214ENST00000472991 ITGA8P53708 1063 aa9.01□□□□□ -0.97
SMC4-214ENST00000472991 XIAPP98170 497 aa9.01□□□□□ -0.97
SMC4-214ENST00000472991 EIF2B5Q13144 721 aaKnown RBP9.01□□□□□ -0.97
SMC4-214ENST00000472991 MORF4L2Q15014 288 aa9.01□□□□□ -0.97
SMC4-214ENST00000472991 SHBQ15464 509 aa9.01□□□□□ -0.97
SMC4-214ENST00000472991 CHRNA6Q15825 494 aa9.01□□□□□ -0.97
SMC4-214ENST00000472991 UAP1L1Q3KQV9 507 aa9.01□□□□□ -0.97
SMC4-214ENST00000472991 ATP13A5Q4VNC0 1218 aa9.01□□□□□ -0.97
SMC4-214ENST00000472991 PCID2Q5JVF3 399 aa9.01□□□□□ -0.97
SMC4-214ENST00000472991 DNTTIP2Q5QJE6 756 aaKnown RBP9.01□□□□□ -0.97
SMC4-214ENST00000472991 TSTD2Q5T7W7 516 aa9.01□□□□□ -0.97
SMC4-214ENST00000472991 STPG1Q5TH74 334 aa9.01□□□□□ -0.97
SMC4-214ENST00000472991 ZDHHC20Q5W0Z9 365 aa9.01□□□□□ -0.97
SMC4-214ENST00000472991 KCTD16Q68DU8 428 aa9.01□□□□□ -0.97
SMC4-214ENST00000472991 PDPK2PQ6A1A2 396 aa9.01□□□□□ -0.97
SMC4-214ENST00000472991 ENPP7Q6UWV6 458 aa9.01□□□□□ -0.97
SMC4-214ENST00000472991 RD3Q7Z3Z2 195 aa9.01□□□□□ -0.97
SMC4-214ENST00000472991 PCGF5Q86SE9 256 aa9.01□□□□□ -0.97
SMC4-214ENST00000472991 CTAGE6Q86UF2 777 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms