RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 SLC19A1P41440 591 aa18.72■□□□□ 0.59
SORT1-203ENST00000471996 CAPZBP47756 277 aa18.72■□□□□ 0.59
SORT1-203ENST00000471996 DCUN1D2Q6PH85 259 aa18.72■□□□□ 0.59
SORT1-203ENST00000471996 RAVER1Q8IY67 606 aaKnown RBP18.72■□□□□ 0.59
SORT1-203ENST00000471996 BBS5Q8N3I7 341 aa18.72■□□□□ 0.59
SORT1-203ENST00000471996 AOPEPQ8N6M6 819 aa18.72■□□□□ 0.59
SORT1-203ENST00000471996 RSC1A1Q92681 617 aa18.72■□□□□ 0.59
SORT1-203ENST00000471996 MARVELD3Q96A59 401 aa18.72■□□□□ 0.59
SORT1-203ENST00000471996 ZDHHC12Q96GR4 267 aa18.72■□□□□ 0.59
SORT1-203ENST00000471996 CARD9Q9H257 536 aa18.72■□□□□ 0.59
SORT1-203ENST00000471996 ZNF624Q9P2J8 865 aaPredicted RBP18.72■□□□□ 0.59
SORT1-203ENST00000471996 EPHA6Q9UF33 1036 aa18.72■□□□□ 0.59
SORT1-203ENST00000471996 G3BP2Q9UN86 482 aaKnown RBP18.72■□□□□ 0.59
SORT1-203ENST00000471996 A0A0J9YYE9 177 aa18.71■□□□□ 0.59
SORT1-203ENST00000471996 SSU72P8A0A1W2PR75 194 aa18.71■□□□□ 0.59
SORT1-203ENST00000471996 ANKUB1A6NFN9 424 aa18.71■□□□□ 0.59
SORT1-203ENST00000471996 NUAK1O60285 661 aa18.71■□□□□ 0.59
SORT1-203ENST00000471996 TRBC1P01850 177 aa18.71■□□□□ 0.59
SORT1-203ENST00000471996 JAM2P57087 298 aa18.71■□□□□ 0.59
SORT1-203ENST00000471996 TUBB3Q13509 450 aa18.71■□□□□ 0.59
SORT1-203ENST00000471996 HSP90AA4PQ58FG1 418 aa18.71■□□□□ 0.59
SORT1-203ENST00000471996 FAM92BQ6ZTR7 304 aa18.71■□□□□ 0.59
SORT1-203ENST00000471996 BPHLQ86WA6 291 aaPredicted RBP18.71■□□□□ 0.59
SORT1-203ENST00000471996 TRIM48Q8IWZ4 208 aa18.71■□□□□ 0.59
SORT1-203ENST00000471996 ADAMTS17Q8TE56 1095 aa18.71■□□□□ 0.59
SORT1-203ENST00000471996 WDR24Q96S15 920 aa18.71■□□□□ 0.59
SORT1-203ENST00000471996 PEBP4Q96S96 227 aa18.71■□□□□ 0.59
SORT1-203ENST00000471996 SNRNP25Q9BV90 132 aaKnown RBP18.71■□□□□ 0.59
SORT1-203ENST00000471996 KLC4Q9NSK0 619 aa18.71■□□□□ 0.59
SORT1-203ENST00000471996 ASF1BQ9NVP2 202 aa18.71■□□□□ 0.59
SORT1-203ENST00000471996 FADS2P1A8MWK0 482 aa18.7■□□□□ 0.58
SORT1-203ENST00000471996 FOLR1P15328 257 aa18.7■□□□□ 0.58
SORT1-203ENST00000471996 HCAR3P49019 387 aa18.7■□□□□ 0.58
SORT1-203ENST00000471996 ITGA1P56199 1179 aa18.7■□□□□ 0.58
SORT1-203ENST00000471996 POLR2FP61218 127 aaKnown RBP18.7■□□□□ 0.58
SORT1-203ENST00000471996 PDE1BQ01064 536 aa18.7■□□□□ 0.58
SORT1-203ENST00000471996 DPYSQ14117 519 aa18.7■□□□□ 0.58
SORT1-203ENST00000471996 NAA30Q147X3 362 aaPredicted RBP18.7■□□□□ 0.58
SORT1-203ENST00000471996 PPP6R3Q5H9R7 873 aaPredicted RBP18.7■□□□□ 0.58
SORT1-203ENST00000471996 IRGCQ6NXR0 463 aa18.7■□□□□ 0.58
SORT1-203ENST00000471996 IQCKQ8N0W5 287 aa18.7■□□□□ 0.58
SORT1-203ENST00000471996 MLKLQ8NB16 471 aa18.7■□□□□ 0.58
SORT1-203ENST00000471996 SLC41A2Q96JW4 573 aa18.7■□□□□ 0.58
SORT1-203ENST00000471996 RANBP9Q96S59 729 aa18.7■□□□□ 0.58
SORT1-203ENST00000471996 RAB33BQ9H082 229 aa18.7■□□□□ 0.58
SORT1-203ENST00000471996 OSGEPL1Q9H4B0 414 aa18.7■□□□□ 0.58
SORT1-203ENST00000471996 CWC15Q9P013 229 aaKnown RBP18.7■□□□□ 0.58
SORT1-203ENST00000471996 SEMA5BQ9P283 1151 aa18.7■□□□□ 0.58
SORT1-203ENST00000471996 PCSK1NQ9UHG2 260 aa18.7■□□□□ 0.58
SORT1-203ENST00000471996 ENTPD4Q9Y227 616 aa18.7■□□□□ 0.58
SORT1-203ENST00000471996 POLQO75417 2590 aa18.69■□□□□ 0.58
SORT1-203ENST00000471996 ZNF185O15231 689 aa18.69■□□□□ 0.58
SORT1-203ENST00000471996 MAFKO60675 156 aa18.69■□□□□ 0.58
SORT1-203ENST00000471996 TMEM63AO94886 807 aa18.69■□□□□ 0.58
SORT1-203ENST00000471996 MMP13P45452 471 aa18.69■□□□□ 0.58
SORT1-203ENST00000471996 ZNF135P52742 658 aaPredicted RBP18.69■□□□□ 0.58
SORT1-203ENST00000471996 ELOAQ14241 798 aaKnown RBP18.69■□□□□ 0.58
SORT1-203ENST00000471996 PLEKHN1Q494U1 663 aaPredicted RBP18.69■□□□□ 0.58
SORT1-203ENST00000471996 HENMT1Q5T8I9 393 aaKnown RBP18.69■□□□□ 0.58
SORT1-203ENST00000471996 ZNF517Q6ZMY9 492 aaPredicted RBP18.69■□□□□ 0.58
SORT1-203ENST00000471996 CISD2Q8N5K1 135 aaKnown RBP18.69■□□□□ 0.58
SORT1-203ENST00000471996 ARFGAP1Q8N6T3 406 aa18.69■□□□□ 0.58
SORT1-203ENST00000471996 GLIS1Q8NBF1 620 aa18.69■□□□□ 0.58
SORT1-203ENST00000471996 SIDT2Q8NBJ9 832 aaKnown RBP18.69■□□□□ 0.58
SORT1-203ENST00000471996 SMAD5Q99717 465 aaKnown RBP18.69■□□□□ 0.58
SORT1-203ENST00000471996 FAM207AQ9NSI2 230 aaPredicted RBP18.69■□□□□ 0.58
SORT1-203ENST00000471996 POT1Q9NUX5 634 aa18.69■□□□□ 0.58
SORT1-203ENST00000471996 GPR83Q9NYM4 423 aa18.69■□□□□ 0.58
SORT1-203ENST00000471996 ATXN10Q9UBB4 475 aa18.69■□□□□ 0.58
SORT1-203ENST00000471996 DNPEPQ9ULA0 475 aa18.69■□□□□ 0.58
SORT1-203ENST00000471996 SIK3Q9Y2K2 1263 aa18.69■□□□□ 0.58
SORT1-203ENST00000471996 ADGRG1Q9Y653 693 aa18.69■□□□□ 0.58
SORT1-203ENST00000471996 IGHV5-51A0A0C4DH38 117 aa18.68■□□□□ 0.58
SORT1-203ENST00000471996 ARHGAP10A1A4S6 786 aa18.68■□□□□ 0.58
SORT1-203ENST00000471996 A6NL46 340 aa18.68■□□□□ 0.58
SORT1-203ENST00000471996 CLDN7O95471 211 aa18.68■□□□□ 0.58
SORT1-203ENST00000471996 ZNF8P17098 575 aaPredicted RBP18.68■□□□□ 0.58
SORT1-203ENST00000471996 EPHB1P54762 984 aa18.68■□□□□ 0.58
SORT1-203ENST00000471996 ACY1Q03154 408 aa18.68■□□□□ 0.58
SORT1-203ENST00000471996 KCNAB1Q14722 419 aa18.68■□□□□ 0.58
SORT1-203ENST00000471996 MARC1Q5VT66 337 aa18.68■□□□□ 0.58
SORT1-203ENST00000471996 IZUMO3Q5VZ72 239 aa18.68■□□□□ 0.58
SORT1-203ENST00000471996 NSMCE1Q8WV22 266 aa18.68■□□□□ 0.58
SORT1-203ENST00000471996 UBXN4Q92575 508 aa18.68■□□□□ 0.58
SORT1-203ENST00000471996 MR1Q95460 341 aa18.68■□□□□ 0.58
SORT1-203ENST00000471996 SLC40A1Q9NP59 571 aa18.68■□□□□ 0.58
SORT1-203ENST00000471996 NLRC4Q9NPP4 1024 aa18.68■□□□□ 0.58
SORT1-203ENST00000471996 WASH6PQ9NQA3 447 aa18.68■□□□□ 0.58
SORT1-203ENST00000471996 CPNE3O75131 537 aaKnown RBP18.67■□□□□ 0.58
SORT1-203ENST00000471996 GADD45BO75293 160 aaPredicted RBP18.67■□□□□ 0.58
SORT1-203ENST00000471996 PSMA2P25787 234 aa18.67■□□□□ 0.58
SORT1-203ENST00000471996 SPINT3P49223 89 aa18.67■□□□□ 0.58
SORT1-203ENST00000471996 KLK7P49862 253 aa18.67■□□□□ 0.58
SORT1-203ENST00000471996 SYCP1Q15431 976 aa18.67■□□□□ 0.58
SORT1-203ENST00000471996 CYP4V2Q6ZWL3 525 aaPredicted RBP18.67■□□□□ 0.58
SORT1-203ENST00000471996 PSTKQ8IV42 348 aaKnown RBP18.67■□□□□ 0.58
SORT1-203ENST00000471996 RBM12BQ8IXT5 1001 aaKnown RBP18.67■□□□□ 0.58
SORT1-203ENST00000471996 TMEM102Q8N9M5 508 aaPredicted RBP18.67■□□□□ 0.58
SORT1-203ENST00000471996 ZNF514Q96K75 400 aaPredicted RBP18.67■□□□□ 0.58
SORT1-203ENST00000471996 FAM83DQ9H4H8 585 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms