RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 KLC4Q9NSK0 619 aa22.27■■□□□ 1.16
C9orf3-213ENST00000471978 UBP1Q9NZI7 540 aa22.27■■□□□ 1.16
C9orf3-213ENST00000471978 B3GALT1Q9Y5Z6 326 aa22.27■■□□□ 1.16
C9orf3-213ENST00000471978 ADGRG1Q9Y653 693 aa22.27■■□□□ 1.16
C9orf3-213ENST00000471978 OR5K4A6NMS3 321 aa22.26■■□□□ 1.15
C9orf3-213ENST00000471978 EFCAB7A8K855 629 aa22.26■■□□□ 1.15
C9orf3-213ENST00000471978 A8MU76 341 aa22.26■■□□□ 1.15
C9orf3-213ENST00000471978 GPR89AB7ZAQ6 455 aa22.26■■□□□ 1.15
C9orf3-213ENST00000471978 CST8O60676 142 aa22.26■■□□□ 1.15
C9orf3-213ENST00000471978 GPR89BP0CG08 455 aa22.26■■□□□ 1.15
C9orf3-213ENST00000471978 MAPK9P45984 424 aa22.26■■□□□ 1.15
C9orf3-213ENST00000471978 TAZQ16635 292 aa22.26■■□□□ 1.15
C9orf3-213ENST00000471978 KAZNQ674X7 775 aa22.26■■□□□ 1.15
C9orf3-213ENST00000471978 CRTC3Q6UUV7 619 aa22.26■■□□□ 1.15
C9orf3-213ENST00000471978 ADGRG6Q86SQ4 1221 aa22.26■■□□□ 1.15
C9orf3-213ENST00000471978 SRPK1Q96SB4 655 aaKnown RBP22.26■■□□□ 1.15
C9orf3-213ENST00000471978 LDHAL6BQ9BYZ2 381 aaPredicted RBP22.26■■□□□ 1.15
C9orf3-213ENST00000471978 ASPSCR1Q9BZE9 553 aa22.26■■□□□ 1.15
C9orf3-213ENST00000471978 OSGEPL1Q9H4B0 414 aa22.26■■□□□ 1.15
C9orf3-213ENST00000471978 CPNE7Q9UBL6 633 aa22.26■■□□□ 1.15
C9orf3-213ENST00000471978 SPO11Q9Y5K1 396 aa22.26■■□□□ 1.15
C9orf3-213ENST00000471978 B4E171 279 aa22.25■■□□□ 1.15
C9orf3-213ENST00000471978 PSTPIP1O43586 416 aa22.25■■□□□ 1.15
C9orf3-213ENST00000471978 ITGB2P05107 769 aa22.25■■□□□ 1.15
C9orf3-213ENST00000471978 PECAM1P16284 738 aaPredicted RBP22.25■■□□□ 1.15
C9orf3-213ENST00000471978 BPIP17213 487 aa22.25■■□□□ 1.15
C9orf3-213ENST00000471978 WT1P19544 449 aaPredicted RBP22.25■■□□□ 1.15
C9orf3-213ENST00000471978 TSPAN7P41732 249 aa22.25■■□□□ 1.15
C9orf3-213ENST00000471978 MAGEA1P43355 309 aa22.25■■□□□ 1.15
C9orf3-213ENST00000471978 ATP1A2P50993 1020 aa22.25■■□□□ 1.15
C9orf3-213ENST00000471978 CLCNKAP51800 687 aa22.25■■□□□ 1.15
C9orf3-213ENST00000471978 EPHA4P54764 986 aa22.25■■□□□ 1.15
C9orf3-213ENST00000471978 LINC00303Q3SY05 128 aa22.25■■□□□ 1.15
C9orf3-213ENST00000471978 SPOCD1Q6ZMY3 1216 aa22.25■■□□□ 1.15
C9orf3-213ENST00000471978 EXD3Q8N9H8 876 aa22.25■■□□□ 1.15
C9orf3-213ENST00000471978 AVL9Q8NBF6 648 aa22.25■■□□□ 1.15
C9orf3-213ENST00000471978 EXTL1Q92935 676 aa22.25■■□□□ 1.15
C9orf3-213ENST00000471978 NKD1Q969G9 470 aa22.25■■□□□ 1.15
C9orf3-213ENST00000471978 ARHGAP9Q9BRR9 750 aa22.25■■□□□ 1.15
C9orf3-213ENST00000471978 ALG6Q9Y672 507 aa22.25■■□□□ 1.15
C9orf3-213ENST00000471978 SDK2Q58EX2 2172 aa22.25■■□□□ 1.15
C9orf3-213ENST00000471978 B8ZZF3 427 aa22.24■■□□□ 1.15
C9orf3-213ENST00000471978 AURKAO14965 403 aa22.24■■□□□ 1.15
C9orf3-213ENST00000471978 CHUKO15111 745 aa22.24■■□□□ 1.15
C9orf3-213ENST00000471978 CD68P34810 354 aaPredicted RBP22.24■■□□□ 1.15
C9orf3-213ENST00000471978 RAB15P59190 212 aa22.24■■□□□ 1.15
C9orf3-213ENST00000471978 WASHC5Q12768 1159 aa22.24■■□□□ 1.15
C9orf3-213ENST00000471978 INSCQ1MX18 579 aa22.24■■□□□ 1.15
C9orf3-213ENST00000471978 PLA2G4EQ3MJ16 856 aa22.24■■□□□ 1.15
C9orf3-213ENST00000471978 DCAF12Q5T6F0 453 aa22.24■■□□□ 1.15
C9orf3-213ENST00000471978 ARHGAP22Q7Z5H3 698 aa22.24■■□□□ 1.15
C9orf3-213ENST00000471978 GOLPH3Q9H4A6 298 aa22.24■■□□□ 1.15
C9orf3-213ENST00000471978 BPIFA1Q9NP55 256 aa22.24■■□□□ 1.15
C9orf3-213ENST00000471978 SLC23A2Q9UGH3 650 aa22.24■■□□□ 1.15
C9orf3-213ENST00000471978 FAM153AQ9UHL3 310 aa22.24■■□□□ 1.15
C9orf3-213ENST00000471978 SETXQ7Z333 2677 aaKnown RBP22.24■■□□□ 1.15
C9orf3-213ENST00000471978 KMOO15229 486 aa22.23■■□□□ 1.15
C9orf3-213ENST00000471978 MTX2O75431 263 aa22.23■■□□□ 1.15
C9orf3-213ENST00000471978 ZIC2O95409 532 aaPredicted RBP22.23■■□□□ 1.15
C9orf3-213ENST00000471978 NFKB1P19838 968 aa22.23■■□□□ 1.15
C9orf3-213ENST00000471978 UGT1A3P35503 534 aa22.23■■□□□ 1.15
C9orf3-213ENST00000471978 HADHBP55084 474 aaKnown RBP22.23■■□□□ 1.15
C9orf3-213ENST00000471978 UBE2IP63279 158 aaKnown RBP22.23■■□□□ 1.15
C9orf3-213ENST00000471978 CYP4F2P78329 520 aa22.23■■□□□ 1.15
C9orf3-213ENST00000471978 ADCY2Q08462 1091 aa22.23■■□□□ 1.15
C9orf3-213ENST00000471978 TFDP3Q5H9I0 405 aa22.23■■□□□ 1.15
C9orf3-213ENST00000471978 ANKS6Q68DC2 871 aa22.23■■□□□ 1.15
C9orf3-213ENST00000471978 LRRTM4Q86VH4 590 aa22.23■■□□□ 1.15
C9orf3-213ENST00000471978 ZC3H18Q86VM9 953 aaKnown RBP22.23■■□□□ 1.15
C9orf3-213ENST00000471978 IL22RA1Q8N6P7 574 aa22.23■■□□□ 1.15
C9orf3-213ENST00000471978 BMPERQ8N8U9 685 aa22.23■■□□□ 1.15
C9orf3-213ENST00000471978 P3H4Q92791 437 aa22.23■■□□□ 1.15
C9orf3-213ENST00000471978 PLEKHG4BQ96PX9 1271 aa22.23■■□□□ 1.15
C9orf3-213ENST00000471978 TBC1D10AQ9BXI6 508 aa22.23■■□□□ 1.15
C9orf3-213ENST00000471978 EPB41L1Q9H4G0 881 aa22.23■■□□□ 1.15
C9orf3-213ENST00000471978 LOC285095A0A1B0GVY8 99 aa22.22■■□□□ 1.15
C9orf3-213ENST00000471978 MTSS1O43312 755 aa22.22■■□□□ 1.15
C9orf3-213ENST00000471978 VEGFDO43915 354 aa22.22■■□□□ 1.15
C9orf3-213ENST00000471978 ZNF7P17097 686 aaPredicted RBP22.22■■□□□ 1.15
C9orf3-213ENST00000471978 TNNT3P45378 269 aaPredicted RBP22.22■■□□□ 1.15
C9orf3-213ENST00000471978 WNT3AP56704 352 aa22.22■■□□□ 1.15
C9orf3-213ENST00000471978 NOMO1Q15155 1222 aa22.22■■□□□ 1.15
C9orf3-213ENST00000471978 KDELC1Q6UW63 502 aa22.22■■□□□ 1.15
C9orf3-213ENST00000471978 XKR5Q6UX68 686 aa22.22■■□□□ 1.15
C9orf3-213ENST00000471978 TC2NQ8N9U0 490 aa22.22■■□□□ 1.15
C9orf3-213ENST00000471978 SCHIP1Q9P0W5 487 aaPredicted RBP22.22■■□□□ 1.15
C9orf3-213ENST00000471978 KLHL8Q9P2G9 620 aaPredicted RBP22.22■■□□□ 1.15
C9orf3-213ENST00000471978 KLHL3Q9UH77 587 aa22.22■■□□□ 1.15
C9orf3-213ENST00000471978 DNAJC16Q9Y2G8 782 aa22.22■■□□□ 1.15
C9orf3-213ENST00000471978 LILRA5A6NI73 299 aa22.21■■□□□ 1.15
C9orf3-213ENST00000471978 J3QKU1 62 aa22.21■■□□□ 1.15
C9orf3-213ENST00000471978 CDK14O94921 469 aa22.21■■□□□ 1.15
C9orf3-213ENST00000471978 ZRANB2O95218 330 aaKnown RBP eCLIP22.21■■□□□ 1.15
C9orf3-213ENST00000471978 XRCC1P18887 633 aaPredicted RBP22.21■■□□□ 1.15
C9orf3-213ENST00000471978 HMGCLP35914 325 aa22.21■■□□□ 1.15
C9orf3-213ENST00000471978 MC2RQ01718 297 aa22.21■■□□□ 1.15
C9orf3-213ENST00000471978 SEPT7Q16181 437 aaKnown RBP22.21■■□□□ 1.15
C9orf3-213ENST00000471978 TBR1Q16650 682 aa22.21■■□□□ 1.15
C9orf3-213ENST00000471978 KHDC1Q4VXA5 237 aaKnown RBP22.21■■□□□ 1.15
C9orf3-213ENST00000471978 SIRPB2Q5JXA9 342 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms