RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 MROH9Q5TGP6 573 aa19■□□□□ 0.63
PSPC1-203ENST00000471658 LYPLAL1Q5VWZ2 237 aa19■□□□□ 0.63
PSPC1-203ENST00000471658 DET1Q7L5Y6 550 aa19■□□□□ 0.63
PSPC1-203ENST00000471658 ADGRG6Q86SQ4 1221 aa19■□□□□ 0.63
PSPC1-203ENST00000471658 PHYKPLQ8IUZ5 450 aa19■□□□□ 0.63
PSPC1-203ENST00000471658 DDHD1Q8NEL9 900 aa19■□□□□ 0.63
PSPC1-203ENST00000471658 SLC6A18Q96N87 628 aa19■□□□□ 0.63
PSPC1-203ENST00000471658 NDNQ99608 321 aa19■□□□□ 0.63
PSPC1-203ENST00000471658 ROPN1BQ9BZX4 212 aaPredicted RBP19■□□□□ 0.63
PSPC1-203ENST00000471658 PCED1AQ9H1Q7 454 aa19■□□□□ 0.63
PSPC1-203ENST00000471658 WDR26Q9H7D7 661 aa19■□□□□ 0.63
PSPC1-203ENST00000471658 ROPN1Q9HAT0 212 aaPredicted RBP19■□□□□ 0.63
PSPC1-203ENST00000471658 EURLQ9NYK6 297 aa19■□□□□ 0.63
PSPC1-203ENST00000471658 DMTF1Q9Y222 760 aa19■□□□□ 0.63
PSPC1-203ENST00000471658 IKBKGQ9Y6K9 419 aa19■□□□□ 0.63
PSPC1-203ENST00000471658 KMT2EQ8IZD2 1858 aa18.99■□□□□ 0.63
PSPC1-203ENST00000471658 IGLV3-16A0A075B6K0 115 aa18.99■□□□□ 0.63
PSPC1-203ENST00000471658 MEI4A8MW99 385 aa18.99■□□□□ 0.63
PSPC1-203ENST00000471658 IVLP07476 585 aa18.99■□□□□ 0.63
PSPC1-203ENST00000471658 CD27P26842 260 aa18.99■□□□□ 0.63
PSPC1-203ENST00000471658 AKT1P31749 480 aa18.99■□□□□ 0.63
PSPC1-203ENST00000471658 POLD2P49005 469 aa18.99■□□□□ 0.63
PSPC1-203ENST00000471658 CSE1LP55060 971 aaKnown RBP18.99■□□□□ 0.63
PSPC1-203ENST00000471658 ITIH4Q14624 930 aa18.99■□□□□ 0.63
PSPC1-203ENST00000471658 TPRG1LQ5T0D9 272 aa18.99■□□□□ 0.63
PSPC1-203ENST00000471658 DOK6Q6PKX4 331 aa18.99■□□□□ 0.63
PSPC1-203ENST00000471658 TDRPQ86YL5 185 aa18.99■□□□□ 0.63
PSPC1-203ENST00000471658 VPS39Q96JC1 886 aa18.99■□□□□ 0.63
PSPC1-203ENST00000471658 BIRC8Q96P09 236 aa18.99■□□□□ 0.63
PSPC1-203ENST00000471658 TTC1Q99614 292 aa18.99■□□□□ 0.63
PSPC1-203ENST00000471658 MIR1-1HGQ9H1L0 117 aa18.99■□□□□ 0.63
PSPC1-203ENST00000471658 DUSP15Q9H1R2 295 aaPredicted RBP18.99■□□□□ 0.63
PSPC1-203ENST00000471658 OR2AG1Q9H205 316 aa18.99■□□□□ 0.63
PSPC1-203ENST00000471658 P2RY12Q9H244 342 aa18.99■□□□□ 0.63
PSPC1-203ENST00000471658 RHOJQ9H4E5 214 aa18.99■□□□□ 0.63
PSPC1-203ENST00000471658 VIPAS39Q9H9C1 493 aa18.99■□□□□ 0.63
PSPC1-203ENST00000471658 PSMC3IPQ9P2W1 217 aaPredicted RBP18.99■□□□□ 0.63
PSPC1-203ENST00000471658 HS3ST3A1Q9Y663 406 aa18.99■□□□□ 0.63
PSPC1-203ENST00000471658 IQCF5A8MTL0 148 aa18.98■□□□□ 0.63
PSPC1-203ENST00000471658 PYGLP06737 847 aa18.98■□□□□ 0.63
PSPC1-203ENST00000471658 ITGA2BP08514 1039 aa18.98■□□□□ 0.63
PSPC1-203ENST00000471658 ZNF7P17097 686 aaPredicted RBP18.98■□□□□ 0.63
PSPC1-203ENST00000471658 MSH3P20585 1137 aa18.98■□□□□ 0.63
PSPC1-203ENST00000471658 TEAD1P28347 426 aa18.98■□□□□ 0.63
PSPC1-203ENST00000471658 SPRP35270 261 aaPredicted RBP18.98■□□□□ 0.63
PSPC1-203ENST00000471658 LIMK2P53671 638 aa18.98■□□□□ 0.63
PSPC1-203ENST00000471658 PFN3P60673 137 aa18.98■□□□□ 0.63
PSPC1-203ENST00000471658 TMEM115Q12893 351 aaPredicted RBP18.98■□□□□ 0.63
PSPC1-203ENST00000471658 TMED2Q15363 201 aa18.98■□□□□ 0.63
PSPC1-203ENST00000471658 CTSL3PQ5NE16 218 aa18.98■□□□□ 0.63
PSPC1-203ENST00000471658 LDLRAP1Q5SW96 308 aa18.98■□□□□ 0.63
PSPC1-203ENST00000471658 GALNT7Q86SF2 657 aa18.98■□□□□ 0.63
PSPC1-203ENST00000471658 RBFAQ8N0V3 343 aa18.98■□□□□ 0.63
PSPC1-203ENST00000471658 GPATCH11Q8N954 259 aa18.98■□□□□ 0.63
PSPC1-203ENST00000471658 RASGEF1AQ8N9B8 481 aa18.98■□□□□ 0.63
PSPC1-203ENST00000471658 FOXJ1Q92949 421 aa18.98■□□□□ 0.63
PSPC1-203ENST00000471658 SGF29Q96ES7 293 aa18.98■□□□□ 0.63
PSPC1-203ENST00000471658 TRIM39Q9HCM9 518 aa18.98■□□□□ 0.63
PSPC1-203ENST00000471658 ATXN10Q9UBB4 475 aa18.98■□□□□ 0.63
PSPC1-203ENST00000471658 ZNF180Q9UJW8 692 aa18.98■□□□□ 0.63
PSPC1-203ENST00000471658 PCYT1BQ9Y5K3 369 aaPredicted RBP18.98■□□□□ 0.63
PSPC1-203ENST00000471658 TMEM202A6NGA9 273 aa18.97■□□□□ 0.63
PSPC1-203ENST00000471658 PRMT5O14744 637 aaPredicted RBP18.97■□□□□ 0.63
PSPC1-203ENST00000471658 SGTAO43765 313 aa18.97■□□□□ 0.63
PSPC1-203ENST00000471658 ASMTLO95671 621 aa18.97■□□□□ 0.63
PSPC1-203ENST00000471658 SAT1P21673 171 aa18.97■□□□□ 0.63
PSPC1-203ENST00000471658 PPARGP37231 505 aaPredicted RBP18.97■□□□□ 0.63
PSPC1-203ENST00000471658 ZNF528Q3MIS6 628 aa18.97■□□□□ 0.63
PSPC1-203ENST00000471658 RNF187Q5TA31 235 aaPredicted RBP18.97■□□□□ 0.63
PSPC1-203ENST00000471658 KCTD16Q68DU8 428 aa18.97■□□□□ 0.63
PSPC1-203ENST00000471658 Q6ZSR6 202 aa18.97■□□□□ 0.63
PSPC1-203ENST00000471658 LPCAT2Q7L5N7 544 aa18.97■□□□□ 0.63
PSPC1-203ENST00000471658 ABI3BPQ7Z7G0 1075 aa18.97■□□□□ 0.63
PSPC1-203ENST00000471658 DCLK2Q8N568 766 aa18.97■□□□□ 0.63
PSPC1-203ENST00000471658 OR13H1Q8NG92 308 aa18.97■□□□□ 0.63
PSPC1-203ENST00000471658 LKAAEAR1Q8TD35 194 aa18.97■□□□□ 0.63
PSPC1-203ENST00000471658 SCG3Q8WXD2 468 aaKnown RBP18.97■□□□□ 0.63
PSPC1-203ENST00000471658 FAM136AQ96C01 138 aa18.97■□□□□ 0.63
PSPC1-203ENST00000471658 DCUN1D1Q96GG9 259 aa18.97■□□□□ 0.63
PSPC1-203ENST00000471658 FAM126AQ9BYI3 521 aaPredicted RBP18.97■□□□□ 0.63
PSPC1-203ENST00000471658 CAB39LQ9H9S4 337 aa18.97■□□□□ 0.63
PSPC1-203ENST00000471658 AASDHPPTQ9NRN7 309 aa18.97■□□□□ 0.63
PSPC1-203ENST00000471658 PHPT1Q9NRX4 125 aaPredicted RBP18.97■□□□□ 0.63
PSPC1-203ENST00000471658 ZSCAN32Q9NX65 697 aa18.97■□□□□ 0.63
PSPC1-203ENST00000471658 FAM95CA0A1B0GW59 222 aa18.96■□□□□ 0.63
PSPC1-203ENST00000471658 PFDN6O15212 129 aa18.96■□□□□ 0.63
PSPC1-203ENST00000471658 GALR2O43603 387 aaPredicted RBP18.96■□□□□ 0.63
PSPC1-203ENST00000471658 CDH16O75309 829 aa18.96■□□□□ 0.63
PSPC1-203ENST00000471658 ATP1B2P14415 290 aaPredicted RBP18.96■□□□□ 0.63
PSPC1-203ENST00000471658 PKMP14618 531 aaKnown RBP18.96■□□□□ 0.63
PSPC1-203ENST00000471658 ZNF8P17098 575 aaPredicted RBP18.96■□□□□ 0.63
PSPC1-203ENST00000471658 ITGB6P18564 788 aa18.96■□□□□ 0.63
PSPC1-203ENST00000471658 NUDT1P36639 197 aa18.96■□□□□ 0.63
PSPC1-203ENST00000471658 NSG1P42857 185 aa18.96■□□□□ 0.63
PSPC1-203ENST00000471658 CTSCP53634 463 aa18.96■□□□□ 0.63
PSPC1-203ENST00000471658 TIAL1Q01085 375 aaKnown RBP eCLIP18.96■□□□□ 0.63
PSPC1-203ENST00000471658 PLK5Q496M5 336 aa18.96■□□□□ 0.63
PSPC1-203ENST00000471658 LAYNQ6UX15 382 aa18.96■□□□□ 0.63
PSPC1-203ENST00000471658 RGL4Q8IZJ4 473 aa18.96■□□□□ 0.63
PSPC1-203ENST00000471658 KRT222Q8N1A0 295 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms