RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 ZNF460Q14592 562 aa17.36■□□□□ 0.37
HSPG2-208ENST00000471322 ZRANB3Q5FWF4 1079 aa17.36■□□□□ 0.37
HSPG2-208ENST00000471322 DPY19L3Q6ZPD9 716 aa17.36■□□□□ 0.37
HSPG2-208ENST00000471322 CBARPQ8N350 705 aaPredicted RBP17.36■□□□□ 0.37
HSPG2-208ENST00000471322 HEXDCQ8WVB3 486 aa17.36■□□□□ 0.37
HSPG2-208ENST00000471322 CCDC126Q96EE4 140 aa17.36■□□□□ 0.37
HSPG2-208ENST00000471322 SCRN2Q96FV2 425 aa17.36■□□□□ 0.37
HSPG2-208ENST00000471322 FAM96AQ9H5X1 160 aa17.36■□□□□ 0.37
HSPG2-208ENST00000471322 POLMQ9NP87 494 aaPredicted RBP17.36■□□□□ 0.37
HSPG2-208ENST00000471322 IGSF5Q9NSI5 407 aa17.36■□□□□ 0.37
HSPG2-208ENST00000471322 KCNK4Q9NYG8 393 aa17.36■□□□□ 0.37
HSPG2-208ENST00000471322 C1orf232A0A0U1RR37 186 aa17.35■□□□□ 0.37
HSPG2-208ENST00000471322 GOLGA8CPA6NN73 597 aa17.35■□□□□ 0.37
HSPG2-208ENST00000471322 TTC34A8MYJ7 566 aa17.35■□□□□ 0.37
HSPG2-208ENST00000471322 TARM1B6A8C7 271 aa17.35■□□□□ 0.37
HSPG2-208ENST00000471322 SYNCRIPO60506 623 aaKnown RBP17.35■□□□□ 0.37
HSPG2-208ENST00000471322 SNUPNO95149 360 aaKnown RBP17.35■□□□□ 0.37
HSPG2-208ENST00000471322 WISP3O95389 354 aaPredicted RBP17.35■□□□□ 0.37
HSPG2-208ENST00000471322 CD9P21926 228 aa17.35■□□□□ 0.37
HSPG2-208ENST00000471322 GMPRP36959 345 aa17.35■□□□□ 0.37
HSPG2-208ENST00000471322 PTGER3P43115 390 aa17.35■□□□□ 0.37
HSPG2-208ENST00000471322 CDKN2DP55273 166 aa17.35■□□□□ 0.37
HSPG2-208ENST00000471322 ABCE1P61221 599 aaKnown RBP17.35■□□□□ 0.37
HSPG2-208ENST00000471322 PEX6Q13608 980 aa17.35■□□□□ 0.37
HSPG2-208ENST00000471322 ITGA9Q13797 1035 aa17.35■□□□□ 0.37
HSPG2-208ENST00000471322 CDKN3Q16667 212 aa17.35■□□□□ 0.37
HSPG2-208ENST00000471322 LYPLAL1Q5VWZ2 237 aa17.35■□□□□ 0.37
HSPG2-208ENST00000471322 LIPMQ5VYY2 423 aa17.35■□□□□ 0.37
HSPG2-208ENST00000471322 ZNF549Q6P9A3 640 aa17.35■□□□□ 0.37
HSPG2-208ENST00000471322 GDPD4Q6W3E5 623 aa17.35■□□□□ 0.37
HSPG2-208ENST00000471322 ZCCHC23Q6ZST2 131 aa17.35■□□□□ 0.37
HSPG2-208ENST00000471322 TMEM151AQ8N4L1 468 aa17.35■□□□□ 0.37
HSPG2-208ENST00000471322 CAMKK1Q8N5S9 505 aa17.35■□□□□ 0.37
HSPG2-208ENST00000471322 RLN3Q8WXF3 142 aa17.35■□□□□ 0.37
HSPG2-208ENST00000471322 THOC1Q96FV9 657 aaKnown RBP17.35■□□□□ 0.37
HSPG2-208ENST00000471322 LRIG1Q96JA1 1093 aa17.35■□□□□ 0.37
HSPG2-208ENST00000471322 MRGPRX3Q96LB0 322 aa17.35■□□□□ 0.37
HSPG2-208ENST00000471322 LRRC37BQ96QE4 947 aa17.35■□□□□ 0.37
HSPG2-208ENST00000471322 HEPHQ9BQS7 1158 aa17.35■□□□□ 0.37
HSPG2-208ENST00000471322 TMEM245Q9H330 911 aa17.35■□□□□ 0.37
HSPG2-208ENST00000471322 ZDHHC6Q9H6R6 413 aa17.35■□□□□ 0.37
HSPG2-208ENST00000471322 SYTL2Q9HCH5 934 aa17.35■□□□□ 0.37
HSPG2-208ENST00000471322 BPIFA1Q9NP55 256 aa17.35■□□□□ 0.37
HSPG2-208ENST00000471322 TAS2R13Q9NYV9 303 aa17.35■□□□□ 0.37
HSPG2-208ENST00000471322 CPSF2Q9P2I0 782 aaKnown RBP17.35■□□□□ 0.37
HSPG2-208ENST00000471322 DCTN4Q9UJW0 460 aa17.35■□□□□ 0.37
HSPG2-208ENST00000471322 UBA6A0AVT1 1052 aaPredicted RBP17.34■□□□□ 0.37
HSPG2-208ENST00000471322 AXIN1O15169 862 aa17.34■□□□□ 0.37
HSPG2-208ENST00000471322 HRO43593 1189 aa17.34■□□□□ 0.37
HSPG2-208ENST00000471322 BNIP3LO60238 219 aa17.34■□□□□ 0.37
HSPG2-208ENST00000471322 SRP72O76094 671 aaKnown RBP17.34■□□□□ 0.37
HSPG2-208ENST00000471322 PYGLP06737 847 aa17.34■□□□□ 0.37
HSPG2-208ENST00000471322 CCDC166P0CW27 439 aa17.34■□□□□ 0.37
HSPG2-208ENST00000471322 GABRG2P18507 467 aa17.34■□□□□ 0.37
HSPG2-208ENST00000471322 ST8SIA6P61647 398 aa17.34■□□□□ 0.37
HSPG2-208ENST00000471322 XIAPP98170 497 aa17.34■□□□□ 0.37
HSPG2-208ENST00000471322 ENPP2Q13822 863 aa17.34■□□□□ 0.37
HSPG2-208ENST00000471322 CSHL1Q14406 222 aa17.34■□□□□ 0.37
HSPG2-208ENST00000471322 STARD3Q14849 445 aa17.34■□□□□ 0.37
HSPG2-208ENST00000471322 LPAL2Q16609 132 aa17.34■□□□□ 0.37
HSPG2-208ENST00000471322 SPDYAQ5MJ70 313 aa17.34■□□□□ 0.37
HSPG2-208ENST00000471322 ZDHHC20Q5W0Z9 365 aa17.34■□□□□ 0.37
HSPG2-208ENST00000471322 BRAT1Q6PJG6 821 aa17.34■□□□□ 0.37
HSPG2-208ENST00000471322 LONP2Q86WA8 852 aa17.34■□□□□ 0.37
HSPG2-208ENST00000471322 WDR75Q8IWA0 830 aaKnown RBP17.34■□□□□ 0.37
HSPG2-208ENST00000471322 FRMD1Q8N878 549 aa17.34■□□□□ 0.37
HSPG2-208ENST00000471322 ZBTB44Q8NCP5 570 aa17.34■□□□□ 0.37
HSPG2-208ENST00000471322 OR2A12Q8NGT7 310 aa17.34■□□□□ 0.37
HSPG2-208ENST00000471322 RFWD2Q8NHY2 731 aa17.34■□□□□ 0.37
HSPG2-208ENST00000471322 HCAR2Q8TDS4 363 aa17.34■□□□□ 0.37
HSPG2-208ENST00000471322 NELL1Q92832 810 aa17.34■□□□□ 0.37
HSPG2-208ENST00000471322 RMDN2Q96LZ7 410 aa17.34■□□□□ 0.37
HSPG2-208ENST00000471322 MCCC1Q96RQ3 725 aaPredicted RBP17.34■□□□□ 0.37
HSPG2-208ENST00000471322 OSBPL1AQ9BXW6 950 aa17.34■□□□□ 0.37
HSPG2-208ENST00000471322 MKRN2Q9H000 416 aaKnown RBP17.34■□□□□ 0.37
HSPG2-208ENST00000471322 CD248Q9HCU0 757 aa17.34■□□□□ 0.37
HSPG2-208ENST00000471322 CD93Q9NPY3 652 aa17.34■□□□□ 0.37
HSPG2-208ENST00000471322 ABCF3Q9NUQ8 709 aa17.34■□□□□ 0.37
HSPG2-208ENST00000471322 XPR1Q9UBH6 696 aa17.34■□□□□ 0.37
HSPG2-208ENST00000471322 PCDHGA2Q9Y5H1 932 aa17.34■□□□□ 0.37
HSPG2-208ENST00000471322 A0A0G2JND7 137 aa17.33■□□□□ 0.37
HSPG2-208ENST00000471322 NDUFV2P19404 249 aa17.33■□□□□ 0.37
HSPG2-208ENST00000471322 ATP5F1P24539 256 aaPredicted RBP17.33■□□□□ 0.37
HSPG2-208ENST00000471322 GLRBP48167 497 aa17.33■□□□□ 0.37
HSPG2-208ENST00000471322 DLG1Q12959 904 aa17.33■□□□□ 0.37
HSPG2-208ENST00000471322 PDAP1Q13442 181 aaKnown RBP17.33■□□□□ 0.37
HSPG2-208ENST00000471322 CES4AQ5XG92 561 aa17.33■□□□□ 0.37
HSPG2-208ENST00000471322 Q6ZVU0 165 aa17.33■□□□□ 0.37
HSPG2-208ENST00000471322 TAS2R42Q7RTR8 314 aa17.33■□□□□ 0.37
HSPG2-208ENST00000471322 FAM160A2Q8N612 972 aaPredicted RBP17.33■□□□□ 0.37
HSPG2-208ENST00000471322 KDM1BQ8NB78 822 aa17.33■□□□□ 0.37
HSPG2-208ENST00000471322 PIWIL2Q8TC59 973 aaKnown RBP17.33■□□□□ 0.37
HSPG2-208ENST00000471322 FRS2Q8WU20 508 aa17.33■□□□□ 0.37
HSPG2-208ENST00000471322 EID2BQ96D98 161 aa17.33■□□□□ 0.37
HSPG2-208ENST00000471322 FAM126AQ9BYI3 521 aaPredicted RBP17.33■□□□□ 0.37
HSPG2-208ENST00000471322 IRF2BPLQ9H1B7 796 aa17.33■□□□□ 0.37
HSPG2-208ENST00000471322 DNAH14Q0VDD8 3507 aa17.33■□□□□ 0.37
HSPG2-208ENST00000471322 F8W8V4 182 aa17.32■□□□□ 0.36
HSPG2-208ENST00000471322 TK2O00142 265 aa17.32■□□□□ 0.36
HSPG2-208ENST00000471322 DNAJC6O75061 913 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms