RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 WNT9AO14904 365 aa9.29□□□□□ -0.92
VPS52-216ENST00000471309 ZBTB14O43829 449 aa9.29□□□□□ -0.92
VPS52-216ENST00000471309 DLX3O60479 287 aa9.29□□□□□ -0.92
VPS52-216ENST00000471309 SNUPNO95149 360 aaKnown RBP9.29□□□□□ -0.92
VPS52-216ENST00000471309 TSPAN12O95859 305 aa9.29□□□□□ -0.92
VPS52-216ENST00000471309 ADH1BP00325 375 aa9.29□□□□□ -0.92
VPS52-216ENST00000471309 GM2AP17900 193 aa9.29□□□□□ -0.92
VPS52-216ENST00000471309 CHRM3P20309 590 aa9.29□□□□□ -0.92
VPS52-216ENST00000471309 DRD1P21728 446 aa9.29□□□□□ -0.92
VPS52-216ENST00000471309 SERPINB5P36952 375 aa9.29□□□□□ -0.92
VPS52-216ENST00000471309 ETV3P41162 512 aa9.29□□□□□ -0.92
VPS52-216ENST00000471309 SLC1A6P48664 564 aa9.29□□□□□ -0.92
VPS52-216ENST00000471309 LIG3P49916 1009 aa9.29□□□□□ -0.92
VPS52-216ENST00000471309 NUBP1P53384 320 aa9.29□□□□□ -0.92
VPS52-216ENST00000471309 METAP1P53582 386 aa9.29□□□□□ -0.92
VPS52-216ENST00000471309 ABCE1P61221 599 aaKnown RBP9.29□□□□□ -0.92
VPS52-216ENST00000471309 CREB5Q02930 508 aa9.29□□□□□ -0.92
VPS52-216ENST00000471309 OVGP1Q12889 678 aa9.29□□□□□ -0.92
VPS52-216ENST00000471309 CRY1Q16526 586 aa9.29□□□□□ -0.92
VPS52-216ENST00000471309 ZNF284Q2VY69 593 aa9.29□□□□□ -0.92
VPS52-216ENST00000471309 TMEM52BQ4KMG9 183 aa9.29□□□□□ -0.92
VPS52-216ENST00000471309 GPRC6AQ5T6X5 926 aa9.29□□□□□ -0.92
VPS52-216ENST00000471309 PTRHD1Q6GMV3 140 aaKnown RBP9.29□□□□□ -0.92
VPS52-216ENST00000471309 TXNDC11Q6PKC3 985 aa9.29□□□□□ -0.92
VPS52-216ENST00000471309 PAQR3Q6TCH7 311 aa9.29□□□□□ -0.92
VPS52-216ENST00000471309 Q6ZVL8 140 aa9.29□□□□□ -0.92
VPS52-216ENST00000471309 YTHDF3Q7Z739 585 aaKnown RBP9.29□□□□□ -0.92
VPS52-216ENST00000471309 ISCA2Q86U28 154 aa9.29□□□□□ -0.92
VPS52-216ENST00000471309 MMAAQ8IVH4 418 aaKnown RBP9.29□□□□□ -0.92
VPS52-216ENST00000471309 SLC22A9Q8IVM8 553 aa9.29□□□□□ -0.92
VPS52-216ENST00000471309 SIDT2Q8NBJ9 832 aaKnown RBP9.29□□□□□ -0.92
VPS52-216ENST00000471309 DDHD1Q8NEL9 900 aa9.29□□□□□ -0.92
VPS52-216ENST00000471309 PPP4R1Q8TF05 950 aa9.29□□□□□ -0.92
VPS52-216ENST00000471309 C10orf82Q8WW14 230 aa9.29□□□□□ -0.92
VPS52-216ENST00000471309 SCAMP4Q969E2 229 aa9.29□□□□□ -0.92
VPS52-216ENST00000471309 KIAA1191Q96A73 305 aa9.29□□□□□ -0.92
VPS52-216ENST00000471309 PTERQ96BW5 349 aa9.29□□□□□ -0.92
VPS52-216ENST00000471309 CCDC97Q96F63 343 aaPredicted RBP9.29□□□□□ -0.92
VPS52-216ENST00000471309 DTD2Q96FN9 168 aa9.29□□□□□ -0.92
VPS52-216ENST00000471309 MSANTD3Q96H12 275 aa9.29□□□□□ -0.92
VPS52-216ENST00000471309 FAM161BQ96MY7 647 aa9.29□□□□□ -0.92
VPS52-216ENST00000471309 PANX3Q96QZ0 392 aa9.29□□□□□ -0.92
VPS52-216ENST00000471309 PHF7Q9BWX1 381 aaPredicted RBP9.29□□□□□ -0.92
VPS52-216ENST00000471309 SPATA16Q9BXB7 569 aa9.29□□□□□ -0.92
VPS52-216ENST00000471309 UNKQ9C0B0 810 aaKnown RBP9.29□□□□□ -0.92
VPS52-216ENST00000471309 FBRSQ9HAH7 460 aa9.29□□□□□ -0.92
VPS52-216ENST00000471309 KCNK12Q9HB15 430 aa9.29□□□□□ -0.92
VPS52-216ENST00000471309 NPHS2Q9NP85 383 aa9.29□□□□□ -0.92
VPS52-216ENST00000471309 ZDHHC4Q9NPG8 344 aa9.29□□□□□ -0.92
VPS52-216ENST00000471309 KLHL42Q9P2K6 505 aa9.29□□□□□ -0.92
VPS52-216ENST00000471309 CD84Q9UIB8 345 aa9.29□□□□□ -0.92
VPS52-216ENST00000471309 DHRS7Q9Y394 339 aa9.29□□□□□ -0.92
VPS52-216ENST00000471309 USH1CQ9Y6N9 552 aa9.29□□□□□ -0.92
VPS52-216ENST00000471309 PIAS3Q9Y6X2 628 aa9.29□□□□□ -0.92
VPS52-216ENST00000471309 RANBP2P49792 3224 aaKnown RBP9.29□□□□□ -0.92
VPS52-216ENST00000471309 LAMA2P24043 3122 aaKnown RBP9.29□□□□□ -0.92
VPS52-216ENST00000471309 ANTXRLA6NF34 631 aa9.28□□□□□ -0.92
VPS52-216ENST00000471309 FADS2P1A8MWK0 482 aa9.28□□□□□ -0.92
VPS52-216ENST00000471309 CFAP99D6REC4 459 aa9.28□□□□□ -0.92
VPS52-216ENST00000471309 EIF3FO00303 357 aaPredicted RBP9.28□□□□□ -0.92
VPS52-216ENST00000471309 ITM2AO43736 263 aa9.28□□□□□ -0.92
VPS52-216ENST00000471309 AP1G1O43747 822 aa9.28□□□□□ -0.92
VPS52-216ENST00000471309 NPHS1O60500 1241 aa9.28□□□□□ -0.92
VPS52-216ENST00000471309 SYNCRIPO60506 623 aaKnown RBP9.28□□□□□ -0.92
VPS52-216ENST00000471309 RNASEH1O60930 286 aaKnown RBP9.28□□□□□ -0.92
VPS52-216ENST00000471309 KERAO60938 352 aa9.28□□□□□ -0.92
VPS52-216ENST00000471309 IPO13O94829 963 aaKnown RBP9.28□□□□□ -0.92
VPS52-216ENST00000471309 AP2A2O94973 939 aa9.28□□□□□ -0.92
VPS52-216ENST00000471309 HSPA4LO95757 839 aa9.28□□□□□ -0.92
VPS52-216ENST00000471309 C6P13671 934 aa9.28□□□□□ -0.92
VPS52-216ENST00000471309 GLULP15104 373 aa9.28□□□□□ -0.92
VPS52-216ENST00000471309 C5AR1P21730 350 aa9.28□□□□□ -0.92
VPS52-216ENST00000471309 NTSR1P30989 418 aa9.28□□□□□ -0.92
VPS52-216ENST00000471309 ARRB2P32121 409 aa9.28□□□□□ -0.92
VPS52-216ENST00000471309 DRD3P35462 400 aa9.28□□□□□ -0.92
VPS52-216ENST00000471309 P2RY2P41231 377 aa9.28□□□□□ -0.92
VPS52-216ENST00000471309 HK2P52789 917 aa9.28□□□□□ -0.92
VPS52-216ENST00000471309 SEC13P55735 322 aa9.28□□□□□ -0.92
VPS52-216ENST00000471309 IL2P60568 153 aa9.28□□□□□ -0.92
VPS52-216ENST00000471309 B4GALNT1Q00973 533 aa9.28□□□□□ -0.92
VPS52-216ENST00000471309 SATB1Q01826 763 aa9.28□□□□□ -0.92
VPS52-216ENST00000471309 RCN2Q14257 317 aa9.28□□□□□ -0.92
VPS52-216ENST00000471309 ACOX1Q15067 660 aa9.28□□□□□ -0.92
VPS52-216ENST00000471309 SMAD2Q15796 467 aaKnown RBP9.28□□□□□ -0.92
VPS52-216ENST00000471309 CST6Q15828 149 aa9.28□□□□□ -0.92
VPS52-216ENST00000471309 TMEM196Q5HYL7 178 aa9.28□□□□□ -0.92
VPS52-216ENST00000471309 PIP5KL1Q5T9C9 394 aa9.28□□□□□ -0.92
VPS52-216ENST00000471309 ZNF776Q68DI1 518 aaPredicted RBP9.28□□□□□ -0.92
VPS52-216ENST00000471309 NAPRTQ6XQN6 538 aa9.28□□□□□ -0.92
VPS52-216ENST00000471309 PIWIL4Q7Z3Z4 852 aaKnown RBP9.28□□□□□ -0.92
VPS52-216ENST00000471309 TRMT11Q7Z4G4 463 aaKnown RBP9.28□□□□□ -0.92
VPS52-216ENST00000471309 CPNE9Q8IYJ1 553 aa9.28□□□□□ -0.92
VPS52-216ENST00000471309 SLC44A3Q8N4M1 653 aa9.28□□□□□ -0.92
VPS52-216ENST00000471309 TXNDC5Q8NBS9 432 aaKnown RBP9.28□□□□□ -0.92
VPS52-216ENST00000471309 PIWIL2Q8TC59 973 aaKnown RBP9.28□□□□□ -0.92
VPS52-216ENST00000471309 INPP5DQ92835 1189 aa9.28□□□□□ -0.92
VPS52-216ENST00000471309 FAM136AQ96C01 138 aa9.28□□□□□ -0.92
VPS52-216ENST00000471309 AP2M1Q96CW1 435 aa9.28□□□□□ -0.92
VPS52-216ENST00000471309 NUS1Q96E22 293 aa9.28□□□□□ -0.92
VPS52-216ENST00000471309 SGF29Q96ES7 293 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms