RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 C15orf39Q6ZRI6 1047 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 SEPT14Q6ZU15 432 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 PLEKHM3Q6ZWE6 761 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 Q75L30 129 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 ANO5Q75V66 913 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 GSTA5Q7RTV2 222 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 PIWIL4Q7Z3Z4 852 aaKnown RBP1.35□□□□□ -2.19
UBXN4-207ENST00000471246 TRPT1Q86TN4 253 aaKnown RBP1.35□□□□□ -2.19
UBXN4-207ENST00000471246 LONP2Q86WA8 852 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 ZNF354CQ86Y25 554 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 ARMC8Q8IUR7 673 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 ADAD2Q8NCV1 583 aaKnown RBP1.35□□□□□ -2.19
UBXN4-207ENST00000471246 RBM15BQ8NDT2 890 aaKnown RBP1.35□□□□□ -2.19
UBXN4-207ENST00000471246 OR1J2Q8NGS2 313 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 METTL6Q8TCB7 284 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 FCAMRQ8WWV6 532 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 ZUFSPQ96AP4 578 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 PHF21AQ96BD5 680 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 INTS12Q96CB8 462 aaKnown RBP1.35□□□□□ -2.19
UBXN4-207ENST00000471246 ARHGEF26Q96DR7 871 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 MMABQ96EY8 250 aaPredicted RBP1.35□□□□□ -2.19
UBXN4-207ENST00000471246 OXNAD1Q96HP4 312 aaPredicted RBP1.35□□□□□ -2.19
UBXN4-207ENST00000471246 TMEM68Q96MH6 324 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 NEUROD6Q96NK8 337 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 SMC6Q96SB8 1091 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 STRA6Q9BX79 667 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 MOV10L1Q9BXT6 1211 aaKnown RBP1.35□□□□□ -2.19
UBXN4-207ENST00000471246 EGLN1Q9GZT9 426 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 PAIP1Q9H074 479 aaKnown RBP1.35□□□□□ -2.19
UBXN4-207ENST00000471246 LRMDAQ9H2I8 198 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 PIGMQ9H3S5 423 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 TAS2R10Q9NYW0 307 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 CWC15Q9P013 229 aaKnown RBP1.35□□□□□ -2.19
UBXN4-207ENST00000471246 KLHL9Q9P2J3 617 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 PDP2Q9P2J9 529 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 COPG2Q9UBF2 871 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 OR14J1Q9UGF5 321 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 SLC13A4Q9UKG4 626 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 NAALADL1Q9UQQ1 740 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 CLIC4Q9Y696 253 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 KIAA1210Q9ULL0 1709 aa1.35□□□□□ -2.19
UBXN4-207ENST00000471246 A0A1W2PPI3 338 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 A0A1W2PQF6 199 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 A0A1W2PRG0 241 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 KANSL1LA0AUZ9 987 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 C5orf60A6NFR6 353 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 A6NLC8 198 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 ERI2A8K979 691 aaKnown RBP1.34□□□□□ -2.19
UBXN4-207ENST00000471246 ANKRD66B4E2M5 251 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 H3BQ06 376 aaPredicted RBP1.34□□□□□ -2.19
UBXN4-207ENST00000471246 MAP2K7O14733 419 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 TGFB1I1O43294 461 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 BUD23O43709 281 aaKnown RBP1.34□□□□□ -2.19
UBXN4-207ENST00000471246 WISP2O76076 250 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 IPO7O95373 1038 aaKnown RBP1.34□□□□□ -2.19
UBXN4-207ENST00000471246 TSHBP01222 138 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 NR3C1P04150 777 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 ICAM1P05362 532 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 PYGLP06737 847 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 PRSS56P0CW18 603 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 RNF224P0DH78 156 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 ERVK-10P10266 1014 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 AZU1P20160 251 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 CHRNB4P30926 498 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 HOXC8P31273 242 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 PBX3P40426 434 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 RGS2P41220 211 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 ARCN1P48444 511 aaKnown RBP1.34□□□□□ -2.19
UBXN4-207ENST00000471246 NR2C2P49116 596 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 MLLT10P55197 1068 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 RPL7AP62424 266 aaKnown RBP1.34□□□□□ -2.19
UBXN4-207ENST00000471246 GNB1P62873 340 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 MRPS34P82930 218 aaKnown RBP1.34□□□□□ -2.19
UBXN4-207ENST00000471246 MBTD1Q05BQ5 628 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 SPOCK1Q08629 439 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 TMEM115Q12893 351 aaPredicted RBP1.34□□□□□ -2.19
UBXN4-207ENST00000471246 CSTF3Q12996 717 aaKnown RBP1.34□□□□□ -2.19
UBXN4-207ENST00000471246 CDC16Q13042 620 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 KIR2DS3Q14952 304 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 PNLIPRP3Q17RR3 467 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 DPCR1Q3MIW9 517 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 ZC2HC1CQ53FD0 456 aaPredicted RBP1.34□□□□□ -2.19
UBXN4-207ENST00000471246 RAB6CQ53S08 254 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 ZNF805Q5CZA5 627 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 ZC2HC1BQ5TFG8 222 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 ACAD10Q6JQN1 1059 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 LCN10Q6JVE6 187 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 FAM53AQ6NSI3 398 aaPredicted RBP1.34□□□□□ -2.19
UBXN4-207ENST00000471246 PLXDC2Q6UX71 529 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 PACS1Q6VY07 963 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 ZNF497Q6ZNH5 498 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 NOTCH2NLQ7Z3S9 236 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 SDCCAG8Q86SQ7 713 aaPredicted RBP1.34□□□□□ -2.19
UBXN4-207ENST00000471246 MYPOPQ86VE0 399 aaPredicted RBP1.34□□□□□ -2.19
UBXN4-207ENST00000471246 PM20D2Q8IYS1 436 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 UTP15Q8TED0 518 aaKnown RBP1.34□□□□□ -2.19
UBXN4-207ENST00000471246 PPP4R1Q8TF05 950 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 DNAAF4Q8WXU2 420 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 SMARCE1Q969G3 411 aa1.34□□□□□ -2.19
UBXN4-207ENST00000471246 FAM149B1Q96BN6 582 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms