RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 MAZP56270 477 aaKnown RBP9.02□□□□□ -0.97
SF3A1-206ENST00000471037 OR1D5P58170 312 aa9.02□□□□□ -0.97
SF3A1-206ENST00000471037 CYP4F2P78329 520 aa9.02□□□□□ -0.97
SF3A1-206ENST00000471037 IL10RBQ08334 325 aa9.02□□□□□ -0.97
SF3A1-206ENST00000471037 AP1B1Q10567 949 aa9.02□□□□□ -0.97
SF3A1-206ENST00000471037 ILF3Q12906 894 aaKnown RBP eCLIP9.02□□□□□ -0.97
SF3A1-206ENST00000471037 SQSTM1Q13501 440 aa9.02□□□□□ -0.97
SF3A1-206ENST00000471037 CLCA4Q14CN2 919 aa9.02□□□□□ -0.97
SF3A1-206ENST00000471037 TEX35Q5T0J7 233 aa9.02□□□□□ -0.97
SF3A1-206ENST00000471037 GSTA5Q7RTV2 222 aa9.02□□□□□ -0.97
SF3A1-206ENST00000471037 CCDC13Q8IYE1 715 aa9.02□□□□□ -0.97
SF3A1-206ENST00000471037 CCDC89Q8N998 374 aa9.02□□□□□ -0.97
SF3A1-206ENST00000471037 CCNYQ8ND76 341 aa9.02□□□□□ -0.97
SF3A1-206ENST00000471037 LRRN4CLQ8ND94 238 aa9.02□□□□□ -0.97
SF3A1-206ENST00000471037 CCHCR1Q8TD31 782 aa9.02□□□□□ -0.97
SF3A1-206ENST00000471037 ZDHHC1Q8WTX9 485 aa9.02□□□□□ -0.97
SF3A1-206ENST00000471037 UBXN4Q92575 508 aa9.02□□□□□ -0.97
SF3A1-206ENST00000471037 NKD1Q969G9 470 aa9.02□□□□□ -0.97
SF3A1-206ENST00000471037 RTP4Q96DX8 246 aa9.02□□□□□ -0.97
SF3A1-206ENST00000471037 PSKH2Q96QS6 385 aa9.02□□□□□ -0.97
SF3A1-206ENST00000471037 TAAR9Q96RI9 348 aa9.02□□□□□ -0.97
SF3A1-206ENST00000471037 VAT1Q99536 393 aa9.02□□□□□ -0.97
SF3A1-206ENST00000471037 NUDT22Q9BRQ3 303 aa9.02□□□□□ -0.97
SF3A1-206ENST00000471037 TMEM121Q9BTD3 319 aa9.02□□□□□ -0.97
SF3A1-206ENST00000471037 CINPQ9BW66 212 aaPredicted RBP9.02□□□□□ -0.97
SF3A1-206ENST00000471037 TEX101Q9BY14 249 aa9.02□□□□□ -0.97
SF3A1-206ENST00000471037 GSDMCQ9BYG8 508 aa9.02□□□□□ -0.97
SF3A1-206ENST00000471037 FRMD8Q9BZ67 464 aaPredicted RBP9.02□□□□□ -0.97
SF3A1-206ENST00000471037 RAB17Q9H0T7 212 aa9.02□□□□□ -0.97
SF3A1-206ENST00000471037 CDH19Q9H159 772 aa9.02□□□□□ -0.97
SF3A1-206ENST00000471037 CARS2Q9HA77 564 aaKnown RBP9.02□□□□□ -0.97
SF3A1-206ENST00000471037 PCDH9Q9HC56 1237 aa9.02□□□□□ -0.97
SF3A1-206ENST00000471037 PHPT1Q9NRX4 125 aaPredicted RBP9.02□□□□□ -0.97
SF3A1-206ENST00000471037 TAAR2Q9P1P5 351 aa9.02□□□□□ -0.97
SF3A1-206ENST00000471037 B4GALT6Q9UBX8 382 aa9.02□□□□□ -0.97
SF3A1-206ENST00000471037 AMACRQ9UHK6 382 aa9.02□□□□□ -0.97
SF3A1-206ENST00000471037 TUBD1Q9UJT1 453 aa9.02□□□□□ -0.97
SF3A1-206ENST00000471037 UNC13CQ8NB66 2214 aa9.02□□□□□ -0.97
SF3A1-206ENST00000471037 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.01□□□□□ -0.97
SF3A1-206ENST00000471037 A0A1W2PQ67 120 aa9.01□□□□□ -0.97
SF3A1-206ENST00000471037 RHPN2P1A8MT19 583 aa9.01□□□□□ -0.97
SF3A1-206ENST00000471037 AGRPO00253 132 aa9.01□□□□□ -0.97
SF3A1-206ENST00000471037 KCNN4O15554 427 aa9.01□□□□□ -0.97
SF3A1-206ENST00000471037 TTI1O43156 1089 aa9.01□□□□□ -0.97
SF3A1-206ENST00000471037 HTRA2O43464 458 aaPredicted RBP9.01□□□□□ -0.97
SF3A1-206ENST00000471037 RAD51CO43502 376 aa9.01□□□□□ -0.97
SF3A1-206ENST00000471037 MAFKO60675 156 aa9.01□□□□□ -0.97
SF3A1-206ENST00000471037 SOCS5O75159 536 aa9.01□□□□□ -0.97
SF3A1-206ENST00000471037 FUCA1P04066 466 aa9.01□□□□□ -0.97
SF3A1-206ENST00000471037 CEACAM5P06731 702 aa9.01□□□□□ -0.97
SF3A1-206ENST00000471037 THRAP10827 490 aa9.01□□□□□ -0.97
SF3A1-206ENST00000471037 FGF3P11487 239 aaPredicted RBP9.01□□□□□ -0.97
SF3A1-206ENST00000471037 TEAD1P28347 426 aa9.01□□□□□ -0.97
SF3A1-206ENST00000471037 RBL1P28749 1068 aa9.01□□□□□ -0.97
SF3A1-206ENST00000471037 CD1CP29017 333 aa9.01□□□□□ -0.97
SF3A1-206ENST00000471037 ALDH4A1P30038 563 aa9.01□□□□□ -0.97
SF3A1-206ENST00000471037 RENBPP51606 427 aa9.01□□□□□ -0.97
SF3A1-206ENST00000471037 LIMK2P53671 638 aa9.01□□□□□ -0.97
SF3A1-206ENST00000471037 TLE1Q04724 770 aa9.01□□□□□ -0.97
SF3A1-206ENST00000471037 PEX6Q13608 980 aa9.01□□□□□ -0.97
SF3A1-206ENST00000471037 PTK6Q13882 451 aa9.01□□□□□ -0.97
SF3A1-206ENST00000471037 ACOX1Q15067 660 aa9.01□□□□□ -0.97
SF3A1-206ENST00000471037 PPP1R7Q15435 360 aa9.01□□□□□ -0.97
SF3A1-206ENST00000471037 CNGA3Q16281 694 aa9.01□□□□□ -0.97
SF3A1-206ENST00000471037 P3H1Q32P28 736 aa9.01□□□□□ -0.97
SF3A1-206ENST00000471037 AMZ1Q400G9 498 aa9.01□□□□□ -0.97
SF3A1-206ENST00000471037 COLEC12Q5KU26 742 aa9.01□□□□□ -0.97
SF3A1-206ENST00000471037 BORAQ6PGQ7 559 aa9.01□□□□□ -0.97
SF3A1-206ENST00000471037 C4orf22Q6V702 233 aa9.01□□□□□ -0.97
SF3A1-206ENST00000471037 HEATR4Q86WZ0 1026 aa9.01□□□□□ -0.97
SF3A1-206ENST00000471037 TP53INP2Q8IXH6 220 aa9.01□□□□□ -0.97
SF3A1-206ENST00000471037 NAGSQ8N159 534 aa9.01□□□□□ -0.97
SF3A1-206ENST00000471037 CBARPQ8N350 705 aaPredicted RBP9.01□□□□□ -0.97
SF3A1-206ENST00000471037 FAM71DQ8N9W8 422 aa9.01□□□□□ -0.97
SF3A1-206ENST00000471037 AGBL5Q8NDL9 886 aa9.01□□□□□ -0.97
SF3A1-206ENST00000471037 RCBTB1Q8NDN9 531 aa9.01□□□□□ -0.97
SF3A1-206ENST00000471037 OR4D9Q8NGE8 314 aa9.01□□□□□ -0.97
SF3A1-206ENST00000471037 NSMCE1Q8WV22 266 aa9.01□□□□□ -0.97
SF3A1-206ENST00000471037 MAML1Q92585 1016 aa9.01□□□□□ -0.97
SF3A1-206ENST00000471037 PMEPA1Q969W9 287 aa9.01□□□□□ -0.97
SF3A1-206ENST00000471037 NUS1Q96E22 293 aa9.01□□□□□ -0.97
SF3A1-206ENST00000471037 DTD2Q96FN9 168 aa9.01□□□□□ -0.97
SF3A1-206ENST00000471037 CCDC74BQ96LY2 380 aa9.01□□□□□ -0.97
SF3A1-206ENST00000471037 NSMCE3Q96MG7 304 aa9.01□□□□□ -0.97
SF3A1-206ENST00000471037 ZNF599Q96NL3 588 aa9.01□□□□□ -0.97
SF3A1-206ENST00000471037 DPYSL5Q9BPU6 564 aa9.01□□□□□ -0.97
SF3A1-206ENST00000471037 LRRC1Q9BTT6 524 aa9.01□□□□□ -0.97
SF3A1-206ENST00000471037 DDA1Q9BW61 102 aa9.01□□□□□ -0.97
SF3A1-206ENST00000471037 SP110Q9HB58 689 aa9.01□□□□□ -0.97
SF3A1-206ENST00000471037 HAUS2Q9NVX0 235 aa9.01□□□□□ -0.97
SF3A1-206ENST00000471037 MOSPD1Q9UJG1 213 aa9.01□□□□□ -0.97
SF3A1-206ENST00000471037 ST14Q9Y5Y6 855 aa9.01□□□□□ -0.97
SF3A1-206ENST00000471037 SDK2Q58EX2 2172 aa9□□□□□ -0.97
SF3A1-206ENST00000471037 IGHV1OR21-1A0A087WYE8 117 aa9□□□□□ -0.97
SF3A1-206ENST00000471037 C5orf60A6NFR6 353 aa9□□□□□ -0.97
SF3A1-206ENST00000471037 PSMD11O00231 422 aa9□□□□□ -0.97
SF3A1-206ENST00000471037 NDC80O14777 642 aa9□□□□□ -0.97
SF3A1-206ENST00000471037 MATN3O15232 486 aa9□□□□□ -0.97
SF3A1-206ENST00000471037 HEXIM1O94992 359 aaKnown RBP9□□□□□ -0.97
SF3A1-206ENST00000471037 IFNB1P01574 187 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms