RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 LINGO1Q96FE5 620 aa17.97■□□□□ 0.47
SMC4-211ENST00000469858 NECTIN4Q96NY8 510 aa17.97■□□□□ 0.47
SMC4-211ENST00000469858 TMEM237Q96Q45 408 aa17.97■□□□□ 0.47
SMC4-211ENST00000469858 MYLK2Q9H1R3 596 aa17.97■□□□□ 0.47
SMC4-211ENST00000469858 TFB2MQ9H5Q4 396 aaKnown RBP17.97■□□□□ 0.47
SMC4-211ENST00000469858 FBRSL1Q9HCM7 1045 aaKnown RBP17.97■□□□□ 0.47
SMC4-211ENST00000469858 NCKIPSDQ9NZQ3 722 aa17.97■□□□□ 0.47
SMC4-211ENST00000469858 HEY2Q9UBP5 337 aa17.97■□□□□ 0.47
SMC4-211ENST00000469858 LRRK1Q38SD2 2015 aa17.97■□□□□ 0.47
SMC4-211ENST00000469858 ELFN1P0C7U0 828 aa17.96■□□□□ 0.47
SMC4-211ENST00000469858 ITGB7P26010 798 aa17.96■□□□□ 0.47
SMC4-211ENST00000469858 DNAJB13P59910 316 aa17.96■□□□□ 0.47
SMC4-211ENST00000469858 IL2P60568 153 aa17.96■□□□□ 0.47
SMC4-211ENST00000469858 ATP6V0D1P61421 351 aa17.96■□□□□ 0.47
SMC4-211ENST00000469858 ARL13AQ5H913 290 aaPredicted RBP17.96■□□□□ 0.47
SMC4-211ENST00000469858 CFAP157Q5JU67 520 aa17.96■□□□□ 0.47
SMC4-211ENST00000469858 NUDT18Q6ZVK8 323 aa17.96■□□□□ 0.47
SMC4-211ENST00000469858 GBP7Q8N8V2 638 aaPredicted RBP17.96■□□□□ 0.47
SMC4-211ENST00000469858 LKAAEAR1Q8TD35 194 aa17.96■□□□□ 0.47
SMC4-211ENST00000469858 EEF1AKMT1Q8WVE0 214 aa17.96■□□□□ 0.47
SMC4-211ENST00000469858 SCAMP4Q969E2 229 aa17.96■□□□□ 0.47
SMC4-211ENST00000469858 FAM129BQ96TA1 746 aa17.96■□□□□ 0.47
SMC4-211ENST00000469858 FAM83DQ9H4H8 585 aa17.96■□□□□ 0.47
SMC4-211ENST00000469858 ZDHHC3Q9NYG2 299 aa17.96■□□□□ 0.47
SMC4-211ENST00000469858 EPS15L1Q9UBC2 864 aa17.96■□□□□ 0.47
SMC4-211ENST00000469858 IKZF3Q9UKT9 509 aa17.96■□□□□ 0.47
SMC4-211ENST00000469858 ANKRD12Q6UB98 2062 aa17.96■□□□□ 0.47
SMC4-211ENST00000469858 EYSQ5T1H1 3165 aa17.96■□□□□ 0.46
SMC4-211ENST00000469858 PLK4O00444 970 aa17.95■□□□□ 0.46
SMC4-211ENST00000469858 SMIM24O75264 130 aa17.95■□□□□ 0.46
SMC4-211ENST00000469858 TRIM16O95361 564 aa17.95■□□□□ 0.46
SMC4-211ENST00000469858 TSPAN12O95859 305 aa17.95■□□□□ 0.46
SMC4-211ENST00000469858 CCDC15Q0P6D6 951 aa17.95■□□□□ 0.46
SMC4-211ENST00000469858 HTR4Q13639 388 aa17.95■□□□□ 0.46
SMC4-211ENST00000469858 HSF5Q4G112 596 aaPredicted RBP17.95■□□□□ 0.46
SMC4-211ENST00000469858 FBXL19Q6PCT2 694 aa17.95■□□□□ 0.46
SMC4-211ENST00000469858 PIWIL4Q7Z3Z4 852 aaKnown RBP17.95■□□□□ 0.46
SMC4-211ENST00000469858 MTDHQ86UE4 582 aaKnown RBP17.95■□□□□ 0.46
SMC4-211ENST00000469858 SLC22A9Q8IVM8 553 aa17.95■□□□□ 0.46
SMC4-211ENST00000469858 RHEBL1Q8TAI7 183 aa17.95■□□□□ 0.46
SMC4-211ENST00000469858 KIAA1191Q96A73 305 aa17.95■□□□□ 0.46
SMC4-211ENST00000469858 ULK4Q96C45 1275 aa17.95■□□□□ 0.46
SMC4-211ENST00000469858 COPS8Q99627 209 aa17.95■□□□□ 0.46
SMC4-211ENST00000469858 WRAP53Q9BUR4 548 aaKnown RBP17.95■□□□□ 0.46
SMC4-211ENST00000469858 SHCBP1LQ9BZQ2 653 aa17.95■□□□□ 0.46
SMC4-211ENST00000469858 WWP1Q9H0M0 922 aa17.95■□□□□ 0.46
SMC4-211ENST00000469858 DHRS7Q9Y394 339 aa17.95■□□□□ 0.46
SMC4-211ENST00000469858 ATG2BQ96BY7 2078 aa17.95■□□□□ 0.46
SMC4-211ENST00000469858 NPEPPSL1A6NEC2 478 aa17.95■□□□□ 0.46
SMC4-211ENST00000469858 H3BQ06 376 aaPredicted RBP17.95■□□□□ 0.46
SMC4-211ENST00000469858 UBXN8O00124 270 aa17.95■□□□□ 0.46
SMC4-211ENST00000469858 CDC7O00311 574 aa17.95■□□□□ 0.46
SMC4-211ENST00000469858 BTN3A1O00481 513 aa17.95■□□□□ 0.46
SMC4-211ENST00000469858 MPSTP25325 297 aa17.95■□□□□ 0.46
SMC4-211ENST00000469858 SERPINB3P29508 390 aa17.95■□□□□ 0.46
SMC4-211ENST00000469858 WASP42768 502 aa17.95■□□□□ 0.46
SMC4-211ENST00000469858 NSG1P42857 185 aa17.95■□□□□ 0.46
SMC4-211ENST00000469858 DCDC1P59894 354 aa17.95■□□□□ 0.46
SMC4-211ENST00000469858 ZBTB16Q05516 673 aa17.95■□□□□ 0.46
SMC4-211ENST00000469858 COL19A1Q14993 1142 aa17.95■□□□□ 0.46
SMC4-211ENST00000469858 TSNQ15631 228 aaKnown RBP17.95■□□□□ 0.46
SMC4-211ENST00000469858 LACTB2Q53H82 288 aaPredicted RBP17.95■□□□□ 0.46
SMC4-211ENST00000469858 MMAAQ8IVH4 418 aaKnown RBP17.95■□□□□ 0.46
SMC4-211ENST00000469858 STAG3L4Q8TBR4 150 aa17.95■□□□□ 0.46
SMC4-211ENST00000469858 CSGALNACT1Q8TDX6 532 aa17.95■□□□□ 0.46
SMC4-211ENST00000469858 PPP1R16AQ96I34 528 aa17.95■□□□□ 0.46
SMC4-211ENST00000469858 ATOH8Q96SQ7 321 aa17.95■□□□□ 0.46
SMC4-211ENST00000469858 EBF4Q9BQW3 602 aa17.95■□□□□ 0.46
SMC4-211ENST00000469858 SIKE1Q9BRV8 207 aa17.95■□□□□ 0.46
SMC4-211ENST00000469858 ILKAPQ9H0C8 392 aaPredicted RBP17.95■□□□□ 0.46
SMC4-211ENST00000469858 PRSS16Q9NQE7 514 aa17.95■□□□□ 0.46
SMC4-211ENST00000469858 TSR3Q9UJK0 312 aaKnown RBP17.95■□□□□ 0.46
SMC4-211ENST00000469858 RNF112Q9ULX5 631 aa17.95■□□□□ 0.46
SMC4-211ENST00000469858 SLC25A14O95258 325 aaPredicted RBP17.94■□□□□ 0.46
SMC4-211ENST00000469858 TPBGLP0DKB5 382 aa17.94■□□□□ 0.46
SMC4-211ENST00000469858 ACOX1Q15067 660 aa17.94■□□□□ 0.46
SMC4-211ENST00000469858 GALNTL6Q49A17 601 aa17.94■□□□□ 0.46
SMC4-211ENST00000469858 LIPIQ6XZB0 460 aa17.94■□□□□ 0.46
SMC4-211ENST00000469858 MACC1Q6ZN28 852 aa17.94■□□□□ 0.46
SMC4-211ENST00000469858 DSG4Q86SJ6 1040 aa17.94■□□□□ 0.46
SMC4-211ENST00000469858 CHPFQ8IZ52 775 aa17.94■□□□□ 0.46
SMC4-211ENST00000469858 CDH19Q9H159 772 aa17.94■□□□□ 0.46
SMC4-211ENST00000469858 DYRK4Q9NR20 520 aa17.94■□□□□ 0.46
SMC4-211ENST00000469858 SUN2Q9UH99 717 aa17.94■□□□□ 0.46
SMC4-211ENST00000469858 CD207Q9UJ71 328 aa17.94■□□□□ 0.46
SMC4-211ENST00000469858 ZFP69BQ9UJL9 534 aa17.94■□□□□ 0.46
SMC4-211ENST00000469858 TMPRSS11EQ9UL52 423 aa17.94■□□□□ 0.46
SMC4-211ENST00000469858 RAP2CQ9Y3L5 183 aa17.94■□□□□ 0.46
SMC4-211ENST00000469858 SPTBN5Q9NRC6 3674 aaKnown RBP17.94■□□□□ 0.46
SMC4-211ENST00000469858 SUPT3HB4E1H0 165 aa17.93■□□□□ 0.46
SMC4-211ENST00000469858 SPINT1O43278 529 aa17.93■□□□□ 0.46
SMC4-211ENST00000469858 NPHS1O60500 1241 aa17.93■□□□□ 0.46
SMC4-211ENST00000469858 KERAO60938 352 aa17.93■□□□□ 0.46
SMC4-211ENST00000469858 SUPT3HO75486 399 aa17.93■□□□□ 0.46
SMC4-211ENST00000469858 PSMD8P48556 350 aa17.93■□□□□ 0.46
SMC4-211ENST00000469858 GALK1P51570 392 aa17.93■□□□□ 0.46
SMC4-211ENST00000469858 B4GALNT1Q00973 533 aa17.93■□□□□ 0.46
SMC4-211ENST00000469858 AAK1Q2M2I8 961 aa17.93■□□□□ 0.46
SMC4-211ENST00000469858 GPRC6AQ5T6X5 926 aa17.93■□□□□ 0.46
SMC4-211ENST00000469858 RPS27LQ71UM5 84 aaKnown RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms