RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 ZNF678Q5SXM1 525 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 PGM2L1Q6PCE3 622 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 LYSMD3Q7Z3D4 306 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 LRRC49Q8IUZ0 686 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 MRPL1Q9BYD6 325 aaKnown RBP9.36□□□□□ -0.91
TOP3A-203ENST00000469739 PDFQ9HBH1 243 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 TIMMDC1Q9NPL8 285 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 SQORQ9Y6N5 450 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 SPEGQ15772 3267 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 PLXNA3P51805 1871 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 FAM92AA1XBS5 289 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 C2orf81A6NN90 581 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 ANKRD66B4E2M5 251 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 F8W8V4 182 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 BOLA2-SMG1P6H3BVE0 249 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 PGM3O95394 542 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 MT-ND1P03886 318 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 ALDOCP09972 364 aaKnown RBP9.36□□□□□ -0.91
TOP3A-203ENST00000469739 MYL4P12829 197 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 PSMC3P17980 439 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 GABRR2P28476 465 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 GDF5P43026 501 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 TUFMP49411 452 aaKnown RBP9.36□□□□□ -0.91
TOP3A-203ENST00000469739 CSRP3P50461 194 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 KPNA2P52292 529 aaKnown RBP9.36□□□□□ -0.91
TOP3A-203ENST00000469739 ADGRF1Q5T601 910 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 CYHR1Q6ZMK1 362 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 RBM44Q6ZP01 1051 aaKnown RBP9.36□□□□□ -0.91
TOP3A-203ENST00000469739 KIAA0408Q6ZU52 694 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 AMIGO2Q86SJ2 522 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 CDYL2Q8N8U2 506 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 ZNF461Q8TAF7 563 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 SKA2Q8WVK7 121 aaPredicted RBP9.36□□□□□ -0.91
TOP3A-203ENST00000469739 GAB3Q8WWW8 586 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 KLHL32Q96NJ5 620 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 PSKH2Q96QS6 385 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 PFDN4Q9NQP4 134 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 IL37Q9NZH6 218 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 CD274Q9NZQ7 290 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 ZMYM5Q9UJ78 669 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 TDRKHQ9Y2W6 561 aaKnown RBP9.36□□□□□ -0.91
TOP3A-203ENST00000469739 CHD9Q3L8U1 2897 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 TRIOO75962 3097 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 ZBBXA8MT70 800 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 VILLO15195 856 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 CCNT2O60583 730 aaKnown RBP9.36□□□□□ -0.91
TOP3A-203ENST00000469739 H2AFYO75367 372 aaKnown RBP9.36□□□□□ -0.91
TOP3A-203ENST00000469739 ECI2O75521 394 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 BAIAP3O94812 1187 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 CRTAMO95727 393 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 MTHFD2P13995 350 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 HGFP14210 728 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 HTR7P34969 479 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 PSME3P61289 254 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 FAM45BPQ6NSW5 357 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 FBXO39Q8N4B4 442 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 RP9Q8TA86 221 aaKnown RBP9.36□□□□□ -0.91
TOP3A-203ENST00000469739 FAM45AQ8TCE6 357 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 PPWD1Q96BP3 646 aaKnown RBP9.36□□□□□ -0.91
TOP3A-203ENST00000469739 C19orf60Q96EN9 201 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 LINGO1Q96FE5 620 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 FEM1CQ96JP0 617 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 CNDP1Q96KN2 507 aa9.36□□□□□ -0.91
TOP3A-203ENST00000469739 TDRD1Q9BXT4 1180 aaKnown RBP9.36□□□□□ -0.91
TOP3A-203ENST00000469739 EML4Q9HC35 981 aaKnown RBP9.36□□□□□ -0.91
TOP3A-203ENST00000469739 EIF2B4Q9UI10 523 aaKnown RBP9.36□□□□□ -0.91
TOP3A-203ENST00000469739 A0A1W2PRU2 124 aa9.35□□□□□ -0.91
TOP3A-203ENST00000469739 TMEM247A6NEH6 219 aa9.35□□□□□ -0.91
TOP3A-203ENST00000469739 TRPC5OSA6NMA1 111 aa9.35□□□□□ -0.91
TOP3A-203ENST00000469739 FBP2O00757 339 aa9.35□□□□□ -0.91
TOP3A-203ENST00000469739 TRIM24O15164 1050 aa9.35□□□□□ -0.91
TOP3A-203ENST00000469739 TBC1D4O60343 1298 aa9.35□□□□□ -0.91
TOP3A-203ENST00000469739 IMPDH1P20839 514 aa9.35□□□□□ -0.91
TOP3A-203ENST00000469739 HOXD12P35452 270 aa9.35□□□□□ -0.91
TOP3A-203ENST00000469739 MAPKAPK2P49137 400 aa9.35□□□□□ -0.91
TOP3A-203ENST00000469739 PSMD7P51665 324 aa9.35□□□□□ -0.91
TOP3A-203ENST00000469739 SLC7A2P52569 658 aa9.35□□□□□ -0.91
TOP3A-203ENST00000469739 EMP3P54852 163 aa9.35□□□□□ -0.91
TOP3A-203ENST00000469739 CDH4P55283 916 aa9.35□□□□□ -0.91
TOP3A-203ENST00000469739 FRG1Q14331 258 aaKnown RBP9.35□□□□□ -0.91
TOP3A-203ENST00000469739 GRM2Q14416 872 aa9.35□□□□□ -0.91
TOP3A-203ENST00000469739 GRAMD4Q6IC98 578 aa9.35□□□□□ -0.91
TOP3A-203ENST00000469739 CXorf57Q6NSI4 855 aaKnown RBP9.35□□□□□ -0.91
TOP3A-203ENST00000469739 RFLNAQ6ZTI6 216 aa9.35□□□□□ -0.91
TOP3A-203ENST00000469739 SLC15A3Q8IY34 581 aa9.35□□□□□ -0.91
TOP3A-203ENST00000469739 ICA1LQ8NDH6 482 aa9.35□□□□□ -0.91
TOP3A-203ENST00000469739 GABPB2Q8TAK5 448 aaPredicted RBP9.35□□□□□ -0.91
TOP3A-203ENST00000469739 PXYLP1Q8TE99 480 aa9.35□□□□□ -0.91
TOP3A-203ENST00000469739 TWIST2Q8WVJ9 160 aa9.35□□□□□ -0.91
TOP3A-203ENST00000469739 EID2BQ96D98 161 aa9.35□□□□□ -0.91
TOP3A-203ENST00000469739 ABHD8Q96I13 439 aa9.35□□□□□ -0.91
TOP3A-203ENST00000469739 MAGEH1Q9H213 219 aa9.35□□□□□ -0.91
TOP3A-203ENST00000469739 MRM3Q9HC36 420 aaKnown RBP9.35□□□□□ -0.91
TOP3A-203ENST00000469739 TAS2R13Q9NYV9 303 aa9.35□□□□□ -0.91
TOP3A-203ENST00000469739 VTI1BQ9UEU0 232 aa9.35□□□□□ -0.91
TOP3A-203ENST00000469739 VPS51Q9UID3 782 aa9.35□□□□□ -0.91
TOP3A-203ENST00000469739 AURKCQ9UQB9 309 aa9.35□□□□□ -0.91
TOP3A-203ENST00000469739 MED16Q9Y2X0 877 aa9.35□□□□□ -0.91
TOP3A-203ENST00000469739 PIKFYVEQ9Y2I7 2098 aa9.35□□□□□ -0.91
TOP3A-203ENST00000469739 FAM149AA5PLN7 773 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms