RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 EPGNQ6UW88 154 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 TMEM207Q6UWW9 146 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 VITQ6UXI7 678 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 FRA10AC1Q70Z53 315 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 MTSS1LQ765P7 747 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 TSPAN33Q86UF1 283 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 ALYREFQ86V81 257 aaKnown RBP9.26□□□□□ -0.93
SMC1A-205ENST00000469129 HOMEZQ8IX15 550 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 MYO1HQ8N1T3 1032 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 ARHGAP24Q8N264 748 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 FBXO39Q8N4B4 442 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 MYLIPQ8WY64 445 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 EXT2Q93063 718 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 ELSPBP1Q96BH3 223 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 PTERQ96BW5 349 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 EID2BQ96D98 161 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 LINGO1Q96FE5 620 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 PDLIM5Q96HC4 596 aaKnown RBP9.26□□□□□ -0.93
SMC1A-205ENST00000469129 LRRC3BQ96PB8 259 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 ATOH8Q96SQ7 321 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 COPS8Q99627 209 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 CCDC28BQ9BUN5 200 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 UNKQ9C0B0 810 aaKnown RBP9.26□□□□□ -0.93
SMC1A-205ENST00000469129 RASSF4Q9H2L5 321 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 ZNF395Q9H8N7 513 aaPredicted RBP9.26□□□□□ -0.93
SMC1A-205ENST00000469129 CYP4F12Q9HCS2 524 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 IL26Q9NPH9 171 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 TCF7L2Q9NQB0 619 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 SMOXQ9NWM0 555 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 NUDT4Q9NZJ9 180 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 LMCD1Q9NZU5 365 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 KLHL42Q9P2K6 505 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 CDYLQ9Y232 598 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 STK38LQ9Y2H1 464 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 MED16Q9Y2X0 877 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 DHRS7Q9Y394 339 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 ANKRD12Q6UB98 2062 aa9.26□□□□□ -0.93
SMC1A-205ENST00000469129 NPEPPSL1A6NEC2 478 aa9.25□□□□□ -0.93
SMC1A-205ENST00000469129 C1QTNF3-AMACRE9PGA6 284 aa9.25□□□□□ -0.93
SMC1A-205ENST00000469129 H0Y858 1186 aa9.25□□□□□ -0.93
SMC1A-205ENST00000469129 BTN3A1O00481 513 aa9.25□□□□□ -0.93
SMC1A-205ENST00000469129 OR1I1O60431 355 aa9.25□□□□□ -0.93
SMC1A-205ENST00000469129 SNX2O60749 519 aa9.25□□□□□ -0.93
SMC1A-205ENST00000469129 CHRNGP07510 517 aa9.25□□□□□ -0.93
SMC1A-205ENST00000469129 OR56A5P0C7T3 313 aa9.25□□□□□ -0.93
SMC1A-205ENST00000469129 ESRRAP11474 423 aaPredicted RBP9.25□□□□□ -0.93
SMC1A-205ENST00000469129 ENO3P13929 434 aaPredicted RBP9.25□□□□□ -0.93
SMC1A-205ENST00000469129 FOSL2P15408 326 aa9.25□□□□□ -0.93
SMC1A-205ENST00000469129 NQO1P15559 274 aaKnown RBP9.25□□□□□ -0.93
SMC1A-205ENST00000469129 PSMC3P17980 439 aa9.25□□□□□ -0.93
SMC1A-205ENST00000469129 SP100P23497 879 aaPredicted RBP9.25□□□□□ -0.93
SMC1A-205ENST00000469129 ITGB7P26010 798 aa9.25□□□□□ -0.93
SMC1A-205ENST00000469129 PTPN4P29074 926 aa9.25□□□□□ -0.93
SMC1A-205ENST00000469129 MMP12P39900 470 aa9.25□□□□□ -0.93
SMC1A-205ENST00000469129 IDH3AP50213 366 aa9.25□□□□□ -0.93
SMC1A-205ENST00000469129 CLCN7P51798 805 aa9.25□□□□□ -0.93
SMC1A-205ENST00000469129 MNAT1P51948 309 aa9.25□□□□□ -0.93
SMC1A-205ENST00000469129 ALDH18A1P54886 795 aaKnown RBP9.25□□□□□ -0.93
SMC1A-205ENST00000469129 RUNX3Q13761 415 aa9.25□□□□□ -0.93
SMC1A-205ENST00000469129 ELAVL3Q14576 367 aaKnown RBP9.25□□□□□ -0.93
SMC1A-205ENST00000469129 ZRSR2Q15696 482 aaKnown RBP9.25□□□□□ -0.93
SMC1A-205ENST00000469129 CHRNA6Q15825 494 aa9.25□□□□□ -0.93
SMC1A-205ENST00000469129 CTC1Q2NKJ3 1217 aa9.25□□□□□ -0.93
SMC1A-205ENST00000469129 ZNF284Q2VY69 593 aa9.25□□□□□ -0.93
SMC1A-205ENST00000469129 HNRNPA1L2Q32P51 320 aaKnown RBP9.25□□□□□ -0.93
SMC1A-205ENST00000469129 ARSIQ5FYB1 569 aa9.25□□□□□ -0.93
SMC1A-205ENST00000469129 SH2D4BQ5SQS7 431 aa9.25□□□□□ -0.93
SMC1A-205ENST00000469129 ZNF678Q5SXM1 525 aa9.25□□□□□ -0.93
SMC1A-205ENST00000469129 MACC1Q6ZN28 852 aa9.25□□□□□ -0.93
SMC1A-205ENST00000469129 ASRGL1Q7L266 308 aa9.25□□□□□ -0.93
SMC1A-205ENST00000469129 EFL1Q7Z2Z2 1120 aaKnown RBP9.25□□□□□ -0.93
SMC1A-205ENST00000469129 CUZD1Q86UP6 607 aa9.25□□□□□ -0.93
SMC1A-205ENST00000469129 C12orf40Q86WS4 652 aa9.25□□□□□ -0.93
SMC1A-205ENST00000469129 NRSN1Q8IZ57 195 aa9.25□□□□□ -0.93
SMC1A-205ENST00000469129 ZBTB2Q8N680 514 aa9.25□□□□□ -0.93
SMC1A-205ENST00000469129 PTGR2Q8N8N7 351 aaPredicted RBP9.25□□□□□ -0.93
SMC1A-205ENST00000469129 SIDT2Q8NBJ9 832 aaKnown RBP9.25□□□□□ -0.93
SMC1A-205ENST00000469129 GPR26Q8NDV2 337 aa9.25□□□□□ -0.93
SMC1A-205ENST00000469129 TMIEQ8NEW7 156 aa9.25□□□□□ -0.93
SMC1A-205ENST00000469129 VOPP1Q96AW1 172 aa9.25□□□□□ -0.93
SMC1A-205ENST00000469129 NSL1Q96IY1 281 aa9.25□□□□□ -0.93
SMC1A-205ENST00000469129 EBF4Q9BQW3 602 aa9.25□□□□□ -0.93
SMC1A-205ENST00000469129 ZSCAN5AQ9BUG6 496 aa9.25□□□□□ -0.93
SMC1A-205ENST00000469129 FAM126AQ9BYI3 521 aaPredicted RBP9.25□□□□□ -0.93
SMC1A-205ENST00000469129 NMUR2Q9GZQ4 415 aa9.25□□□□□ -0.93
SMC1A-205ENST00000469129 COG4Q9H9E3 785 aa9.25□□□□□ -0.93
SMC1A-205ENST00000469129 SARS2Q9NP81 518 aaKnown RBP9.25□□□□□ -0.93
SMC1A-205ENST00000469129 HPS4Q9NQG7 708 aa9.25□□□□□ -0.93
SMC1A-205ENST00000469129 DYRK4Q9NR20 520 aa9.25□□□□□ -0.93
SMC1A-205ENST00000469129 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.25□□□□□ -0.93
SMC1A-205ENST00000469129 KCTD5Q9NXV2 234 aa9.25□□□□□ -0.93
SMC1A-205ENST00000469129 TAGLN3Q9UI15 199 aa9.25□□□□□ -0.93
SMC1A-205ENST00000469129 ZFC3H1O60293 1989 aaKnown RBP9.24□□□□□ -0.93
SMC1A-205ENST00000469129 COL6A3P12111 3177 aa9.24□□□□□ -0.93
SMC1A-205ENST00000469129 IGLV3-16A0A075B6K0 115 aa9.24□□□□□ -0.93
SMC1A-205ENST00000469129 PABPN1LA6NDY0 278 aaKnown RBP9.24□□□□□ -0.93
SMC1A-205ENST00000469129 NEMP2A6NFY4 417 aa9.24□□□□□ -0.93
SMC1A-205ENST00000469129 C16orf96A6NNT2 1141 aa9.24□□□□□ -0.93
SMC1A-205ENST00000469129 SPECC1L-ADORA2AF8WAN1 911 aa9.24□□□□□ -0.93
SMC1A-205ENST00000469129 UBXN8O00124 270 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms