RNA–Protein interactions for RNA: ENST00000469003.5

CCDC28B-204, Transcript of coiled-coil domain containing 28B, humanhuman

TSL 2

Gene CCDC28B, Length 1,235 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-204ENST00000469003 A0A0A6YYK5 440 aaPredicted RBP16.37■□□□□ 0.21
CCDC28B-204ENST00000469003 B8ZZF3 427 aa16.37■□□□□ 0.21
CCDC28B-204ENST00000469003 AKR1B15C9JRZ8 316 aaPredicted RBP16.37■□□□□ 0.21
CCDC28B-204ENST00000469003 CHUKO15111 745 aa16.37■□□□□ 0.21
CCDC28B-204ENST00000469003 MT-CYBP00156 380 aaPredicted RBP16.37■□□□□ 0.21
CCDC28B-204ENST00000469003 SLC4A1P02730 911 aa16.37■□□□□ 0.21
CCDC28B-204ENST00000469003 WT1P19544 449 aaPredicted RBP16.37■□□□□ 0.21
CCDC28B-204ENST00000469003 PTPN3P26045 913 aa16.37■□□□□ 0.21
CCDC28B-204ENST00000469003 CDKN2BP42772 138 aa16.37■□□□□ 0.21
CCDC28B-204ENST00000469003 ATP1A2P50993 1020 aa16.37■□□□□ 0.21
CCDC28B-204ENST00000469003 EPHA4P54764 986 aa16.37■□□□□ 0.21
CCDC28B-204ENST00000469003 NFATC2Q13469 925 aa16.37■□□□□ 0.21
CCDC28B-204ENST00000469003 PRKD1Q15139 912 aaPredicted RBP16.37■□□□□ 0.21
CCDC28B-204ENST00000469003 LINC00303Q3SY05 128 aa16.37■□□□□ 0.21
CCDC28B-204ENST00000469003 ZNF648Q5T619 568 aaPredicted RBP16.37■□□□□ 0.21
CCDC28B-204ENST00000469003 CCDC70Q6NSX1 233 aa16.37■□□□□ 0.21
CCDC28B-204ENST00000469003 ADGRG6Q86SQ4 1221 aa16.37■□□□□ 0.21
CCDC28B-204ENST00000469003 TEKT5Q96M29 485 aa16.37■□□□□ 0.21
CCDC28B-204ENST00000469003 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.37■□□□□ 0.21
CCDC28B-204ENST00000469003 ASPSCR1Q9BZE9 553 aa16.37■□□□□ 0.21
CCDC28B-204ENST00000469003 OCIAD1Q9NX40 245 aa16.37■□□□□ 0.21
CCDC28B-204ENST00000469003 CPNE7Q9UBL6 633 aa16.37■□□□□ 0.21
CCDC28B-204ENST00000469003 B3GALT1Q9Y5Z6 326 aa16.37■□□□□ 0.21
CCDC28B-204ENST00000469003 PIEZO2Q9H5I5 2752 aa16.36■□□□□ 0.21
CCDC28B-204ENST00000469003 EFCAB7A8K855 629 aa16.36■□□□□ 0.21
CCDC28B-204ENST00000469003 ARHGAP6O43182 974 aa16.36■□□□□ 0.21
CCDC28B-204ENST00000469003 PSTPIP1O43586 416 aa16.36■□□□□ 0.21
CCDC28B-204ENST00000469003 BPIP17213 487 aa16.36■□□□□ 0.21
CCDC28B-204ENST00000469003 NOP2P46087 812 aaKnown RBP16.36■□□□□ 0.21
CCDC28B-204ENST00000469003 HADHBP55084 474 aaKnown RBP16.36■□□□□ 0.21
CCDC28B-204ENST00000469003 RAB15P59190 212 aa16.36■□□□□ 0.21
CCDC28B-204ENST00000469003 KCNC4Q03721 635 aa16.36■□□□□ 0.21
CCDC28B-204ENST00000469003 TBX2Q13207 712 aaPredicted RBP16.36■□□□□ 0.21
CCDC28B-204ENST00000469003 SNAP47Q5SQN1 464 aa16.36■□□□□ 0.21
CCDC28B-204ENST00000469003 DCAF12Q5T6F0 453 aa16.36■□□□□ 0.21
CCDC28B-204ENST00000469003 ARHGAP22Q7Z5H3 698 aa16.36■□□□□ 0.21
CCDC28B-204ENST00000469003 FAM129CQ86XR2 697 aa16.36■□□□□ 0.21
CCDC28B-204ENST00000469003 BMPERQ8N8U9 685 aa16.36■□□□□ 0.21
CCDC28B-204ENST00000469003 EXD3Q8N9H8 876 aa16.36■□□□□ 0.21
CCDC28B-204ENST00000469003 RNF214Q8ND24 703 aa16.36■□□□□ 0.21
CCDC28B-204ENST00000469003 TFB1MQ8WVM0 346 aaKnown RBP16.36■□□□□ 0.21
CCDC28B-204ENST00000469003 JPH3Q8WXH2 748 aaPredicted RBP16.36■□□□□ 0.21
CCDC28B-204ENST00000469003 NKD1Q969G9 470 aa16.36■□□□□ 0.21
CCDC28B-204ENST00000469003 EPB41L1Q9H4G0 881 aa16.36■□□□□ 0.21
CCDC28B-204ENST00000469003 PRDM8Q9NQV8 689 aa16.36■□□□□ 0.21
CCDC28B-204ENST00000469003 KLC4Q9NSK0 619 aa16.36■□□□□ 0.21
CCDC28B-204ENST00000469003 PTPN13Q12923 2485 aa16.35■□□□□ 0.21
CCDC28B-204ENST00000469003 LILRA5A6NI73 299 aa16.35■□□□□ 0.21
CCDC28B-204ENST00000469003 PYCARD-AS1I3L0S3 204 aa16.35■□□□□ 0.21
CCDC28B-204ENST00000469003 KMOO15229 486 aa16.35■□□□□ 0.21
CCDC28B-204ENST00000469003 CST8O60676 142 aa16.35■□□□□ 0.21
CCDC28B-204ENST00000469003 PMPCBO75439 489 aa16.35■□□□□ 0.21
CCDC28B-204ENST00000469003 PECAM1P16284 738 aaPredicted RBP16.35■□□□□ 0.21
CCDC28B-204ENST00000469003 CD68P34810 354 aaPredicted RBP16.35■□□□□ 0.21
CCDC28B-204ENST00000469003 UGT1A3P35503 534 aa16.35■□□□□ 0.21
CCDC28B-204ENST00000469003 UBE2IP63279 158 aaKnown RBP16.35■□□□□ 0.21
CCDC28B-204ENST00000469003 CRTC3Q6UUV7 619 aa16.35■□□□□ 0.21
CCDC28B-204ENST00000469003 SPOCD1Q6ZMY3 1216 aa16.35■□□□□ 0.21
CCDC28B-204ENST00000469003 LRRTM4Q86VH4 590 aa16.35■□□□□ 0.21
CCDC28B-204ENST00000469003 NCSTNQ92542 709 aa16.35■□□□□ 0.21
CCDC28B-204ENST00000469003 EXTL1Q92935 676 aa16.35■□□□□ 0.21
CCDC28B-204ENST00000469003 PLEKHG4BQ96PX9 1271 aa16.35■□□□□ 0.21
CCDC28B-204ENST00000469003 TEFMQ96QE5 360 aaKnown RBP16.35■□□□□ 0.21
CCDC28B-204ENST00000469003 ARHGAP9Q9BRR9 750 aa16.35■□□□□ 0.21
CCDC28B-204ENST00000469003 OSGEPL1Q9H4B0 414 aa16.35■□□□□ 0.21
CCDC28B-204ENST00000469003 UCK1Q9HA47 277 aa16.35■□□□□ 0.21
CCDC28B-204ENST00000469003 UBP1Q9NZI7 540 aa16.35■□□□□ 0.21
CCDC28B-204ENST00000469003 SAE1Q9UBE0 346 aaPredicted RBP16.35■□□□□ 0.21
CCDC28B-204ENST00000469003 FAM153AQ9UHL3 310 aa16.35■□□□□ 0.21
CCDC28B-204ENST00000469003 SPO11Q9Y5K1 396 aa16.35■□□□□ 0.21
CCDC28B-204ENST00000469003 A8MU76 341 aa16.34■□□□□ 0.21
CCDC28B-204ENST00000469003 AURKAO14965 403 aa16.34■□□□□ 0.21
CCDC28B-204ENST00000469003 MTSS1O43312 755 aa16.34■□□□□ 0.21
CCDC28B-204ENST00000469003 VEGFDO43915 354 aa16.34■□□□□ 0.21
CCDC28B-204ENST00000469003 ZNF7P17097 686 aaPredicted RBP16.34■□□□□ 0.21
CCDC28B-204ENST00000469003 XRCC1P18887 633 aaPredicted RBP16.34■□□□□ 0.21
CCDC28B-204ENST00000469003 MAGEA1P43355 309 aa16.34■□□□□ 0.21
CCDC28B-204ENST00000469003 MAPK9P45984 424 aa16.34■□□□□ 0.21
CCDC28B-204ENST00000469003 MC2RQ01718 297 aa16.34■□□□□ 0.21
CCDC28B-204ENST00000469003 WASHC5Q12768 1159 aa16.34■□□□□ 0.21
CCDC28B-204ENST00000469003 INSCQ1MX18 579 aa16.34■□□□□ 0.21
CCDC28B-204ENST00000469003 KAZNQ674X7 775 aa16.34■□□□□ 0.21
CCDC28B-204ENST00000469003 ANKS6Q68DC2 871 aa16.34■□□□□ 0.21
CCDC28B-204ENST00000469003 KDELC1Q6UW63 502 aa16.34■□□□□ 0.21
CCDC28B-204ENST00000469003 IL22RA1Q8N6P7 574 aa16.34■□□□□ 0.21
CCDC28B-204ENST00000469003 HTR3CQ8WXA8 447 aa16.34■□□□□ 0.21
CCDC28B-204ENST00000469003 VPS35Q96QK1 796 aa16.34■□□□□ 0.21
CCDC28B-204ENST00000469003 TIMM29Q9BSF4 260 aa16.34■□□□□ 0.21
CCDC28B-204ENST00000469003 TBC1D10AQ9BXI6 508 aa16.34■□□□□ 0.21
CCDC28B-204ENST00000469003 TRABDQ9H4I3 376 aa16.34■□□□□ 0.21
CCDC28B-204ENST00000469003 SLC23A2Q9UGH3 650 aa16.34■□□□□ 0.21
CCDC28B-204ENST00000469003 ALG6Q9Y672 507 aa16.34■□□□□ 0.21
CCDC28B-204ENST00000469003 LOC285095A0A1B0GVY8 99 aa16.33■□□□□ 0.2
CCDC28B-204ENST00000469003 PRR19A6NJB7 356 aa16.33■□□□□ 0.2
CCDC28B-204ENST00000469003 RAD1O60671 282 aa16.33■□□□□ 0.2
CCDC28B-204ENST00000469003 CDK14O94921 469 aa16.33■□□□□ 0.2
CCDC28B-204ENST00000469003 EPOP01588 193 aa16.33■□□□□ 0.2
CCDC28B-204ENST00000469003 NFKB1P19838 968 aa16.33■□□□□ 0.2
CCDC28B-204ENST00000469003 HMGCLP35914 325 aa16.33■□□□□ 0.2
CCDC28B-204ENST00000469003 WNT3AP56704 352 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms