RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 TMTC2Q8N394 836 aa5.04□□□□□ -1.6
LSM5-209ENST00000468872 RASGEF1CQ8N431 466 aa5.04□□□□□ -1.6
LSM5-209ENST00000468872 POGLUT1Q8NBL1 392 aa5.04□□□□□ -1.6
LSM5-209ENST00000468872 OR14A16Q8NHC5 309 aa5.04□□□□□ -1.6
LSM5-209ENST00000468872 HMGCLL1Q8TB92 370 aa5.04□□□□□ -1.6
LSM5-209ENST00000468872 DUSP19Q8WTR2 217 aa5.04□□□□□ -1.6
LSM5-209ENST00000468872 PTPMT1Q8WUK0 201 aaPredicted RBP5.04□□□□□ -1.6
LSM5-209ENST00000468872 ZNF622Q969S3 477 aaKnown RBP eCLIP5.04□□□□□ -1.6
LSM5-209ENST00000468872 RADILQ96JH8 1075 aa5.04□□□□□ -1.6
LSM5-209ENST00000468872 SLC25A33Q9BSK2 321 aa5.04□□□□□ -1.6
LSM5-209ENST00000468872 AP1M1Q9BXS5 423 aa5.04□□□□□ -1.6
LSM5-209ENST00000468872 SLCO5A1Q9H2Y9 848 aa5.04□□□□□ -1.6
LSM5-209ENST00000468872 DNAJC18Q9H819 358 aa5.04□□□□□ -1.6
LSM5-209ENST00000468872 SLC35C2Q9NQQ7 365 aa5.04□□□□□ -1.6
LSM5-209ENST00000468872 PSD3Q9NYI0 1048 aa5.04□□□□□ -1.6
LSM5-209ENST00000468872 TAB2Q9NYJ8 693 aa5.04□□□□□ -1.6
LSM5-209ENST00000468872 CFDP1Q9UEE9 299 aaPredicted RBP5.04□□□□□ -1.6
LSM5-209ENST00000468872 PADI3Q9ULW8 664 aa5.04□□□□□ -1.6
LSM5-209ENST00000468872 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.04□□□□□ -1.6
LSM5-209ENST00000468872 ATXN2Q99700 1313 aaKnown RBP5.03□□□□□ -1.6
LSM5-209ENST00000468872 LOC100509620A0A075B734 347 aa5.03□□□□□ -1.6
LSM5-209ENST00000468872 TMEM8BA6NDV4 472 aa5.03□□□□□ -1.6
LSM5-209ENST00000468872 EIF4E1BA6NMX2 242 aaKnown RBP5.03□□□□□ -1.6
LSM5-209ENST00000468872 RSL1D1O76021 490 aaKnown RBP5.03□□□□□ -1.6
LSM5-209ENST00000468872 SSTR2P30874 369 aa5.03□□□□□ -1.6
LSM5-209ENST00000468872 FASLGP48023 281 aa5.03□□□□□ -1.6
LSM5-209ENST00000468872 LIG4P49917 911 aa5.03□□□□□ -1.6
LSM5-209ENST00000468872 TAS2R38P59533 333 aa5.03□□□□□ -1.6
LSM5-209ENST00000468872 BNC1Q01954 994 aa5.03□□□□□ -1.6
LSM5-209ENST00000468872 FOXM1Q08050 763 aa5.03□□□□□ -1.6
LSM5-209ENST00000468872 TRAF3Q13114 568 aa5.03□□□□□ -1.6
LSM5-209ENST00000468872 MAD2L1Q13257 205 aaPredicted RBP5.03□□□□□ -1.6
LSM5-209ENST00000468872 PRPF4BQ13523 1007 aaKnown RBP5.03□□□□□ -1.6
LSM5-209ENST00000468872 CTF1Q16619 201 aa5.03□□□□□ -1.6
LSM5-209ENST00000468872 DECR1Q16698 335 aa5.03□□□□□ -1.6
LSM5-209ENST00000468872 KYNUQ16719 465 aa5.03□□□□□ -1.6
LSM5-209ENST00000468872 CCDC96Q2M329 555 aa5.03□□□□□ -1.6
LSM5-209ENST00000468872 MYLK3Q32MK0 819 aa5.03□□□□□ -1.6
LSM5-209ENST00000468872 TDRD12Q587J7 1177 aaKnown RBP5.03□□□□□ -1.6
LSM5-209ENST00000468872 ERMARDQ5T6L9 678 aa5.03□□□□□ -1.6
LSM5-209ENST00000468872 WDR73Q6P4I2 378 aa5.03□□□□□ -1.6
LSM5-209ENST00000468872 PLPPR4Q7Z2D5 763 aa5.03□□□□□ -1.6
LSM5-209ENST00000468872 FBXL14Q8N1E6 418 aa5.03□□□□□ -1.6
LSM5-209ENST00000468872 POMGNT2Q8NAT1 580 aa5.03□□□□□ -1.6
LSM5-209ENST00000468872 SPATA3Q8NHX4 192 aa5.03□□□□□ -1.6
LSM5-209ENST00000468872 WFIKKN2Q8TEU8 576 aa5.03□□□□□ -1.6
LSM5-209ENST00000468872 TAAR8Q969N4 342 aa5.03□□□□□ -1.6
LSM5-209ENST00000468872 MIB2Q96AX9 1013 aa5.03□□□□□ -1.6
LSM5-209ENST00000468872 DGAT2Q96PD7 388 aa5.03□□□□□ -1.6
LSM5-209ENST00000468872 BAG1Q99933 345 aaPredicted RBP5.03□□□□□ -1.6
LSM5-209ENST00000468872 SIL1Q9H173 461 aa5.03□□□□□ -1.6
LSM5-209ENST00000468872 PCDHA7Q9UN72 937 aa5.03□□□□□ -1.6
LSM5-209ENST00000468872 PPIEQ9UNP9 301 aaKnown RBP5.03□□□□□ -1.6
LSM5-209ENST00000468872 TRPV2Q9Y5S1 764 aa5.03□□□□□ -1.6
LSM5-209ENST00000468872 GPR75-ASB3A0A0A6YYF3 556 aa5.02□□□□□ -1.61
LSM5-209ENST00000468872 A0A0U1RQJ8 604 aa5.02□□□□□ -1.61
LSM5-209ENST00000468872 LINC01553A4QN01 128 aa5.02□□□□□ -1.61
LSM5-209ENST00000468872 PRSS44E7EML9 344 aa5.02□□□□□ -1.61
LSM5-209ENST00000468872 SERPINI2O75830 405 aa5.02□□□□□ -1.61
LSM5-209ENST00000468872 TGFB3P10600 412 aa5.02□□□□□ -1.61
LSM5-209ENST00000468872 PLA2G2AP14555 144 aa5.02□□□□□ -1.61
LSM5-209ENST00000468872 ITGB8P26012 769 aa5.02□□□□□ -1.61
LSM5-209ENST00000468872 HOXA11P31270 313 aaPredicted RBP5.02□□□□□ -1.61
LSM5-209ENST00000468872 SEC61BP60468 96 aaKnown RBP5.02□□□□□ -1.61
LSM5-209ENST00000468872 PPP2R2BQ00005 443 aa5.02□□□□□ -1.61
LSM5-209ENST00000468872 DHX34Q14147 1143 aaKnown RBP5.02□□□□□ -1.61
LSM5-209ENST00000468872 FAM133BQ5BKY9 247 aaKnown RBP5.02□□□□□ -1.61
LSM5-209ENST00000468872 C8orf82Q6P1X6 216 aaPredicted RBP5.02□□□□□ -1.61
LSM5-209ENST00000468872 PAPD4Q6PIY7 484 aaKnown RBP5.02□□□□□ -1.61
LSM5-209ENST00000468872 ATG9AQ7Z3C6 839 aa5.02□□□□□ -1.61
LSM5-209ENST00000468872 GUF1Q8N442 669 aaKnown RBP5.02□□□□□ -1.61
LSM5-209ENST00000468872 GSDMBQ8TAX9 411 aa5.02□□□□□ -1.61
LSM5-209ENST00000468872 PGAP3Q96FM1 320 aaPredicted RBP5.02□□□□□ -1.61
LSM5-209ENST00000468872 CNDP2Q96KP4 475 aaKnown RBP5.02□□□□□ -1.61
LSM5-209ENST00000468872 DACH2Q96NX9 599 aa5.02□□□□□ -1.61
LSM5-209ENST00000468872 CSF3RQ99062 836 aa5.02□□□□□ -1.61
LSM5-209ENST00000468872 DDOQ99489 341 aa5.02□□□□□ -1.61
LSM5-209ENST00000468872 NTPCRQ9BSD7 190 aaKnown RBP5.02□□□□□ -1.61
LSM5-209ENST00000468872 SF3B5Q9BWJ5 86 aaKnown RBP5.02□□□□□ -1.61
LSM5-209ENST00000468872 RTN4RQ9BZR6 473 aa5.02□□□□□ -1.61
LSM5-209ENST00000468872 OR10A4Q9H209 315 aa5.02□□□□□ -1.61
LSM5-209ENST00000468872 PPIL3Q9H2H8 161 aaKnown RBP5.02□□□□□ -1.61
LSM5-209ENST00000468872 CCDC177Q9NQR7 707 aaPredicted RBP5.02□□□□□ -1.61
LSM5-209ENST00000468872 HIF1ANQ9NWT6 349 aa5.02□□□□□ -1.61
LSM5-209ENST00000468872 DBNLQ9UJU6 430 aaKnown RBP5.02□□□□□ -1.61
LSM5-209ENST00000468872 MYO6Q9UM54 1294 aa5.02□□□□□ -1.61
LSM5-209ENST00000468872 ZNF148Q9UQR1 794 aa5.02□□□□□ -1.61
LSM5-209ENST00000468872 WBP11Q9Y2W2 641 aaKnown RBP5.02□□□□□ -1.61
LSM5-209ENST00000468872 A6NL46 340 aa5.01□□□□□ -1.61
LSM5-209ENST00000468872 FAM90A26D6RGX4 464 aa5.01□□□□□ -1.61
LSM5-209ENST00000468872 H7C0S8 307 aa5.01□□□□□ -1.61
LSM5-209ENST00000468872 PSMD10O75832 226 aa5.01□□□□□ -1.61
LSM5-209ENST00000468872 GH2P01242 217 aa5.01□□□□□ -1.61
LSM5-209ENST00000468872 TPOP07202 933 aa5.01□□□□□ -1.61
LSM5-209ENST00000468872 ABCB1P08183 1280 aaPredicted RBP5.01□□□□□ -1.61
LSM5-209ENST00000468872 UGT1A1P22309 533 aa5.01□□□□□ -1.61
LSM5-209ENST00000468872 TNFRSF8P28908 595 aa5.01□□□□□ -1.61
LSM5-209ENST00000468872 PCYT1AP49585 367 aa5.01□□□□□ -1.61
LSM5-209ENST00000468872 CLCNKAP51800 687 aa5.01□□□□□ -1.61
LSM5-209ENST00000468872 KRTAP10-7P60409 375 aaPredicted RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms