RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 MTA2O94776 668 aa20.79■□□□□ 0.92
COL9A3-207ENST00000467819 KRT1P04264 644 aa20.79■□□□□ 0.92
COL9A3-207ENST00000467819 CSRP3P50461 194 aa20.79■□□□□ 0.92
COL9A3-207ENST00000467819 INSCQ1MX18 579 aa20.79■□□□□ 0.92
COL9A3-207ENST00000467819 ASTE1Q2TB18 679 aaPredicted RBP20.79■□□□□ 0.92
COL9A3-207ENST00000467819 SLC9A4Q6AI14 798 aa20.79■□□□□ 0.92
COL9A3-207ENST00000467819 ADGRG6Q86SQ4 1221 aa20.79■□□□□ 0.92
COL9A3-207ENST00000467819 SLC35G2Q8TBE7 412 aa20.79■□□□□ 0.92
COL9A3-207ENST00000467819 PLEKHG4BQ96PX9 1271 aa20.79■□□□□ 0.92
COL9A3-207ENST00000467819 MAK16Q9BXY0 300 aaKnown RBP20.79■□□□□ 0.92
COL9A3-207ENST00000467819 GPR63Q9BZJ6 419 aa20.79■□□□□ 0.92
COL9A3-207ENST00000467819 GPN2Q9H9Y4 310 aaPredicted RBP20.79■□□□□ 0.92
COL9A3-207ENST00000467819 TRIM39Q9HCM9 518 aa20.79■□□□□ 0.92
COL9A3-207ENST00000467819 IL17BQ9UHF5 180 aa20.79■□□□□ 0.92
COL9A3-207ENST00000467819 ADGRG1Q9Y653 693 aa20.79■□□□□ 0.92
COL9A3-207ENST00000467819 LOC101059948A0A1B0GTJ6 334 aa20.78■□□□□ 0.92
COL9A3-207ENST00000467819 LILRA5A6NI73 299 aa20.78■□□□□ 0.92
COL9A3-207ENST00000467819 C3orf70A6NLC5 250 aaPredicted RBP20.78■□□□□ 0.92
COL9A3-207ENST00000467819 ZNF487B1APH4 448 aa20.78■□□□□ 0.92
COL9A3-207ENST00000467819 AKR1B10O60218 316 aa20.78■□□□□ 0.92
COL9A3-207ENST00000467819 TPM3P06753 285 aa20.78■□□□□ 0.92
COL9A3-207ENST00000467819 PRKAR1AP10644 381 aa20.78■□□□□ 0.92
COL9A3-207ENST00000467819 GFERP55789 205 aa20.78■□□□□ 0.92
COL9A3-207ENST00000467819 POLE2P56282 527 aa20.78■□□□□ 0.92
COL9A3-207ENST00000467819 DCDC1P59894 354 aa20.78■□□□□ 0.92
COL9A3-207ENST00000467819 DYNLT1P63172 113 aa20.78■□□□□ 0.92
COL9A3-207ENST00000467819 UBE2IP63279 158 aaKnown RBP20.78■□□□□ 0.92
COL9A3-207ENST00000467819 PDK1Q15118 436 aa20.78■□□□□ 0.92
COL9A3-207ENST00000467819 SEPT7Q16181 437 aaKnown RBP20.78■□□□□ 0.92
COL9A3-207ENST00000467819 TIPARPQ7Z3E1 657 aaKnown RBP20.78■□□□□ 0.92
COL9A3-207ENST00000467819 RFX6Q8HWS3 928 aa20.78■□□□□ 0.92
COL9A3-207ENST00000467819 TRIM48Q8IWZ4 208 aa20.78■□□□□ 0.92
COL9A3-207ENST00000467819 UNC5BQ8IZJ1 945 aa20.78■□□□□ 0.92
COL9A3-207ENST00000467819 TRAM1L1Q8N609 369 aa20.78■□□□□ 0.92
COL9A3-207ENST00000467819 AVL9Q8NBF6 648 aa20.78■□□□□ 0.92
COL9A3-207ENST00000467819 SPATA22Q8NHS9 363 aa20.78■□□□□ 0.92
COL9A3-207ENST00000467819 GLYATL1Q969I3 302 aa20.78■□□□□ 0.92
COL9A3-207ENST00000467819 KIAA1143Q96AT1 154 aaPredicted RBP20.78■□□□□ 0.92
COL9A3-207ENST00000467819 SPRY4Q9C004 299 aa20.78■□□□□ 0.92
COL9A3-207ENST00000467819 ADNPQ9H2P0 1102 aa20.78■□□□□ 0.92
COL9A3-207ENST00000467819 EPB41L1Q9H4G0 881 aa20.78■□□□□ 0.92
COL9A3-207ENST00000467819 MAGEE1Q9HCI5 957 aa20.78■□□□□ 0.92
COL9A3-207ENST00000467819 FBXO8Q9NRD0 319 aa20.78■□□□□ 0.92
COL9A3-207ENST00000467819 SCHIP1Q9P0W5 487 aaPredicted RBP20.78■□□□□ 0.92
COL9A3-207ENST00000467819 SLC23A2Q9UGH3 650 aa20.78■□□□□ 0.92
COL9A3-207ENST00000467819 DNAJC16Q9Y2G8 782 aa20.78■□□□□ 0.92
COL9A3-207ENST00000467819 PPP1R12AO14974 1030 aaPredicted RBP20.77■□□□□ 0.92
COL9A3-207ENST00000467819 POLR1CO15160 346 aaPredicted RBP20.77■□□□□ 0.92
COL9A3-207ENST00000467819 NKX2-8O15522 239 aa20.77■□□□□ 0.92
COL9A3-207ENST00000467819 MTX2O75431 263 aa20.77■□□□□ 0.92
COL9A3-207ENST00000467819 STK17BO94768 372 aa20.77■□□□□ 0.92
COL9A3-207ENST00000467819 MT-CYBP00156 380 aaPredicted RBP20.77■□□□□ 0.92
COL9A3-207ENST00000467819 TNNT1P13805 278 aa20.77■□□□□ 0.92
COL9A3-207ENST00000467819 TYRP1P17643 537 aa20.77■□□□□ 0.92
COL9A3-207ENST00000467819 MAP4P27816 1152 aaKnown RBP20.77■□□□□ 0.92
COL9A3-207ENST00000467819 CLCNKAP51800 687 aa20.77■□□□□ 0.92
COL9A3-207ENST00000467819 CDK18Q07002 472 aa20.77■□□□□ 0.92
COL9A3-207ENST00000467819 KCNAB2Q13303 367 aa20.77■□□□□ 0.92
COL9A3-207ENST00000467819 TMC3Q7Z5M5 1100 aa20.77■□□□□ 0.92
COL9A3-207ENST00000467819 LRRTM4Q86VH4 590 aa20.77■□□□□ 0.92
COL9A3-207ENST00000467819 PTRH1Q86Y79 214 aaKnown RBP20.77■□□□□ 0.92
COL9A3-207ENST00000467819 PLXDC1Q8IUK5 500 aa20.77■□□□□ 0.92
COL9A3-207ENST00000467819 OR8K1Q8NGG5 319 aa20.77■□□□□ 0.92
COL9A3-207ENST00000467819 RNF25Q96BH1 459 aaPredicted RBP20.77■□□□□ 0.92
COL9A3-207ENST00000467819 RNF31Q96EP0 1072 aa20.77■□□□□ 0.92
COL9A3-207ENST00000467819 SLC45A3Q96JT2 553 aa20.77■□□□□ 0.92
COL9A3-207ENST00000467819 OLFM3Q96PB7 478 aa20.77■□□□□ 0.92
COL9A3-207ENST00000467819 DNAJC7Q99615 494 aa20.77■□□□□ 0.92
COL9A3-207ENST00000467819 ZPBPQ9BS86 351 aa20.77■□□□□ 0.92
COL9A3-207ENST00000467819 SLC25A51Q9H1U9 297 aa20.77■□□□□ 0.92
COL9A3-207ENST00000467819 RAD18Q9NS91 495 aa20.77■□□□□ 0.92
COL9A3-207ENST00000467819 SPTLC3Q9NUV7 552 aa20.77■□□□□ 0.92
COL9A3-207ENST00000467819 PTPN13Q12923 2485 aa20.77■□□□□ 0.91
COL9A3-207ENST00000467819 MN1Q10571 1320 aaPredicted RBP20.77■□□□□ 0.91
COL9A3-207ENST00000467819 SSU72P8A0A1W2PR75 194 aa20.76■□□□□ 0.91
COL9A3-207ENST00000467819 PDZK1P1A8MUH7 402 aa20.76■□□□□ 0.91
COL9A3-207ENST00000467819 CHUKO15111 745 aa20.76■□□□□ 0.91
COL9A3-207ENST00000467819 KMOO15229 486 aa20.76■□□□□ 0.91
COL9A3-207ENST00000467819 CAPN5O15484 640 aaPredicted RBP20.76■□□□□ 0.91
COL9A3-207ENST00000467819 VIPP01282 170 aa20.76■□□□□ 0.91
COL9A3-207ENST00000467819 ZNF7P17097 686 aaPredicted RBP20.76■□□□□ 0.91
COL9A3-207ENST00000467819 BPIP17213 487 aa20.76■□□□□ 0.91
COL9A3-207ENST00000467819 CCR10P46092 362 aa20.76■□□□□ 0.91
COL9A3-207ENST00000467819 ODF2Q5BJF6 829 aa20.76■□□□□ 0.91
COL9A3-207ENST00000467819 PDPK2PQ6A1A2 396 aa20.76■□□□□ 0.91
COL9A3-207ENST00000467819 CATSPER2Q96P56 530 aa20.76■□□□□ 0.91
COL9A3-207ENST00000467819 ZNHIT6Q9NWK9 470 aaKnown RBP20.76■□□□□ 0.91
COL9A3-207ENST00000467819 OGFRQ9NZT2 677 aa20.76■□□□□ 0.91
COL9A3-207ENST00000467819 NFKBIL1Q9UBC1 381 aaPredicted RBP20.76■□□□□ 0.91
COL9A3-207ENST00000467819 TMEM184BQ9Y519 407 aaPredicted RBP20.76■□□□□ 0.91
COL9A3-207ENST00000467819 GPR89AB7ZAQ6 455 aa20.75■□□□□ 0.91
COL9A3-207ENST00000467819 PMPCBO75439 489 aa20.75■□□□□ 0.91
COL9A3-207ENST00000467819 GPR89BP0CG08 455 aa20.75■□□□□ 0.91
COL9A3-207ENST00000467819 ZFXP17010 805 aaPredicted RBP20.75■□□□□ 0.91
COL9A3-207ENST00000467819 SLC19A1P41440 591 aa20.75■□□□□ 0.91
COL9A3-207ENST00000467819 NOP2P46087 812 aaKnown RBP20.75■□□□□ 0.91
COL9A3-207ENST00000467819 FOXM1Q08050 763 aa20.75■□□□□ 0.91
COL9A3-207ENST00000467819 KHDC1Q4VXA5 237 aaKnown RBP20.75■□□□□ 0.91
COL9A3-207ENST00000467819 CCDC70Q6NSX1 233 aa20.75■□□□□ 0.91
COL9A3-207ENST00000467819 TMEM26Q6ZUK4 368 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms