RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 NCKIPSDQ9NZQ3 722 aa13.46□□□□□ -0.25
SSBP1-206ENST00000467681 APOBEC2Q9Y235 224 aaKnown RBP13.46□□□□□ -0.25
SSBP1-206ENST00000467681 PRKAB1Q9Y478 270 aa13.46□□□□□ -0.25
SSBP1-206ENST00000467681 TCAF1Q9Y4C2 921 aa13.46□□□□□ -0.25
SSBP1-206ENST00000467681 PCDHGA1Q9Y5H4 931 aa13.46□□□□□ -0.25
SSBP1-206ENST00000467681 PCYT1BQ9Y5K3 369 aaPredicted RBP13.46□□□□□ -0.25
SSBP1-206ENST00000467681 ST14Q9Y5Y6 855 aa13.46□□□□□ -0.25
SSBP1-206ENST00000467681 U3KQA8 63 aa13.46□□□□□ -0.25
SSBP1-206ENST00000467681 CACNA1AO00555 2505 aa13.45□□□□□ -0.26
SSBP1-206ENST00000467681 CCDC162PA2VCL2 907 aa13.45□□□□□ -0.26
SSBP1-206ENST00000467681 GPR39O43194 453 aa13.45□□□□□ -0.26
SSBP1-206ENST00000467681 FTH1P19P0C7X4 201 aa13.45□□□□□ -0.26
SSBP1-206ENST00000467681 MLNP12872 115 aa13.45□□□□□ -0.26
SSBP1-206ENST00000467681 MYF5P13349 255 aa13.45□□□□□ -0.26
SSBP1-206ENST00000467681 ITGALP20701 1170 aa13.45□□□□□ -0.26
SSBP1-206ENST00000467681 ACP1P24666 158 aa13.45□□□□□ -0.26
SSBP1-206ENST00000467681 MGAT1P26572 445 aa13.45□□□□□ -0.26
SSBP1-206ENST00000467681 AK4P27144 223 aaPredicted RBP13.45□□□□□ -0.26
SSBP1-206ENST00000467681 MC4RP32245 332 aa13.45□□□□□ -0.26
SSBP1-206ENST00000467681 RPIAP49247 311 aa13.45□□□□□ -0.26
SSBP1-206ENST00000467681 DUSP3P51452 185 aaPredicted RBP13.45□□□□□ -0.26
SSBP1-206ENST00000467681 DAB2P98082 770 aa13.45□□□□□ -0.26
SSBP1-206ENST00000467681 DR1Q01658 176 aa13.45□□□□□ -0.26
SSBP1-206ENST00000467681 ACVR1Q04771 509 aa13.45□□□□□ -0.26
SSBP1-206ENST00000467681 DNAJC3Q13217 504 aa13.45□□□□□ -0.26
SSBP1-206ENST00000467681 ILKQ13418 452 aa13.45□□□□□ -0.26
SSBP1-206ENST00000467681 RNASEH2BQ5TBB1 312 aaKnown RBP13.45□□□□□ -0.26
SSBP1-206ENST00000467681 ARMC3Q5W041 872 aa13.45□□□□□ -0.26
SSBP1-206ENST00000467681 JAMLQ86YT9 394 aa13.45□□□□□ -0.26
SSBP1-206ENST00000467681 PPIL6Q8IXY8 311 aa13.45□□□□□ -0.26
SSBP1-206ENST00000467681 RASGEF1AQ8N9B8 481 aa13.45□□□□□ -0.26
SSBP1-206ENST00000467681 OR13J1Q8NGT2 312 aa13.45□□□□□ -0.26
SSBP1-206ENST00000467681 HDAC10Q969S8 669 aa13.45□□□□□ -0.26
SSBP1-206ENST00000467681 ULK4Q96C45 1275 aa13.45□□□□□ -0.26
SSBP1-206ENST00000467681 ZNF778Q96MU6 729 aa13.45□□□□□ -0.26
SSBP1-206ENST00000467681 TTC25Q96NG3 672 aa13.45□□□□□ -0.26
SSBP1-206ENST00000467681 KRT12Q99456 494 aa13.45□□□□□ -0.26
SSBP1-206ENST00000467681 KIFC1Q9BW19 673 aa13.45□□□□□ -0.26
SSBP1-206ENST00000467681 XAB2Q9HCS7 855 aaKnown RBP13.45□□□□□ -0.26
SSBP1-206ENST00000467681 EVA1BQ9NVM1 165 aa13.45□□□□□ -0.26
SSBP1-206ENST00000467681 TAAR2Q9P1P5 351 aa13.45□□□□□ -0.26
SSBP1-206ENST00000467681 GULP1Q9UBP9 304 aa13.45□□□□□ -0.26
SSBP1-206ENST00000467681 SLC2A6Q9UGQ3 507 aa13.45□□□□□ -0.26
SSBP1-206ENST00000467681 ASIC3Q9UHC3 531 aa13.45□□□□□ -0.26
SSBP1-206ENST00000467681 CDC23Q9UJX2 597 aa13.45□□□□□ -0.26
SSBP1-206ENST00000467681 PADI4Q9UM07 663 aa13.45□□□□□ -0.26
SSBP1-206ENST00000467681 SLC30A1Q9Y6M5 507 aa13.45□□□□□ -0.26
SSBP1-206ENST00000467681 UNC13CQ8NB66 2214 aa13.45□□□□□ -0.26
SSBP1-206ENST00000467681 LAMA1P25391 3075 aa13.45□□□□□ -0.26
SSBP1-206ENST00000467681 TPRP12270 2363 aaKnown RBP13.44□□□□□ -0.26
SSBP1-206ENST00000467681 TRBV5-4A0A0C4DH59 114 aa13.44□□□□□ -0.26
SSBP1-206ENST00000467681 MAGEB16A2A368 324 aa13.44□□□□□ -0.26
SSBP1-206ENST00000467681 CCDC78A2IDD5 438 aa13.44□□□□□ -0.26
SSBP1-206ENST00000467681 SDR42E2A6NKP2 422 aa13.44□□□□□ -0.26
SSBP1-206ENST00000467681 KIF2AO00139 706 aaPredicted RBP13.44□□□□□ -0.26
SSBP1-206ENST00000467681 AVILO75366 819 aa13.44□□□□□ -0.26
SSBP1-206ENST00000467681 TMEM63AO94886 807 aa13.44□□□□□ -0.26
SSBP1-206ENST00000467681 CDK4P11802 303 aa13.44□□□□□ -0.26
SSBP1-206ENST00000467681 ACADVLP49748 655 aa13.44□□□□□ -0.26
SSBP1-206ENST00000467681 CDKN1CP49918 316 aaPredicted RBP13.44□□□□□ -0.26
SSBP1-206ENST00000467681 CLCNKAP51800 687 aa13.44□□□□□ -0.26
SSBP1-206ENST00000467681 CRADDP78560 199 aa13.44□□□□□ -0.26
SSBP1-206ENST00000467681 CACNG1Q06432 222 aa13.44□□□□□ -0.26
SSBP1-206ENST00000467681 DHX34Q14147 1143 aaKnown RBP13.44□□□□□ -0.26
SSBP1-206ENST00000467681 NR0B2Q15466 257 aa13.44□□□□□ -0.26
SSBP1-206ENST00000467681 ZRANB3Q5FWF4 1079 aa13.44□□□□□ -0.26
SSBP1-206ENST00000467681 SLC30A9Q6PML9 568 aa13.44□□□□□ -0.26
SSBP1-206ENST00000467681 TMEM220Q6QAJ8 160 aa13.44□□□□□ -0.26
SSBP1-206ENST00000467681 PCGF5Q86SE9 256 aa13.44□□□□□ -0.26
SSBP1-206ENST00000467681 ZNF547Q8IVP9 402 aa13.44□□□□□ -0.26
SSBP1-206ENST00000467681 SLC35F3Q8IY50 421 aa13.44□□□□□ -0.26
SSBP1-206ENST00000467681 NXPE1Q8N323 547 aa13.44□□□□□ -0.26
SSBP1-206ENST00000467681 ARL10Q8N8L6 244 aa13.44□□□□□ -0.26
SSBP1-206ENST00000467681 PNPLA1Q8N8W4 532 aa13.44□□□□□ -0.26
SSBP1-206ENST00000467681 PPHLN1Q8NEY8 458 aaKnown RBP13.44□□□□□ -0.26
SSBP1-206ENST00000467681 GPR156Q8NFN8 814 aa13.44□□□□□ -0.26
SSBP1-206ENST00000467681 HEXDCQ8WVB3 486 aa13.44□□□□□ -0.26
SSBP1-206ENST00000467681 ADAMTS14Q8WXS8 1223 aa13.44□□□□□ -0.26
SSBP1-206ENST00000467681 SGSM3Q96HU1 749 aa13.44□□□□□ -0.26
SSBP1-206ENST00000467681 ZCCHC2Q9C0B9 1178 aaKnown RBP13.44□□□□□ -0.26
SSBP1-206ENST00000467681 DPEP2Q9H4A9 486 aa13.44□□□□□ -0.26
SSBP1-206ENST00000467681 MRM3Q9HC36 420 aaKnown RBP13.44□□□□□ -0.26
SSBP1-206ENST00000467681 TREX1Q9NSU2 369 aa13.44□□□□□ -0.26
SSBP1-206ENST00000467681 SLC23A2Q9UGH3 650 aa13.44□□□□□ -0.26
SSBP1-206ENST00000467681 CRLS1Q9UJA2 301 aa13.44□□□□□ -0.26
SSBP1-206ENST00000467681 DNMT3AQ9Y6K1 912 aaPredicted RBP13.44□□□□□ -0.26
SSBP1-206ENST00000467681 CPED1A4D0V7 1026 aa13.43□□□□□ -0.26
SSBP1-206ENST00000467681 EME2A4GXA9 379 aaPredicted RBP13.43□□□□□ -0.26
SSBP1-206ENST00000467681 DNALI1O14645 258 aaPredicted RBP13.43□□□□□ -0.26
SSBP1-206ENST00000467681 KMOO15229 486 aa13.43□□□□□ -0.26
SSBP1-206ENST00000467681 TTI1O43156 1089 aa13.43□□□□□ -0.26
SSBP1-206ENST00000467681 NOBOXO60393 691 aa13.43□□□□□ -0.26
SSBP1-206ENST00000467681 KCNJ13O60928 360 aa13.43□□□□□ -0.26
SSBP1-206ENST00000467681 POP7O75817 140 aaKnown RBP13.43□□□□□ -0.26
SSBP1-206ENST00000467681 URI1O94763 535 aaPredicted RBP13.43□□□□□ -0.26
SSBP1-206ENST00000467681 TRIM16O95361 564 aa13.43□□□□□ -0.26
SSBP1-206ENST00000467681 ADRB1P08588 477 aa13.43□□□□□ -0.26
SSBP1-206ENST00000467681 ACP5P13686 325 aa13.43□□□□□ -0.26
SSBP1-206ENST00000467681 ZNF7P17097 686 aaPredicted RBP13.43□□□□□ -0.26
SSBP1-206ENST00000467681 MSH3P20585 1137 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms