RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 CKMT1AP12532 417 aa10.92□□□□□ -0.66
MSH5-212ENST00000467319 ITGALP20701 1170 aa10.92□□□□□ -0.66
MSH5-212ENST00000467319 MGAT1P26572 445 aa10.92□□□□□ -0.66
MSH5-212ENST00000467319 ARNTP27540 789 aa10.92□□□□□ -0.66
MSH5-212ENST00000467319 MC4RP32245 332 aa10.92□□□□□ -0.66
MSH5-212ENST00000467319 FOXN2P32314 431 aa10.92□□□□□ -0.66
MSH5-212ENST00000467319 NPY2RP49146 381 aa10.92□□□□□ -0.66
MSH5-212ENST00000467319 SESN2P58004 480 aaPredicted RBP10.92□□□□□ -0.66
MSH5-212ENST00000467319 CRADDP78560 199 aa10.92□□□□□ -0.66
MSH5-212ENST00000467319 SIM1P81133 766 aaPredicted RBP10.92□□□□□ -0.66
MSH5-212ENST00000467319 B4GALNT1Q00973 533 aa10.92□□□□□ -0.66
MSH5-212ENST00000467319 C2orf54Q08AI8 447 aa10.92□□□□□ -0.66
MSH5-212ENST00000467319 ILF3Q12906 894 aaKnown RBP eCLIP10.92□□□□□ -0.66
MSH5-212ENST00000467319 TRIP6Q15654 476 aaKnown RBP10.92□□□□□ -0.66
MSH5-212ENST00000467319 WHAMMP3Q1A5X7 153 aa10.92□□□□□ -0.66
MSH5-212ENST00000467319 SKIDA1Q1XH10 827 aa10.92□□□□□ -0.66
MSH5-212ENST00000467319 GPR33Q49SQ1 333 aa10.92□□□□□ -0.66
MSH5-212ENST00000467319 PCID2Q5JVF3 399 aa10.92□□□□□ -0.66
MSH5-212ENST00000467319 ZNF648Q5T619 568 aaPredicted RBP10.92□□□□□ -0.66
MSH5-212ENST00000467319 MARK2Q7KZI7 788 aaKnown RBP10.92□□□□□ -0.66
MSH5-212ENST00000467319 DGLUCYQ7Z3D6 616 aa10.92□□□□□ -0.66
MSH5-212ENST00000467319 SNX20Q7Z614 316 aa10.92□□□□□ -0.66
MSH5-212ENST00000467319 C11orf96Q7Z7L8 435 aa10.92□□□□□ -0.66
MSH5-212ENST00000467319 SLC35F3Q8IY50 421 aa10.92□□□□□ -0.66
MSH5-212ENST00000467319 PIANPQ8IYJ0 282 aa10.92□□□□□ -0.66
MSH5-212ENST00000467319 AGGF1Q8N302 714 aaeCLIP10.92□□□□□ -0.66
MSH5-212ENST00000467319 ARL10Q8N8L6 244 aa10.92□□□□□ -0.66
MSH5-212ENST00000467319 KYQ8NBH2 561 aa10.92□□□□□ -0.66
MSH5-212ENST00000467319 PPHLN1Q8NEY8 458 aaKnown RBP10.92□□□□□ -0.66
MSH5-212ENST00000467319 ZNF398Q8TD17 642 aa10.92□□□□□ -0.66
MSH5-212ENST00000467319 ULK4Q96C45 1275 aa10.92□□□□□ -0.66
MSH5-212ENST00000467319 CCDC97Q96F63 343 aaPredicted RBP10.92□□□□□ -0.66
MSH5-212ENST00000467319 CDKN2AIPNLQ96HQ2 116 aa10.92□□□□□ -0.66
MSH5-212ENST00000467319 CNDP2Q96KP4 475 aaKnown RBP10.92□□□□□ -0.66
MSH5-212ENST00000467319 APOLD1Q96LR9 279 aa10.92□□□□□ -0.66
MSH5-212ENST00000467319 KRT12Q99456 494 aa10.92□□□□□ -0.66
MSH5-212ENST00000467319 GSDMCQ9BYG8 508 aa10.92□□□□□ -0.66
MSH5-212ENST00000467319 ZCCHC2Q9C0B9 1178 aaKnown RBP10.92□□□□□ -0.66
MSH5-212ENST00000467319 SUDS3Q9H7L9 328 aaPredicted RBP10.92□□□□□ -0.66
MSH5-212ENST00000467319 SOX13Q9UN79 622 aa10.92□□□□□ -0.66
MSH5-212ENST00000467319 ZFC3H1O60293 1989 aaKnown RBP10.92□□□□□ -0.66
MSH5-212ENST00000467319 GOLGA4Q13439 2230 aaKnown RBP10.92□□□□□ -0.66
MSH5-212ENST00000467319 CCDC78A2IDD5 438 aa10.91□□□□□ -0.66
MSH5-212ENST00000467319 NOBOXO60393 691 aa10.91□□□□□ -0.66
MSH5-212ENST00000467319 AVILO75366 819 aa10.91□□□□□ -0.66
MSH5-212ENST00000467319 ASMTLO95671 621 aa10.91□□□□□ -0.66
MSH5-212ENST00000467319 LDOC1O95751 146 aaPredicted RBP10.91□□□□□ -0.66
MSH5-212ENST00000467319 ANXA6P08133 673 aa10.91□□□□□ -0.66
MSH5-212ENST00000467319 FTH1P19P0C7X4 201 aa10.91□□□□□ -0.66
MSH5-212ENST00000467319 CTSEP14091 401 aa10.91□□□□□ -0.66
MSH5-212ENST00000467319 CKMT2P17540 419 aa10.91□□□□□ -0.66
MSH5-212ENST00000467319 ACP1P24666 158 aa10.91□□□□□ -0.66
MSH5-212ENST00000467319 ACRV1P26436 265 aa10.91□□□□□ -0.66
MSH5-212ENST00000467319 CLCNKAP51800 687 aa10.91□□□□□ -0.66
MSH5-212ENST00000467319 CTSCP53634 463 aa10.91□□□□□ -0.66
MSH5-212ENST00000467319 TMPRSS15P98073 1019 aa10.91□□□□□ -0.66
MSH5-212ENST00000467319 CTBSQ01459 385 aa10.91□□□□□ -0.66
MSH5-212ENST00000467319 CACNG1Q06432 222 aa10.91□□□□□ -0.66
MSH5-212ENST00000467319 CKAP4Q07065 602 aaKnown RBP10.91□□□□□ -0.66
MSH5-212ENST00000467319 TMEM115Q12893 351 aaPredicted RBP10.91□□□□□ -0.66
MSH5-212ENST00000467319 MORF4L2Q15014 288 aa10.91□□□□□ -0.66
MSH5-212ENST00000467319 TCEA2Q15560 299 aa10.91□□□□□ -0.66
MSH5-212ENST00000467319 IZUMO3Q5VZ72 239 aa10.91□□□□□ -0.66
MSH5-212ENST00000467319 AFTPHQ6ULP2 937 aa10.91□□□□□ -0.66
MSH5-212ENST00000467319 ERMP1Q7Z2K6 904 aa10.91□□□□□ -0.66
MSH5-212ENST00000467319 C17orf82Q86X59 251 aaPredicted RBP10.91□□□□□ -0.66
MSH5-212ENST00000467319 GKN2Q86XP6 184 aa10.91□□□□□ -0.66
MSH5-212ENST00000467319 MPP5Q8N3R9 675 aa10.91□□□□□ -0.66
MSH5-212ENST00000467319 RASGEF1AQ8N9B8 481 aa10.91□□□□□ -0.66
MSH5-212ENST00000467319 TIMM29Q9BSF4 260 aa10.91□□□□□ -0.66
MSH5-212ENST00000467319 ASB8Q9H765 288 aa10.91□□□□□ -0.66
MSH5-212ENST00000467319 CHRAC1Q9NRG0 131 aa10.91□□□□□ -0.66
MSH5-212ENST00000467319 NCKIPSDQ9NZQ3 722 aa10.91□□□□□ -0.66
MSH5-212ENST00000467319 BFARQ9NZS9 450 aa10.91□□□□□ -0.66
MSH5-212ENST00000467319 TAAR2Q9P1P5 351 aa10.91□□□□□ -0.66
MSH5-212ENST00000467319 WASF3Q9UPY6 502 aa10.91□□□□□ -0.66
MSH5-212ENST00000467319 PRKAB1Q9Y478 270 aa10.91□□□□□ -0.66
MSH5-212ENST00000467319 PCDHGA1Q9Y5H4 931 aa10.91□□□□□ -0.66
MSH5-212ENST00000467319 MRFAP1Q9Y605 127 aa10.91□□□□□ -0.66
MSH5-212ENST00000467319 FAM187AA6NFU0 413 aa10.9□□□□□ -0.66
MSH5-212ENST00000467319 OR51F1A6NGY5 319 aa10.9□□□□□ -0.66
MSH5-212ENST00000467319 GOLGA8MH3BSY2 632 aa10.9□□□□□ -0.66
MSH5-212ENST00000467319 GRID2O43424 1007 aa10.9□□□□□ -0.66
MSH5-212ENST00000467319 RAD51CO43502 376 aa10.9□□□□□ -0.66
MSH5-212ENST00000467319 CDK14O94921 469 aa10.9□□□□□ -0.66
MSH5-212ENST00000467319 PRSS56P0CW18 603 aa10.9□□□□□ -0.66
MSH5-212ENST00000467319 AK4P27144 223 aaPredicted RBP10.9□□□□□ -0.66
MSH5-212ENST00000467319 RPL21P46778 160 aaKnown RBP10.9□□□□□ -0.66
MSH5-212ENST00000467319 CDKN1CP49918 316 aaPredicted RBP10.9□□□□□ -0.66
MSH5-212ENST00000467319 TERF1P54274 439 aa10.9□□□□□ -0.66
MSH5-212ENST00000467319 SARNPP82979 210 aaKnown RBP10.9□□□□□ -0.66
MSH5-212ENST00000467319 DMPKQ09013 629 aa10.9□□□□□ -0.66
MSH5-212ENST00000467319 DNAJC3Q13217 504 aa10.9□□□□□ -0.66
MSH5-212ENST00000467319 DBN1Q16643 649 aa10.9□□□□□ -0.66
MSH5-212ENST00000467319 ZNF658BQ4V348 819 aaPredicted RBP10.9□□□□□ -0.66
MSH5-212ENST00000467319 BCL7AQ4VC05 210 aa10.9□□□□□ -0.66
MSH5-212ENST00000467319 HIBCHQ6NVY1 386 aaPredicted RBP10.9□□□□□ -0.66
MSH5-212ENST00000467319 OGFOD3Q6PK18 319 aa10.9□□□□□ -0.66
MSH5-212ENST00000467319 CRTC3Q6UUV7 619 aa10.9□□□□□ -0.66
MSH5-212ENST00000467319 XKR5Q6UX68 686 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms