RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 ANKRD28O15084 1053 aa4.32□□□□□ -1.72
CDC42BPA-211ENST00000466538 IPO8O15397 1037 aaKnown RBP4.32□□□□□ -1.72
CDC42BPA-211ENST00000466538 NDUFS4O43181 175 aa4.32□□□□□ -1.72
CDC42BPA-211ENST00000466538 RFPL2O75678 378 aa4.32□□□□□ -1.72
CDC42BPA-211ENST00000466538 OAZ2O95190 189 aa4.32□□□□□ -1.72
CDC42BPA-211ENST00000466538 GJA1P17302 382 aa4.32□□□□□ -1.72
CDC42BPA-211ENST00000466538 ARRB2P32121 409 aa4.32□□□□□ -1.72
CDC42BPA-211ENST00000466538 TAS2R38P59533 333 aa4.32□□□□□ -1.72
CDC42BPA-211ENST00000466538 CRYZQ08257 329 aaKnown RBP4.32□□□□□ -1.72
CDC42BPA-211ENST00000466538 GAGE2BQ13066 116 aa4.32□□□□□ -1.72
CDC42BPA-211ENST00000466538 ALCAMQ13740 583 aa4.32□□□□□ -1.72
CDC42BPA-211ENST00000466538 KRT33BQ14525 404 aa4.32□□□□□ -1.72
CDC42BPA-211ENST00000466538 OASLQ15646 514 aaKnown RBP4.32□□□□□ -1.72
CDC42BPA-211ENST00000466538 GAGE2EQ4V326 116 aa4.32□□□□□ -1.72
CDC42BPA-211ENST00000466538 ATP13A5Q4VNC0 1218 aa4.32□□□□□ -1.72
CDC42BPA-211ENST00000466538 ZDHHC20Q5W0Z9 365 aa4.32□□□□□ -1.72
CDC42BPA-211ENST00000466538 GAGE2AQ6NT46 116 aa4.32□□□□□ -1.72
CDC42BPA-211ENST00000466538 ANKRD23Q86SG2 305 aa4.32□□□□□ -1.72
CDC42BPA-211ENST00000466538 RASGEF1CQ8N431 466 aa4.32□□□□□ -1.72
CDC42BPA-211ENST00000466538 OR10S1Q8NGN2 331 aa4.32□□□□□ -1.72
CDC42BPA-211ENST00000466538 WASF1Q92558 559 aa4.32□□□□□ -1.72
CDC42BPA-211ENST00000466538 RHBDF1Q96CC6 855 aa4.32□□□□□ -1.72
CDC42BPA-211ENST00000466538 MTBPQ96DY7 904 aa4.32□□□□□ -1.72
CDC42BPA-211ENST00000466538 ZNF778Q96MU6 729 aa4.32□□□□□ -1.72
CDC42BPA-211ENST00000466538 ZMAT2Q96NC0 199 aaKnown RBP4.32□□□□□ -1.72
CDC42BPA-211ENST00000466538 DGAT2Q96PD7 388 aa4.32□□□□□ -1.72
CDC42BPA-211ENST00000466538 NEK1Q96PY6 1258 aa4.32□□□□□ -1.72
CDC42BPA-211ENST00000466538 SMC6Q96SB8 1091 aa4.32□□□□□ -1.72
CDC42BPA-211ENST00000466538 CDRT15Q96T59 188 aa4.32□□□□□ -1.72
CDC42BPA-211ENST00000466538 SEMA3CQ99985 751 aa4.32□□□□□ -1.72
CDC42BPA-211ENST00000466538 SLCO5A1Q9H2Y9 848 aa4.32□□□□□ -1.72
CDC42BPA-211ENST00000466538 RAD21L1Q9H4I0 556 aa4.32□□□□□ -1.72
CDC42BPA-211ENST00000466538 CHMP1AQ9HD42 196 aaPredicted RBP4.32□□□□□ -1.72
CDC42BPA-211ENST00000466538 ZCCHC17Q9NP64 241 aaKnown RBP4.32□□□□□ -1.72
CDC42BPA-211ENST00000466538 CRNNQ9UBG3 495 aaPredicted RBP4.32□□□□□ -1.72
CDC42BPA-211ENST00000466538 GAGE2DQ9UEU5 116 aa4.32□□□□□ -1.72
CDC42BPA-211ENST00000466538 IL17BQ9UHF5 180 aa4.32□□□□□ -1.72
CDC42BPA-211ENST00000466538 TSPYL4Q9UJ04 414 aa4.32□□□□□ -1.72
CDC42BPA-211ENST00000466538 FBXL2Q9UKC9 423 aa4.32□□□□□ -1.72
CDC42BPA-211ENST00000466538 MYO6Q9UM54 1294 aa4.32□□□□□ -1.72
CDC42BPA-211ENST00000466538 PCDHA7Q9UN72 937 aa4.32□□□□□ -1.72
CDC42BPA-211ENST00000466538 SNX9Q9Y5X1 595 aa4.32□□□□□ -1.72
CDC42BPA-211ENST00000466538 ASTN2O75129 1339 aaPredicted RBP4.31□□□□□ -1.72
CDC42BPA-211ENST00000466538 IGLV5-52A0A0A0MRZ9 124 aa4.31□□□□□ -1.72
CDC42BPA-211ENST00000466538 CLEC18AA5D8T8 446 aa4.31□□□□□ -1.72
CDC42BPA-211ENST00000466538 FAM90A10PA6NDY2 464 aa4.31□□□□□ -1.72
CDC42BPA-211ENST00000466538 CD8B2A6NJW9 211 aa4.31□□□□□ -1.72
CDC42BPA-211ENST00000466538 PRSS2P07478 247 aa4.31□□□□□ -1.72
CDC42BPA-211ENST00000466538 MYBL1P10243 752 aa4.31□□□□□ -1.72
CDC42BPA-211ENST00000466538 VPREB1P12018 145 aa4.31□□□□□ -1.72
CDC42BPA-211ENST00000466538 HRH2P25021 359 aa4.31□□□□□ -1.72
CDC42BPA-211ENST00000466538 LMO1P25800 156 aa4.31□□□□□ -1.72
CDC42BPA-211ENST00000466538 MATR3P43243 847 aaKnown RBP eCLIP4.31□□□□□ -1.72
CDC42BPA-211ENST00000466538 PEX5P50542 639 aa4.31□□□□□ -1.72
CDC42BPA-211ENST00000466538 PDE1BQ01064 536 aa4.31□□□□□ -1.72
CDC42BPA-211ENST00000466538 POU5F1Q01860 360 aaKnown RBP4.31□□□□□ -1.72
CDC42BPA-211ENST00000466538 MEP1AQ16819 746 aa4.31□□□□□ -1.72
CDC42BPA-211ENST00000466538 CBWD6Q4V339 395 aa4.31□□□□□ -1.72
CDC42BPA-211ENST00000466538 CBWD3Q5JTY5 395 aa4.31□□□□□ -1.72
CDC42BPA-211ENST00000466538 KCNT1Q5JUK3 1230 aa4.31□□□□□ -1.72
CDC42BPA-211ENST00000466538 CHST3Q7LGC8 479 aa4.31□□□□□ -1.72
CDC42BPA-211ENST00000466538 LDB1Q86U70 411 aaPredicted RBP4.31□□□□□ -1.72
CDC42BPA-211ENST00000466538 GPR180Q86V85 440 aa4.31□□□□□ -1.72
CDC42BPA-211ENST00000466538 GLCCI1Q86VQ1 547 aa4.31□□□□□ -1.72
CDC42BPA-211ENST00000466538 CEP97Q8IW35 865 aa4.31□□□□□ -1.72
CDC42BPA-211ENST00000466538 CLIP4Q8N3C7 705 aa4.31□□□□□ -1.72
CDC42BPA-211ENST00000466538 CLEC18CQ8NCF0 446 aa4.31□□□□□ -1.72
CDC42BPA-211ENST00000466538 LPGAT1Q92604 370 aa4.31□□□□□ -1.72
CDC42BPA-211ENST00000466538 CFAP57Q96MR6 1250 aa4.31□□□□□ -1.72
CDC42BPA-211ENST00000466538 QRFPRQ96P65 431 aa4.31□□□□□ -1.72
CDC42BPA-211ENST00000466538 FCRL4Q96PJ5 515 aa4.31□□□□□ -1.72
CDC42BPA-211ENST00000466538 OR1F2PQ96R84 312 aa4.31□□□□□ -1.72
CDC42BPA-211ENST00000466538 GFI1Q99684 422 aa4.31□□□□□ -1.72
CDC42BPA-211ENST00000466538 NTPCRQ9BSD7 190 aaKnown RBP4.31□□□□□ -1.72
CDC42BPA-211ENST00000466538 SPRY4Q9C004 299 aa4.31□□□□□ -1.72
CDC42BPA-211ENST00000466538 PPIL3Q9H2H8 161 aaKnown RBP4.31□□□□□ -1.72
CDC42BPA-211ENST00000466538 WNT16Q9UBV4 365 aa4.31□□□□□ -1.72
CDC42BPA-211ENST00000466538 DDX25Q9UHL0 483 aaKnown RBP4.31□□□□□ -1.72
CDC42BPA-211ENST00000466538 OSGIN1Q9UJX0 560 aa4.31□□□□□ -1.72
CDC42BPA-211ENST00000466538 PCDHGA5Q9Y5G8 931 aa4.31□□□□□ -1.72
CDC42BPA-211ENST00000466538 NFS1Q9Y697 457 aa4.31□□□□□ -1.72
CDC42BPA-211ENST00000466538 PRAG1Q86YV5 1406 aa4.3□□□□□ -1.72
CDC42BPA-211ENST00000466538 CLGNO14967 610 aa4.3□□□□□ -1.72
CDC42BPA-211ENST00000466538 PRAMEF11O60813 436 aa4.3□□□□□ -1.72
CDC42BPA-211ENST00000466538 ZNF217O75362 1048 aa4.3□□□□□ -1.72
CDC42BPA-211ENST00000466538 DDNO94850 711 aaPredicted RBP4.3□□□□□ -1.72
CDC42BPA-211ENST00000466538 QDPRP09417 244 aa4.3□□□□□ -1.72
CDC42BPA-211ENST00000466538 SCP2P22307 547 aa4.3□□□□□ -1.72
CDC42BPA-211ENST00000466538 PCYT1AP49585 367 aa4.3□□□□□ -1.72
CDC42BPA-211ENST00000466538 CCR3P51677 355 aa4.3□□□□□ -1.72
CDC42BPA-211ENST00000466538 CTSCP53634 463 aa4.3□□□□□ -1.72
CDC42BPA-211ENST00000466538 RAD23AP54725 363 aa4.3□□□□□ -1.72
CDC42BPA-211ENST00000466538 PLCB4Q15147 1175 aa4.3□□□□□ -1.72
CDC42BPA-211ENST00000466538 SNAPC1Q16533 368 aa4.3□□□□□ -1.72
CDC42BPA-211ENST00000466538 HLFQ16534 295 aa4.3□□□□□ -1.72
CDC42BPA-211ENST00000466538 CALCRLQ16602 461 aa4.3□□□□□ -1.72
CDC42BPA-211ENST00000466538 XKR9Q5GH70 373 aa4.3□□□□□ -1.72
CDC42BPA-211ENST00000466538 C1orf141Q5JVX7 400 aa4.3□□□□□ -1.72
CDC42BPA-211ENST00000466538 TRNP1Q6NT89 227 aa4.3□□□□□ -1.72
CDC42BPA-211ENST00000466538 RGMBQ6NW40 437 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms