RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 PRMT5O14744 637 aaPredicted RBP18.1■□□□□ 0.49
COL9A3-205ENST00000466192 UGT1A6P19224 532 aa18.1■□□□□ 0.49
COL9A3-205ENST00000466192 CHRM3P20309 590 aa18.1■□□□□ 0.49
COL9A3-205ENST00000466192 UGT1A1P22309 533 aa18.1■□□□□ 0.49
COL9A3-205ENST00000466192 UGT1A4P22310 534 aa18.1■□□□□ 0.49
COL9A3-205ENST00000466192 PIK3R1P27986 724 aa18.1■□□□□ 0.49
COL9A3-205ENST00000466192 UGT1A3P35503 534 aa18.1■□□□□ 0.49
COL9A3-205ENST00000466192 UGT1A5P35504 534 aa18.1■□□□□ 0.49
COL9A3-205ENST00000466192 HERVK_113P63132 956 aa18.1■□□□□ 0.49
COL9A3-205ENST00000466192 TSNQ15631 228 aaKnown RBP18.1■□□□□ 0.49
COL9A3-205ENST00000466192 DUSP6Q16828 381 aa18.1■□□□□ 0.49
COL9A3-205ENST00000466192 PFKFB4Q16877 469 aa18.1■□□□□ 0.49
COL9A3-205ENST00000466192 UNC50Q53HI1 259 aa18.1■□□□□ 0.49
COL9A3-205ENST00000466192 LRRC66Q68CR7 880 aa18.1■□□□□ 0.49
COL9A3-205ENST00000466192 NKAPQ8N5F7 415 aaKnown RBP18.1■□□□□ 0.49
COL9A3-205ENST00000466192 PTGR2Q8N8N7 351 aaPredicted RBP18.1■□□□□ 0.49
COL9A3-205ENST00000466192 ASIC4Q96FT7 647 aa18.1■□□□□ 0.49
COL9A3-205ENST00000466192 MCCC1Q96RQ3 725 aaPredicted RBP18.1■□□□□ 0.49
COL9A3-205ENST00000466192 CCDC28BQ9BUN5 200 aa18.1■□□□□ 0.49
COL9A3-205ENST00000466192 BOCQ9BWV1 1114 aa18.1■□□□□ 0.49
COL9A3-205ENST00000466192 ERVK-6Q9BXR3 956 aa18.1■□□□□ 0.49
COL9A3-205ENST00000466192 COMMD10Q9Y6G5 202 aa18.1■□□□□ 0.49
COL9A3-205ENST00000466192 A0A088AWK7 358 aa18.1■□□□□ 0.49
COL9A3-205ENST00000466192 TRBV5-4A0A0C4DH59 114 aa18.1■□□□□ 0.49
COL9A3-205ENST00000466192 TTC34A8MYJ7 566 aa18.1■□□□□ 0.49
COL9A3-205ENST00000466192 CDC7O00311 574 aa18.1■□□□□ 0.49
COL9A3-205ENST00000466192 SDHDO14521 159 aa18.1■□□□□ 0.49
COL9A3-205ENST00000466192 KERAO60938 352 aa18.1■□□□□ 0.49
COL9A3-205ENST00000466192 KRT36O76013 467 aa18.1■□□□□ 0.49
COL9A3-205ENST00000466192 SIX3O95343 332 aaPredicted RBP18.1■□□□□ 0.49
COL9A3-205ENST00000466192 LHCGRP22888 699 aa18.1■□□□□ 0.49
COL9A3-205ENST00000466192 PRDX6P30041 224 aa18.1■□□□□ 0.49
COL9A3-205ENST00000466192 PPARGP37231 505 aaPredicted RBP18.1■□□□□ 0.49
COL9A3-205ENST00000466192 SPAM1P38567 509 aa18.1■□□□□ 0.49
COL9A3-205ENST00000466192 ERFP50548 548 aa18.1■□□□□ 0.49
COL9A3-205ENST00000466192 CLCN7P51798 805 aa18.1■□□□□ 0.49
COL9A3-205ENST00000466192 CDH13P55290 713 aa18.1■□□□□ 0.49
COL9A3-205ENST00000466192 ATP6V0D1P61421 351 aa18.1■□□□□ 0.49
COL9A3-205ENST00000466192 BTKQ06187 659 aa18.1■□□□□ 0.49
COL9A3-205ENST00000466192 CHRNA6Q15825 494 aa18.1■□□□□ 0.49
COL9A3-205ENST00000466192 LRRC73Q5JTD7 316 aa18.1■□□□□ 0.49
COL9A3-205ENST00000466192 USP45Q70EL2 814 aa18.1■□□□□ 0.49
COL9A3-205ENST00000466192 CBARPQ8N350 705 aaPredicted RBP18.1■□□□□ 0.49
COL9A3-205ENST00000466192 GPR26Q8NDV2 337 aa18.1■□□□□ 0.49
COL9A3-205ENST00000466192 STAG3L4Q8TBR4 150 aa18.1■□□□□ 0.49
COL9A3-205ENST00000466192 FRS2Q8WU20 508 aa18.1■□□□□ 0.49
COL9A3-205ENST00000466192 EEF1AKMT1Q8WVE0 214 aa18.1■□□□□ 0.49
COL9A3-205ENST00000466192 OSCP1Q8WVF1 389 aa18.1■□□□□ 0.49
COL9A3-205ENST00000466192 SARS2Q9NP81 518 aaKnown RBP18.1■□□□□ 0.49
COL9A3-205ENST00000466192 WASH3PC4AMC7 463 aa18.09■□□□□ 0.49
COL9A3-205ENST00000466192 E5RI56 91 aa18.09■□□□□ 0.49
COL9A3-205ENST00000466192 CIB2O75838 187 aa18.09■□□□□ 0.49
COL9A3-205ENST00000466192 LMNAP02545 664 aaKnown RBP18.09■□□□□ 0.49
COL9A3-205ENST00000466192 CISD3P0C7P0 127 aa18.09■□□□□ 0.49
COL9A3-205ENST00000466192 ITGALP20701 1170 aa18.09■□□□□ 0.49
COL9A3-205ENST00000466192 PTSQ03393 145 aa18.09■□□□□ 0.49
COL9A3-205ENST00000466192 GALNT1Q10472 559 aaPredicted RBP18.09■□□□□ 0.49
COL9A3-205ENST00000466192 GRAMD4Q6IC98 578 aa18.09■□□□□ 0.49
COL9A3-205ENST00000466192 C12orf40Q86WS4 652 aa18.09■□□□□ 0.49
COL9A3-205ENST00000466192 CPNE9Q8IYJ1 553 aa18.09■□□□□ 0.49
COL9A3-205ENST00000466192 STMN2Q93045 179 aa18.09■□□□□ 0.49
COL9A3-205ENST00000466192 MAELQ96JY0 434 aaKnown RBP18.09■□□□□ 0.49
COL9A3-205ENST00000466192 KLHL32Q96NJ5 620 aa18.09■□□□□ 0.49
COL9A3-205ENST00000466192 BRD9Q9H8M2 597 aa18.09■□□□□ 0.49
COL9A3-205ENST00000466192 RNF112Q9ULX5 631 aa18.09■□□□□ 0.49
COL9A3-205ENST00000466192 PCDHB1Q9Y5F3 818 aa18.09■□□□□ 0.49
COL9A3-205ENST00000466192 NPEPPSL1A6NEC2 478 aa18.08■□□□□ 0.49
COL9A3-205ENST00000466192 LRRC14BA6NHZ5 514 aa18.08■□□□□ 0.49
COL9A3-205ENST00000466192 ADH5P11766 374 aa18.08■□□□□ 0.49
COL9A3-205ENST00000466192 GFAPP14136 432 aa18.08■□□□□ 0.49
COL9A3-205ENST00000466192 ARSAP15289 507 aa18.08■□□□□ 0.49
COL9A3-205ENST00000466192 GNAZP19086 355 aa18.08■□□□□ 0.49
COL9A3-205ENST00000466192 ITGAXP20702 1163 aa18.08■□□□□ 0.49
COL9A3-205ENST00000466192 MAGEA10P43363 369 aaPredicted RBP18.08■□□□□ 0.49
COL9A3-205ENST00000466192 RCN1Q15293 331 aa18.08■□□□□ 0.49
COL9A3-205ENST00000466192 FAM78AQ5JUQ0 283 aa18.08■□□□□ 0.49
COL9A3-205ENST00000466192 CLEC6AQ6EIG7 209 aa18.08■□□□□ 0.49
COL9A3-205ENST00000466192 GDPD4Q6W3E5 623 aa18.08■□□□□ 0.49
COL9A3-205ENST00000466192 RFLNAQ6ZTI6 216 aa18.08■□□□□ 0.49
COL9A3-205ENST00000466192 NPAS3Q8IXF0 933 aa18.08■□□□□ 0.49
COL9A3-205ENST00000466192 PLPP6Q8IY26 295 aa18.08■□□□□ 0.49
COL9A3-205ENST00000466192 DEFB107AQ8IZN7 70 aa18.08■□□□□ 0.49
COL9A3-205ENST00000466192 AFAP1L2Q8N4X5 818 aa18.08■□□□□ 0.49
COL9A3-205ENST00000466192 STON2Q8WXE9 905 aa18.08■□□□□ 0.49
COL9A3-205ENST00000466192 FUBP1Q96AE4 644 aaKnown RBP18.08■□□□□ 0.49
COL9A3-205ENST00000466192 LINGO1Q96FE5 620 aa18.08■□□□□ 0.49
COL9A3-205ENST00000466192 PANX3Q96QZ0 392 aa18.08■□□□□ 0.49
COL9A3-205ENST00000466192 TRMOQ9BU70 441 aa18.08■□□□□ 0.49
COL9A3-205ENST00000466192 ZNF385DQ9H6B1 395 aa18.08■□□□□ 0.49
COL9A3-205ENST00000466192 CCDC189A1A4V9 331 aa18.08■□□□□ 0.48
COL9A3-205ENST00000466192 GOLGA8CPA6NN73 597 aa18.08■□□□□ 0.48
COL9A3-205ENST00000466192 BTN3A1O00481 513 aa18.08■□□□□ 0.48
COL9A3-205ENST00000466192 ECI2O75521 394 aa18.08■□□□□ 0.48
COL9A3-205ENST00000466192 PAPLNO95428 1278 aa18.08■□□□□ 0.48
COL9A3-205ENST00000466192 ZNF7P17097 686 aaPredicted RBP18.08■□□□□ 0.48
COL9A3-205ENST00000466192 ACRV1P26436 265 aa18.08■□□□□ 0.48
COL9A3-205ENST00000466192 DGKGP49619 791 aa18.08■□□□□ 0.48
COL9A3-205ENST00000466192 IL2P60568 153 aa18.08■□□□□ 0.48
COL9A3-205ENST00000466192 KCNC3Q14003 757 aa18.08■□□□□ 0.48
COL9A3-205ENST00000466192 RIPOR1Q6ZS17 1223 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms