RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 ARMCX6Q7L4S7 300 aa11.03□□□□□ -0.64
VCP-204ENST00000466100 TAS2R42Q7RTR8 314 aa11.03□□□□□ -0.64
VCP-204ENST00000466100 OR13H1Q8NG92 308 aa11.03□□□□□ -0.64
VCP-204ENST00000466100 FAM174AQ8TBP5 190 aa11.03□□□□□ -0.64
VCP-204ENST00000466100 ANKRD7Q92527 254 aa11.03□□□□□ -0.64
VCP-204ENST00000466100 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.03□□□□□ -0.64
VCP-204ENST00000466100 P2RY12Q9H244 342 aa11.03□□□□□ -0.64
VCP-204ENST00000466100 ARFGAP3Q9NP61 516 aa11.03□□□□□ -0.64
VCP-204ENST00000466100 PPANQ9NQ55 473 aaKnown RBP11.03□□□□□ -0.64
VCP-204ENST00000466100 FBXO6Q9NRD1 293 aaPredicted RBP11.03□□□□□ -0.64
VCP-204ENST00000466100 PHPT1Q9NRX4 125 aaPredicted RBP11.03□□□□□ -0.64
VCP-204ENST00000466100 INTS10Q9NVR2 710 aaKnown RBP11.03□□□□□ -0.64
VCP-204ENST00000466100 ZDHHC3Q9NYG2 299 aa11.03□□□□□ -0.64
VCP-204ENST00000466100 VPS18Q9P253 973 aa11.03□□□□□ -0.64
VCP-204ENST00000466100 FETUBQ9UGM5 382 aa11.03□□□□□ -0.64
VCP-204ENST00000466100 NFS1Q9Y697 457 aa11.03□□□□□ -0.64
VCP-204ENST00000466100 ARHGEF17Q96PE2 2063 aaPredicted RBP11.03□□□□□ -0.64
VCP-204ENST00000466100 DMXL1Q9Y485 3027 aa11.02□□□□□ -0.65
VCP-204ENST00000466100 TMEM202A6NGA9 273 aa11.02□□□□□ -0.65
VCP-204ENST00000466100 OR1I1O60431 355 aa11.02□□□□□ -0.65
VCP-204ENST00000466100 MTX2O75431 263 aa11.02□□□□□ -0.65
VCP-204ENST00000466100 TCEA3O75764 348 aa11.02□□□□□ -0.65
VCP-204ENST00000466100 RHOBTB1O94844 696 aa11.02□□□□□ -0.65
VCP-204ENST00000466100 SLC25A14O95258 325 aaPredicted RBP11.02□□□□□ -0.65
VCP-204ENST00000466100 AHSGP02765 367 aa11.02□□□□□ -0.65
VCP-204ENST00000466100 CEACAM5P06731 702 aa11.02□□□□□ -0.65
VCP-204ENST00000466100 RPS3P23396 243 aaKnown RBP eCLIP11.02□□□□□ -0.652e-7■■■■□ 24.4
VCP-204ENST00000466100 RABIFP47224 123 aa11.02□□□□□ -0.65
VCP-204ENST00000466100 DHPSP49366 369 aaPredicted RBP11.02□□□□□ -0.65
VCP-204ENST00000466100 CSE1LP55060 971 aaKnown RBP11.02□□□□□ -0.65
VCP-204ENST00000466100 ADARP55265 1226 aaKnown RBP11.02□□□□□ -0.65
VCP-204ENST00000466100 PDE1CQ14123 709 aaPredicted RBP11.02□□□□□ -0.65
VCP-204ENST00000466100 SIM2Q14190 667 aaPredicted RBP11.02□□□□□ -0.65
VCP-204ENST00000466100 STAT4Q14765 748 aa11.02□□□□□ -0.65
VCP-204ENST00000466100 NFATC4Q14934 902 aa11.02□□□□□ -0.65
VCP-204ENST00000466100 KLHL38Q2WGJ6 581 aa11.02□□□□□ -0.65
VCP-204ENST00000466100 RNF187Q5TA31 235 aaPredicted RBP11.02□□□□□ -0.65
VCP-204ENST00000466100 KCTD16Q68DU8 428 aa11.02□□□□□ -0.65
VCP-204ENST00000466100 ZNF549Q6P9A3 640 aa11.02□□□□□ -0.65
VCP-204ENST00000466100 CNSTQ6PJW8 725 aa11.02□□□□□ -0.65
VCP-204ENST00000466100 MACC1Q6ZN28 852 aa11.02□□□□□ -0.65
VCP-204ENST00000466100 Q6ZSR6 202 aa11.02□□□□□ -0.65
VCP-204ENST00000466100 CEP68Q76N32 757 aa11.02□□□□□ -0.65
VCP-204ENST00000466100 ADGRG6Q86SQ4 1221 aa11.02□□□□□ -0.65
VCP-204ENST00000466100 SDCCAG8Q86SQ7 713 aaPredicted RBP11.02□□□□□ -0.65
VCP-204ENST00000466100 IQCHQ86VS3 1027 aa11.02□□□□□ -0.65
VCP-204ENST00000466100 LRRC6Q86X45 466 aa11.02□□□□□ -0.65
VCP-204ENST00000466100 RBFAQ8N0V3 343 aa11.02□□□□□ -0.65
VCP-204ENST00000466100 IQCKQ8N0W5 287 aa11.02□□□□□ -0.65
VCP-204ENST00000466100 OTUD6BQ8N6M0 293 aa11.02□□□□□ -0.65
VCP-204ENST00000466100 PPM1NQ8N819 430 aa11.02□□□□□ -0.65
VCP-204ENST00000466100 MFSD2AQ8NA29 543 aa11.02□□□□□ -0.65
VCP-204ENST00000466100 DCAKDQ8WVC6 231 aa11.02□□□□□ -0.65
VCP-204ENST00000466100 SLC44A1Q8WWI5 657 aa11.02□□□□□ -0.65
VCP-204ENST00000466100 CDKL2Q92772 493 aa11.02□□□□□ -0.65
VCP-204ENST00000466100 SCARF2Q96GP6 870 aaPredicted RBP11.02□□□□□ -0.65
VCP-204ENST00000466100 BIRC8Q96P09 236 aa11.02□□□□□ -0.65
VCP-204ENST00000466100 PAFAH2Q99487 392 aa11.02□□□□□ -0.65
VCP-204ENST00000466100 COPS8Q99627 209 aa11.02□□□□□ -0.65
VCP-204ENST00000466100 PRRX2Q99811 253 aa11.02□□□□□ -0.65
VCP-204ENST00000466100 CPNE1Q99829 537 aa11.02□□□□□ -0.65
VCP-204ENST00000466100 TRIM39Q9HCM9 518 aa11.02□□□□□ -0.65
VCP-204ENST00000466100 FGF22Q9HCT0 170 aa11.02□□□□□ -0.65
VCP-204ENST00000466100 ARGLU1Q9NWB6 273 aaPredicted RBP11.02□□□□□ -0.65
VCP-204ENST00000466100 NSMCE4AQ9NXX6 385 aa11.02□□□□□ -0.65
VCP-204ENST00000466100 EURLQ9NYK6 297 aa11.02□□□□□ -0.65
VCP-204ENST00000466100 PILRBQ9UKJ0 227 aa11.02□□□□□ -0.65
VCP-204ENST00000466100 PNMA8BQ9ULN7 279 aaPredicted RBP11.02□□□□□ -0.65
VCP-204ENST00000466100 SLC17A4Q9Y2C5 497 aa11.02□□□□□ -0.65
VCP-204ENST00000466100 PCYT1BQ9Y5K3 369 aaPredicted RBP11.02□□□□□ -0.65
VCP-204ENST00000466100 PRSS21Q9Y6M0 314 aa11.02□□□□□ -0.65
VCP-204ENST00000466100 R4GN57 208 aa11.02□□□□□ -0.65
VCP-204ENST00000466100 ATXN2Q99700 1313 aaKnown RBP11.02□□□□□ -0.65
VCP-204ENST00000466100 EXOC1LA0A1B0GW35 172 aa11.01□□□□□ -0.65
VCP-204ENST00000466100 HMX2A2RU54 273 aa11.01□□□□□ -0.65
VCP-204ENST00000466100 DLL1O00548 723 aa11.01□□□□□ -0.65
VCP-204ENST00000466100 PRMT5O14744 637 aaPredicted RBP11.01□□□□□ -0.65
VCP-204ENST00000466100 CHUKO15111 745 aa11.01□□□□□ -0.65
VCP-204ENST00000466100 BCAT2O15382 392 aaPredicted RBP11.01□□□□□ -0.65
VCP-204ENST00000466100 VEGFDO43915 354 aa11.01□□□□□ -0.65
VCP-204ENST00000466100 DNAJC6O75061 913 aa11.01□□□□□ -0.65
VCP-204ENST00000466100 NDUFS3O75489 264 aa11.01□□□□□ -0.65
VCP-204ENST00000466100 FAM155BO75949 473 aa11.01□□□□□ -0.65
VCP-204ENST00000466100 HAUS5O94927 633 aa11.01□□□□□ -0.65
VCP-204ENST00000466100 FUCA1P04066 466 aa11.01□□□□□ -0.65
VCP-204ENST00000466100 THEGLP0DJG4 465 aa11.01□□□□□ -0.65
VCP-204ENST00000466100 ZNF8P17098 575 aaPredicted RBP11.01□□□□□ -0.65
VCP-204ENST00000466100 CD38P28907 300 aa11.01□□□□□ -0.65
VCP-204ENST00000466100 PMLP29590 882 aa11.01□□□□□ -0.65
VCP-204ENST00000466100 HOXD12P35452 270 aa11.01□□□□□ -0.65
VCP-204ENST00000466100 GP5P40197 560 aa11.01□□□□□ -0.65
VCP-204ENST00000466100 NSG1P42857 185 aa11.01□□□□□ -0.65
VCP-204ENST00000466100 ABCG1P45844 678 aa11.01□□□□□ -0.65
VCP-204ENST00000466100 CD151P48509 253 aa11.01□□□□□ -0.65
VCP-204ENST00000466100 CTSCP53634 463 aa11.01□□□□□ -0.65
VCP-204ENST00000466100 OVGP1Q12889 678 aa11.01□□□□□ -0.65
VCP-204ENST00000466100 TMEM115Q12893 351 aaPredicted RBP11.01□□□□□ -0.65
VCP-204ENST00000466100 FZD2Q14332 565 aa11.01□□□□□ -0.65
VCP-204ENST00000466100 CTSL3PQ5NE16 218 aa11.01□□□□□ -0.65
VCP-204ENST00000466100 LAYNQ6UX15 382 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms