RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 ZCCHC7Q8N3Z6 543 aaKnown RBP19.6■□□□□ 0.73
SDF4-205ENST00000465727 ITFG1Q8TB96 612 aa19.6■□□□□ 0.73
SDF4-205ENST00000465727 ZFP90Q8TF47 636 aa19.6■□□□□ 0.73
SDF4-205ENST00000465727 TMEM74Q96NL1 305 aa19.6■□□□□ 0.73
SDF4-205ENST00000465727 RGS18Q9NS28 235 aa19.6■□□□□ 0.73
SDF4-205ENST00000465727 DNAJC25-GNG10A0A024R161 153 aa19.59■□□□□ 0.73
SDF4-205ENST00000465727 FAM234BA2RU67 622 aa19.59■□□□□ 0.73
SDF4-205ENST00000465727 FGF10O15520 208 aaPredicted RBP19.59■□□□□ 0.73
SDF4-205ENST00000465727 S1PR4O95977 384 aa19.59■□□□□ 0.73
SDF4-205ENST00000465727 ANXA6P08133 673 aa19.59■□□□□ 0.73
SDF4-205ENST00000465727 GRIK1P39086 918 aa19.59■□□□□ 0.73
SDF4-205ENST00000465727 SERPINH1P50454 418 aaKnown RBP19.59■□□□□ 0.73
SDF4-205ENST00000465727 GP2P55259 537 aaKnown RBP19.59■□□□□ 0.73
SDF4-205ENST00000465727 ECT2LQ008S8 904 aa19.59■□□□□ 0.73
SDF4-205ENST00000465727 IFITM3Q01628 133 aa19.59■□□□□ 0.73
SDF4-205ENST00000465727 ARHGAP1Q07960 439 aa19.59■□□□□ 0.73
SDF4-205ENST00000465727 PCBP1Q15365 356 aaKnown RBP eCLIP19.59■□□□□ 0.734e-7■■■■□ 19.5
SDF4-205ENST00000465727 INAQ16352 499 aa19.59■□□□□ 0.73
SDF4-205ENST00000465727 APOBEC3FQ8IUX4 373 aaKnown RBP19.59■□□□□ 0.73
SDF4-205ENST00000465727 DPP10Q8N608 796 aa19.59■□□□□ 0.73
SDF4-205ENST00000465727 OR52K2Q8NGK3 314 aa19.59■□□□□ 0.73
SDF4-205ENST00000465727 OR13J1Q8NGT2 312 aa19.59■□□□□ 0.73
SDF4-205ENST00000465727 TRIB2Q92519 343 aa19.59■□□□□ 0.73
SDF4-205ENST00000465727 OSBPL10Q9BXB5 764 aa19.59■□□□□ 0.73
SDF4-205ENST00000465727 CPNE5Q9HCH3 593 aa19.59■□□□□ 0.73
SDF4-205ENST00000465727 RBM22Q9NW64 420 aaKnown RBP eCLIP19.59■□□□□ 0.735e-6■■■■■ 31.7
SDF4-205ENST00000465727 NEU3Q9UQ49 428 aa19.59■□□□□ 0.73
SDF4-205ENST00000465727 V9GYQ6 96 aa19.59■□□□□ 0.73
SDF4-205ENST00000465727 M0R3G1 203 aa19.58■□□□□ 0.73
SDF4-205ENST00000465727 PPP6CO00743 305 aa19.58■□□□□ 0.73
SDF4-205ENST00000465727 GABRDO14764 452 aa19.58■□□□□ 0.73
SDF4-205ENST00000465727 SIX3O95343 332 aaPredicted RBP19.58■□□□□ 0.73
SDF4-205ENST00000465727 CCDC159P0C7I6 412 aa19.58■□□□□ 0.73
SDF4-205ENST00000465727 KCNE1P15382 129 aa19.58■□□□□ 0.73
SDF4-205ENST00000465727 MTHFRP42898 656 aa19.58■□□□□ 0.73
SDF4-205ENST00000465727 WNT3AP56704 352 aa19.58■□□□□ 0.73
SDF4-205ENST00000465727 OR4D2P58180 307 aa19.58■□□□□ 0.73
SDF4-205ENST00000465727 LILRA4P59901 499 aa19.58■□□□□ 0.73
SDF4-205ENST00000465727 CDC20Q12834 499 aa19.58■□□□□ 0.73
SDF4-205ENST00000465727 PFKFB4Q16877 469 aa19.58■□□□□ 0.73
SDF4-205ENST00000465727 IMPG1Q17R60 797 aa19.58■□□□□ 0.73
SDF4-205ENST00000465727 THOC7Q6I9Y2 204 aaKnown RBP19.58■□□□□ 0.73
SDF4-205ENST00000465727 LRRC49Q8IUZ0 686 aa19.58■□□□□ 0.73
SDF4-205ENST00000465727 PHF10Q8WUB8 498 aaKnown RBP19.58■□□□□ 0.73
SDF4-205ENST00000465727 EXT2Q93063 718 aa19.58■□□□□ 0.73
SDF4-205ENST00000465727 ZNF566Q969W8 418 aa19.58■□□□□ 0.73
SDF4-205ENST00000465727 KCNA7Q96RP8 456 aa19.58■□□□□ 0.73
SDF4-205ENST00000465727 RBM4BQ9BQ04 359 aaKnown RBP19.58■□□□□ 0.73
SDF4-205ENST00000465727 HERC2P3Q9BVR0 1158 aa19.58■□□□□ 0.73
SDF4-205ENST00000465727 RBM4Q9BWF3 364 aaKnown RBP19.58■□□□□ 0.73
SDF4-205ENST00000465727 UGT2B28Q9BY64 529 aa19.58■□□□□ 0.73
SDF4-205ENST00000465727 ATXN3LQ9H3M9 355 aa19.58■□□□□ 0.73
SDF4-205ENST00000465727 NXF3Q9H4D5 531 aaKnown RBP19.58■□□□□ 0.73
SDF4-205ENST00000465727 TFB2MQ9H5Q4 396 aaKnown RBP19.58■□□□□ 0.73
SDF4-205ENST00000465727 ATP13A1Q9HD20 1204 aa19.58■□□□□ 0.73
SDF4-205ENST00000465727 THG1LQ9NWX6 298 aaKnown RBP19.58■□□□□ 0.73
SDF4-205ENST00000465727 DNAJB9Q9UBS3 223 aa19.58■□□□□ 0.73
SDF4-205ENST00000465727 BTRCQ9Y297 605 aa19.58■□□□□ 0.73
SDF4-205ENST00000465727 SLC1A7O00341 560 aa19.58■□□□□ 0.72
SDF4-205ENST00000465727 CRCPO75575 148 aa19.58■□□□□ 0.72
SDF4-205ENST00000465727 USP17L7P0C7H9 530 aa19.58■□□□□ 0.72
SDF4-205ENST00000465727 MTHFD2P13995 350 aa19.58■□□□□ 0.72
SDF4-205ENST00000465727 SUOXP51687 545 aa19.58■□□□□ 0.72
SDF4-205ENST00000465727 PPP2R2BQ00005 443 aa19.58■□□□□ 0.72
SDF4-205ENST00000465727 CLCQ05315 142 aa19.58■□□□□ 0.72
SDF4-205ENST00000465727 IL18R1Q13478 541 aa19.58■□□□□ 0.72
SDF4-205ENST00000465727 MEP1AQ16819 746 aa19.58■□□□□ 0.72
SDF4-205ENST00000465727 KDELC1Q6UW63 502 aa19.58■□□□□ 0.72
SDF4-205ENST00000465727 SGCDQ92629 289 aa19.58■□□□□ 0.72
SDF4-205ENST00000465727 TEX37Q96LM6 180 aa19.58■□□□□ 0.72
SDF4-205ENST00000465727 MBOAT4Q96T53 435 aa19.58■□□□□ 0.72
SDF4-205ENST00000465727 CATSPERBQ9H7T0 1116 aa19.58■□□□□ 0.72
SDF4-205ENST00000465727 SP140LQ9H930 580 aa19.58■□□□□ 0.72
SDF4-205ENST00000465727 INTS7Q9NVH2 962 aaKnown RBP19.58■□□□□ 0.72
SDF4-205ENST00000465727 KLHL3Q9UH77 587 aa19.58■□□□□ 0.72
SDF4-205ENST00000465727 TMEM98Q9Y2Y6 226 aa19.58■□□□□ 0.72
SDF4-205ENST00000465727 COL4A4P53420 1690 aaPredicted RBP19.57■□□□□ 0.72
SDF4-205ENST00000465727 KPNA6O60684 536 aa19.57■□□□□ 0.72
SDF4-205ENST00000465727 XYLBO75191 536 aa19.57■□□□□ 0.72
SDF4-205ENST00000465727 GMNNO75496 209 aa19.57■□□□□ 0.72
SDF4-205ENST00000465727 SOAT2O75908 522 aa19.57■□□□□ 0.72
SDF4-205ENST00000465727 MYO1DO94832 1006 aa19.57■□□□□ 0.72
SDF4-205ENST00000465727 CHEK2O96017 543 aa19.57■□□□□ 0.72
SDF4-205ENST00000465727 HOXC13P31276 330 aa19.57■□□□□ 0.72
SDF4-205ENST00000465727 CD47Q08722 323 aa19.57■□□□□ 0.72
SDF4-205ENST00000465727 XKR7Q5GH72 579 aa19.57■□□□□ 0.72
SDF4-205ENST00000465727 KIAA0319Q5VV43 1072 aa19.57■□□□□ 0.72
SDF4-205ENST00000465727 PIM3Q86V86 326 aa19.57■□□□□ 0.72
SDF4-205ENST00000465727 LACC1Q8IV20 430 aa19.57■□□□□ 0.72
SDF4-205ENST00000465727 OR6Q1Q8NGQ2 317 aa19.57■□□□□ 0.72
SDF4-205ENST00000465727 ATOH8Q96SQ7 321 aa19.57■□□□□ 0.72
SDF4-205ENST00000465727 ANKHQ9HCJ1 492 aa19.57■□□□□ 0.72
SDF4-205ENST00000465727 SACM1LQ9NTJ5 587 aa19.57■□□□□ 0.72
SDF4-205ENST00000465727 CHRNA1P02708 482 aa19.56■□□□□ 0.72
SDF4-205ENST00000465727 ERVK-8P63133 956 aa19.56■□□□□ 0.72
SDF4-205ENST00000465727 HIST2H2ACQ16777 129 aaPredicted RBP19.56■□□□□ 0.72
SDF4-205ENST00000465727 CTU2Q2VPK5 515 aaKnown RBP19.56■□□□□ 0.72
SDF4-205ENST00000465727 INAVAQ3KP66 663 aa19.56■□□□□ 0.72
SDF4-205ENST00000465727 XKR4Q5GH76 650 aa19.56■□□□□ 0.72
SDF4-205ENST00000465727 SULT1C3Q6IMI6 304 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms