RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 APTXQ7Z2E3 356 aaKnown RBP11.61□□□□□ -0.55
CNOT4-208ENST00000465721 PRSS42Q7Z5A4 293 aa11.61□□□□□ -0.55
CNOT4-208ENST00000465721 PHYKPLQ8IUZ5 450 aa11.61□□□□□ -0.55
CNOT4-208ENST00000465721 RASGRP3Q8IV61 690 aa11.61□□□□□ -0.55
CNOT4-208ENST00000465721 NDUFAF2Q8N183 169 aa11.61□□□□□ -0.55
CNOT4-208ENST00000465721 CPT1CQ8TCG5 803 aa11.61□□□□□ -0.55
CNOT4-208ENST00000465721 NSMCE1Q8WV22 266 aa11.61□□□□□ -0.55
CNOT4-208ENST00000465721 RSC1A1Q92681 617 aa11.61□□□□□ -0.55
CNOT4-208ENST00000465721 TGM7Q96PF1 710 aa11.61□□□□□ -0.55
CNOT4-208ENST00000465721 LYSMD1Q96S90 227 aa11.61□□□□□ -0.55
CNOT4-208ENST00000465721 POLR1EQ9GZS1 481 aaKnown RBP11.61□□□□□ -0.55
CNOT4-208ENST00000465721 TWSG1Q9GZX9 223 aa11.61□□□□□ -0.55
CNOT4-208ENST00000465721 PCDH18Q9HCL0 1135 aa11.61□□□□□ -0.55
CNOT4-208ENST00000465721 LIMA1Q9UHB6 759 aaKnown RBP11.61□□□□□ -0.55
CNOT4-208ENST00000465721 LNPEPQ9UIQ6 1025 aa11.61□□□□□ -0.55
CNOT4-208ENST00000465721 VPS4AQ9UN37 437 aa11.61□□□□□ -0.55
CNOT4-208ENST00000465721 CHKBQ9Y259 395 aa11.61□□□□□ -0.55
CNOT4-208ENST00000465721 CNTRLQ7Z7A1 2325 aa11.61□□□□□ -0.55
CNOT4-208ENST00000465721 OTOGQ6ZRI0 2925 aa11.61□□□□□ -0.55
CNOT4-208ENST00000465721 NUP210LQ5VU65 1888 aa11.61□□□□□ -0.55
CNOT4-208ENST00000465721 C2CD3Q4AC94 2353 aa11.61□□□□□ -0.55
CNOT4-208ENST00000465721 PCSK5Q92824 1860 aa11.6□□□□□ -0.55
CNOT4-208ENST00000465721 AKAP9Q99996 3911 aa11.6□□□□□ -0.55
CNOT4-208ENST00000465721 TTLL8A6PVC2 850 aa11.6□□□□□ -0.55
CNOT4-208ENST00000465721 GRID2O43424 1007 aa11.6□□□□□ -0.55
CNOT4-208ENST00000465721 KIF1CO43896 1103 aaKnown RBP11.6□□□□□ -0.55
CNOT4-208ENST00000465721 MFSD11O43934 449 aa11.6□□□□□ -0.55
CNOT4-208ENST00000465721 UBXN7O94888 489 aa11.6□□□□□ -0.55
CNOT4-208ENST00000465721 ZNF8P17098 575 aaPredicted RBP11.6□□□□□ -0.55
CNOT4-208ENST00000465721 SERPINB6P35237 376 aa11.6□□□□□ -0.55
CNOT4-208ENST00000465721 SLC19A1P41440 591 aa11.6□□□□□ -0.55
CNOT4-208ENST00000465721 CAPZBP47756 277 aa11.6□□□□□ -0.55
CNOT4-208ENST00000465721 SPINT3P49223 89 aa11.6□□□□□ -0.55
CNOT4-208ENST00000465721 UBXN1Q04323 297 aa11.6□□□□□ -0.55
CNOT4-208ENST00000465721 LAMB3Q13751 1172 aa11.6□□□□□ -0.55
CNOT4-208ENST00000465721 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.6□□□□□ -0.55
CNOT4-208ENST00000465721 CPZQ66K79 652 aa11.6□□□□□ -0.55
CNOT4-208ENST00000465721 TXNRD3NBQ6F5E7 133 aa11.6□□□□□ -0.55
CNOT4-208ENST00000465721 AOPEPQ8N6M6 819 aa11.6□□□□□ -0.55
CNOT4-208ENST00000465721 MAML1Q92585 1016 aa11.6□□□□□ -0.55
CNOT4-208ENST00000465721 HSPH1Q92598 858 aa11.6□□□□□ -0.55
CNOT4-208ENST00000465721 ELMO2Q96JJ3 720 aa11.6□□□□□ -0.55
CNOT4-208ENST00000465721 RUFY1Q96T51 708 aa11.6□□□□□ -0.55
CNOT4-208ENST00000465721 CARD9Q9H257 536 aa11.6□□□□□ -0.55
CNOT4-208ENST00000465721 ACTL8Q9H568 366 aa11.6□□□□□ -0.55
CNOT4-208ENST00000465721 ZNF624Q9P2J8 865 aaPredicted RBP11.6□□□□□ -0.55
CNOT4-208ENST00000465721 ATXN10Q9UBB4 475 aa11.6□□□□□ -0.55
CNOT4-208ENST00000465721 MAP4K5Q9Y4K4 846 aa11.6□□□□□ -0.55
CNOT4-208ENST00000465721 ZGRF1Q86YA3 2104 aa11.6□□□□□ -0.55
CNOT4-208ENST00000465721 DOCK10Q96BY6 2186 aa11.6□□□□□ -0.55
CNOT4-208ENST00000465721 SNRNP200O75643 2136 aaKnown RBP11.59□□□□□ -0.55
CNOT4-208ENST00000465721 POLQO75417 2590 aa11.59□□□□□ -0.55
CNOT4-208ENST00000465721 C1orf232A0A0U1RR37 186 aa11.59□□□□□ -0.55
CNOT4-208ENST00000465721 PIPSLA2A3N6 862 aa11.59□□□□□ -0.55
CNOT4-208ENST00000465721 C21orf140B9A014 251 aa11.59□□□□□ -0.55
CNOT4-208ENST00000465721 SPAG6O75602 509 aa11.59□□□□□ -0.55
CNOT4-208ENST00000465721 CCDC172P0C7W6 258 aa11.59□□□□□ -0.55
CNOT4-208ENST00000465721 RARAP10276 462 aa11.59□□□□□ -0.55
CNOT4-208ENST00000465721 XRCC1P18887 633 aaPredicted RBP11.59□□□□□ -0.55
CNOT4-208ENST00000465721 CASP14P31944 242 aa11.59□□□□□ -0.55
CNOT4-208ENST00000465721 NADK2Q4G0N4 442 aa11.59□□□□□ -0.55
CNOT4-208ENST00000465721 ZNF648Q5T619 568 aaPredicted RBP11.59□□□□□ -0.55
CNOT4-208ENST00000465721 E4F1Q66K89 784 aaPredicted RBP11.59□□□□□ -0.55
CNOT4-208ENST00000465721 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.59□□□□□ -0.55
CNOT4-208ENST00000465721 LPCAT1Q8NF37 534 aa11.59□□□□□ -0.55
CNOT4-208ENST00000465721 ARRDC2Q8TBH0 407 aa11.59□□□□□ -0.55
CNOT4-208ENST00000465721 KLHL6Q8WZ60 621 aa11.59□□□□□ -0.55
CNOT4-208ENST00000465721 ZNF653Q96CK0 615 aa11.59□□□□□ -0.55
CNOT4-208ENST00000465721 OSGEPL1Q9H4B0 414 aa11.59□□□□□ -0.55
CNOT4-208ENST00000465721 FAM83DQ9H4H8 585 aa11.59□□□□□ -0.55
CNOT4-208ENST00000465721 ARFGAP3Q9NP61 516 aa11.59□□□□□ -0.55
CNOT4-208ENST00000465721 MLXIPLQ9NP71 852 aa11.59□□□□□ -0.55
CNOT4-208ENST00000465721 LHX9Q9NQ69 397 aa11.59□□□□□ -0.55
CNOT4-208ENST00000465721 KLC4Q9NSK0 619 aa11.59□□□□□ -0.55
CNOT4-208ENST00000465721 CUEDC1Q9NWM3 386 aaPredicted RBP11.59□□□□□ -0.55
CNOT4-208ENST00000465721 DTLQ9NZJ0 730 aa11.59□□□□□ -0.55
CNOT4-208ENST00000465721 SLC23A2Q9UGH3 650 aa11.59□□□□□ -0.55
CNOT4-208ENST00000465721 PCDHGA9Q9Y5G4 932 aaKnown RBP11.59□□□□□ -0.55
CNOT4-208ENST00000465721 SCINQ9Y6U3 715 aa11.59□□□□□ -0.55
CNOT4-208ENST00000465721 CELSR1Q9NYQ6 3014 aa11.59□□□□□ -0.55
CNOT4-208ENST00000465721 A1L4Q6 167 aa11.58□□□□□ -0.56
CNOT4-208ENST00000465721 LRRC10BA6NIK2 292 aa11.58□□□□□ -0.56
CNOT4-208ENST00000465721 CHUKO15111 745 aa11.58□□□□□ -0.56
CNOT4-208ENST00000465721 RASSF9O75901 435 aa11.58□□□□□ -0.56
CNOT4-208ENST00000465721 MTA2O94776 668 aa11.58□□□□□ -0.56
CNOT4-208ENST00000465721 VIPP01282 170 aa11.58□□□□□ -0.56
CNOT4-208ENST00000465721 FTLP02792 175 aaPredicted RBP11.58□□□□□ -0.56
CNOT4-208ENST00000465721 HLA-DQB2P05538 268 aa11.58□□□□□ -0.56
CNOT4-208ENST00000465721 BRAFP15056 766 aa11.58□□□□□ -0.56
CNOT4-208ENST00000465721 PGDP52209 483 aa11.58□□□□□ -0.56
CNOT4-208ENST00000465721 RPL26P61254 145 aaKnown RBP11.58□□□□□ -0.56
CNOT4-208ENST00000465721 RPS18P62269 152 aaKnown RBP11.58□□□□□ -0.56
CNOT4-208ENST00000465721 SLC25A11Q02978 314 aaKnown RBP11.58□□□□□ -0.56
CNOT4-208ENST00000465721 ITKQ08881 620 aa11.58□□□□□ -0.56
CNOT4-208ENST00000465721 NIPAL4Q0D2K0 466 aa11.58□□□□□ -0.56
CNOT4-208ENST00000465721 GALNT2Q10471 571 aa11.58□□□□□ -0.56
CNOT4-208ENST00000465721 CHAF1BQ13112 559 aa11.58□□□□□ -0.56
CNOT4-208ENST00000465721 IL10RAQ13651 578 aa11.58□□□□□ -0.56
CNOT4-208ENST00000465721 QPCTQ16769 361 aa11.58□□□□□ -0.56
CNOT4-208ENST00000465721 UGT8Q16880 541 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms