RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 PLEKHG4BQ96PX9 1271 aa21.52■■□□□ 1.04
LIME1-203ENST00000465591 SRPK1Q96SB4 655 aaKnown RBP21.52■■□□□ 1.04
LIME1-203ENST00000465591 FICDQ9BVA6 458 aa21.52■■□□□ 1.04
LIME1-203ENST00000465591 IL26Q9NPH9 171 aa21.52■■□□□ 1.04
LIME1-203ENST00000465591 IL17CQ9P0M4 197 aa21.52■■□□□ 1.04
LIME1-203ENST00000465591 LOXL2Q9Y4K0 774 aa21.52■■□□□ 1.04
LIME1-203ENST00000465591 CAPN6Q9Y6Q1 641 aa21.52■■□□□ 1.04
LIME1-203ENST00000465591 MGAQ8IWI9 3026 aa21.52■■□□□ 1.04
LIME1-203ENST00000465591 IGHV1OR21-1A0A087WYE8 117 aa21.51■■□□□ 1.03
LIME1-203ENST00000465591 TMX2-CTNND1H3BSU7 103 aa21.51■■□□□ 1.03
LIME1-203ENST00000465591 CHUKO15111 745 aa21.51■■□□□ 1.03
LIME1-203ENST00000465591 KCNN4O15554 427 aa21.51■■□□□ 1.03
LIME1-203ENST00000465591 HLA-DPA1P20036 260 aa21.51■■□□□ 1.03
LIME1-203ENST00000465591 PSMB4P28070 264 aa21.51■■□□□ 1.03
LIME1-203ENST00000465591 GPR3P46089 330 aa21.51■■□□□ 1.03
LIME1-203ENST00000465591 EIF3IQ13347 325 aaKnown RBP21.51■■□□□ 1.03
LIME1-203ENST00000465591 BIRC2Q13490 618 aa21.51■■□□□ 1.03
LIME1-203ENST00000465591 PLA2G4EQ3MJ16 856 aa21.51■■□□□ 1.03
LIME1-203ENST00000465591 PHF19Q5T6S3 580 aa21.51■■□□□ 1.03
LIME1-203ENST00000465591 DARS2Q6PI48 645 aaKnown RBP21.51■■□□□ 1.03
LIME1-203ENST00000465591 PIM3Q86V86 326 aa21.51■■□□□ 1.03
LIME1-203ENST00000465591 PHYKPLQ8IUZ5 450 aa21.51■■□□□ 1.03
LIME1-203ENST00000465591 ZNF547Q8IVP9 402 aa21.51■■□□□ 1.03
LIME1-203ENST00000465591 CCDC110Q8TBZ0 833 aa21.51■■□□□ 1.03
LIME1-203ENST00000465591 KCNE4Q8WWG9 221 aa21.51■■□□□ 1.03
LIME1-203ENST00000465591 APOL2Q9BQE5 337 aa21.51■■□□□ 1.03
LIME1-203ENST00000465591 TRABDQ9H4I3 376 aa21.51■■□□□ 1.03
LIME1-203ENST00000465591 TMEM9Q9P0T7 183 aa21.51■■□□□ 1.03
LIME1-203ENST00000465591 PISDQ9UG56 409 aa21.51■■□□□ 1.03
LIME1-203ENST00000465591 IGHV5-10-1A0A0J9YXX1 117 aa21.5■■□□□ 1.03
LIME1-203ENST00000465591 GAPDHSO14556 408 aaPredicted RBP21.5■■□□□ 1.03
LIME1-203ENST00000465591 SNX2O60749 519 aa21.5■■□□□ 1.03
LIME1-203ENST00000465591 TJP3O95049 919 aa21.5■■□□□ 1.03
LIME1-203ENST00000465591 ADRA1AP35348 466 aa21.5■■□□□ 1.03
LIME1-203ENST00000465591 MLLT3P42568 568 aaPredicted RBP21.5■■□□□ 1.03
LIME1-203ENST00000465591 SOWAHCQ53LP3 525 aaPredicted RBP21.5■■□□□ 1.03
LIME1-203ENST00000465591 IYDQ6PHW0 289 aa21.5■■□□□ 1.03
LIME1-203ENST00000465591 GLT6D1Q7Z4J2 308 aa21.5■■□□□ 1.03
LIME1-203ENST00000465591 RCBTB1Q8NDN9 531 aa21.5■■□□□ 1.03
LIME1-203ENST00000465591 VPS35Q96QK1 796 aa21.5■■□□□ 1.03
LIME1-203ENST00000465591 FSD1LQ9BXM9 530 aa21.5■■□□□ 1.03
LIME1-203ENST00000465591 PRDM8Q9NQV8 689 aa21.5■■□□□ 1.03
LIME1-203ENST00000465591 KLC4Q9NSK0 619 aa21.5■■□□□ 1.03
LIME1-203ENST00000465591 TCRBV7S2A1N4TA0A589 114 aa21.49■■□□□ 1.03
LIME1-203ENST00000465591 PRR19A6NJB7 356 aa21.49■■□□□ 1.03
LIME1-203ENST00000465591 KLK10O43240 276 aa21.49■■□□□ 1.03
LIME1-203ENST00000465591 UGT1A9O60656 530 aa21.49■■□□□ 1.03
LIME1-203ENST00000465591 UGT1A6P19224 532 aa21.49■■□□□ 1.03
LIME1-203ENST00000465591 UGT1A1P22309 533 aa21.49■■□□□ 1.03
LIME1-203ENST00000465591 UGT1A4P22310 534 aa21.49■■□□□ 1.03
LIME1-203ENST00000465591 SLC5A2P31639 672 aa21.49■■□□□ 1.03
LIME1-203ENST00000465591 UGT1A3P35503 534 aa21.49■■□□□ 1.03
LIME1-203ENST00000465591 GEMP55040 296 aa21.49■■□□□ 1.03
LIME1-203ENST00000465591 CHRNA6Q15825 494 aa21.49■■□□□ 1.03
LIME1-203ENST00000465591 ITPRIPL1Q6GPH6 555 aa21.49■■□□□ 1.03
LIME1-203ENST00000465591 FAM151BQ6UXP7 276 aa21.49■■□□□ 1.03
LIME1-203ENST00000465591 RANBP10Q6VN20 620 aa21.49■■□□□ 1.03
LIME1-203ENST00000465591 SPATA13Q96N96 652 aa21.49■■□□□ 1.03
LIME1-203ENST00000465591 FCRL3Q96P31 734 aaPredicted RBP21.49■■□□□ 1.03
LIME1-203ENST00000465591 UGT1A7Q9HAW7 530 aa21.49■■□□□ 1.03
LIME1-203ENST00000465591 UGT1A10Q9HAW8 530 aa21.49■■□□□ 1.03
LIME1-203ENST00000465591 UGT1A8Q9HAW9 530 aa21.49■■□□□ 1.03
LIME1-203ENST00000465591 KCNK4Q9NYG8 393 aa21.49■■□□□ 1.03
LIME1-203ENST00000465591 HACD3Q9P035 362 aa21.49■■□□□ 1.03
LIME1-203ENST00000465591 SCHIP1Q9P0W5 487 aaPredicted RBP21.49■■□□□ 1.03
LIME1-203ENST00000465591 R3HDM2Q9Y2K5 976 aaKnown RBP21.49■■□□□ 1.03
LIME1-203ENST00000465591 ANXA9O76027 345 aa21.48■■□□□ 1.03
LIME1-203ENST00000465591 JMJD7P0C870 316 aa21.48■■□□□ 1.03
LIME1-203ENST00000465591 F3P13726 295 aa21.48■■□□□ 1.03
LIME1-203ENST00000465591 MPSTP25325 297 aa21.48■■□□□ 1.03
LIME1-203ENST00000465591 SPAM1P38567 509 aa21.48■■□□□ 1.03
LIME1-203ENST00000465591 CETN2P41208 172 aa21.48■■□□□ 1.03
LIME1-203ENST00000465591 CLCNKAP51800 687 aa21.48■■□□□ 1.03
LIME1-203ENST00000465591 HHEXQ03014 270 aa21.48■■□□□ 1.03
LIME1-203ENST00000465591 KLF1Q13351 362 aaPredicted RBP21.48■■□□□ 1.03
LIME1-203ENST00000465591 MSLNQ13421 630 aaPredicted RBP21.48■■□□□ 1.03
LIME1-203ENST00000465591 NFATC2Q13469 925 aa21.48■■□□□ 1.03
LIME1-203ENST00000465591 SQSTM1Q13501 440 aa21.48■■□□□ 1.03
LIME1-203ENST00000465591 C11orf96Q7Z7L8 435 aa21.48■■□□□ 1.03
LIME1-203ENST00000465591 JAMLQ86YT9 394 aa21.48■■□□□ 1.03
LIME1-203ENST00000465591 SYCE1Q8N0S2 351 aa21.48■■□□□ 1.03
LIME1-203ENST00000465591 HES6Q96HZ4 224 aa21.48■■□□□ 1.03
LIME1-203ENST00000465591 CCDC74BQ96LY2 380 aa21.48■■□□□ 1.03
LIME1-203ENST00000465591 CPNE5Q9HCH3 593 aa21.48■■□□□ 1.03
LIME1-203ENST00000465591 SARS2Q9NP81 518 aaKnown RBP21.48■■□□□ 1.03
LIME1-203ENST00000465591 SSUH2Q9Y2M2 353 aa21.48■■□□□ 1.03
LIME1-203ENST00000465591 KCTD3Q9Y597 815 aa21.48■■□□□ 1.03
LIME1-203ENST00000465591 PCDHGA7Q9Y5G6 932 aa21.48■■□□□ 1.03
LIME1-203ENST00000465591 ARL5AQ9Y689 179 aa21.48■■□□□ 1.03
LIME1-203ENST00000465591 MIF4GDA9UHW6 222 aaKnown RBP21.47■■□□□ 1.03
LIME1-203ENST00000465591 GPR89AB7ZAQ6 455 aa21.47■■□□□ 1.03
LIME1-203ENST00000465591 VEGFDO43915 354 aa21.47■■□□□ 1.03
LIME1-203ENST00000465591 CDK14O94921 469 aa21.47■■□□□ 1.03
LIME1-203ENST00000465591 GPR89BP0CG08 455 aa21.47■■□□□ 1.03
LIME1-203ENST00000465591 CCL4P13236 92 aa21.47■■□□□ 1.03
LIME1-203ENST00000465591 ZNF7P17097 686 aaPredicted RBP21.47■■□□□ 1.03
LIME1-203ENST00000465591 TNNT3P45378 269 aaPredicted RBP21.47■■□□□ 1.03
LIME1-203ENST00000465591 LIMK2P53671 638 aa21.47■■□□□ 1.03
LIME1-203ENST00000465591 CLN3Q13286 438 aa21.47■■□□□ 1.03
LIME1-203ENST00000465591 CLPPQ16740 277 aaPredicted RBP21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms