RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 ABCB8Q9NUT2 735 aa13.79□□□□□ -0.2
HDAC6-215ENST00000465457 UBP1Q9NZI7 540 aa13.79□□□□□ -0.2
HDAC6-215ENST00000465457 MID1O15344 667 aa13.78□□□□□ -0.2
HDAC6-215ENST00000465457 SIGLEC6O43699 453 aa13.78□□□□□ -0.2
HDAC6-215ENST00000465457 SPAG7O75391 227 aa13.78□□□□□ -0.2
HDAC6-215ENST00000465457 LUC7L3O95232 432 aaKnown RBP13.78□□□□□ -0.2
HDAC6-215ENST00000465457 VIMP08670 466 aaKnown RBP13.78□□□□□ -0.2
HDAC6-215ENST00000465457 DRD4P21917 467 aa13.78□□□□□ -0.2
HDAC6-215ENST00000465457 ACP1P24666 158 aa13.78□□□□□ -0.2
HDAC6-215ENST00000465457 RPA3P35244 121 aaPredicted RBP13.78□□□□□ -0.2
HDAC6-215ENST00000465457 CD86P42081 329 aa13.78□□□□□ -0.2
HDAC6-215ENST00000465457 SERPINB8P50452 374 aa13.78□□□□□ -0.2
HDAC6-215ENST00000465457 SERPINH1P50454 418 aaKnown RBP13.78□□□□□ -0.2
HDAC6-215ENST00000465457 NEK3P51956 506 aa13.78□□□□□ -0.2
HDAC6-215ENST00000465457 ILKQ13418 452 aa13.78□□□□□ -0.2
HDAC6-215ENST00000465457 MPP2Q14168 576 aa13.78□□□□□ -0.2
HDAC6-215ENST00000465457 MPPE1Q53F39 396 aa13.78□□□□□ -0.2
HDAC6-215ENST00000465457 INO80DQ53TQ3 878 aaPredicted RBP13.78□□□□□ -0.2
HDAC6-215ENST00000465457 ZNF776Q68DI1 518 aaPredicted RBP13.78□□□□□ -0.2
HDAC6-215ENST00000465457 KIAA0930Q6ICG6 404 aaPredicted RBP13.78□□□□□ -0.2
HDAC6-215ENST00000465457 LCA5Q86VQ0 697 aa13.78□□□□□ -0.2
HDAC6-215ENST00000465457 CNTN4Q8IWV2 1026 aa13.78□□□□□ -0.2
HDAC6-215ENST00000465457 CACNA2D3Q8IZS8 1091 aa13.78□□□□□ -0.2
HDAC6-215ENST00000465457 ARRDC2Q8TBH0 407 aa13.78□□□□□ -0.2
HDAC6-215ENST00000465457 CALML6Q8TD86 181 aa13.78□□□□□ -0.2
HDAC6-215ENST00000465457 GANCQ8TET4 914 aa13.78□□□□□ -0.2
HDAC6-215ENST00000465457 SNRNP27Q8WVK2 155 aaKnown RBP13.78□□□□□ -0.2
HDAC6-215ENST00000465457 TMA16Q96EY4 203 aaKnown RBP13.78□□□□□ -0.2
HDAC6-215ENST00000465457 MYEOVQ96EZ4 313 aa13.78□□□□□ -0.2
HDAC6-215ENST00000465457 IFT43Q96FT9 208 aa13.78□□□□□ -0.2
HDAC6-215ENST00000465457 ZNF578Q96N58 590 aaPredicted RBP13.78□□□□□ -0.2
HDAC6-215ENST00000465457 APOL2Q9BQE5 337 aa13.78□□□□□ -0.2
HDAC6-215ENST00000465457 SPON2Q9BUD6 331 aa13.78□□□□□ -0.2
HDAC6-215ENST00000465457 MUC3BQ9H195 1237 aa13.78□□□□□ -0.2
HDAC6-215ENST00000465457 RSPH9Q9H1X1 276 aaPredicted RBP13.78□□□□□ -0.2
HDAC6-215ENST00000465457 VPS11Q9H270 941 aa13.78□□□□□ -0.2
HDAC6-215ENST00000465457 C20orf96Q9NUD7 363 aaPredicted RBP13.78□□□□□ -0.2
HDAC6-215ENST00000465457 PIH1D1Q9NWS0 290 aaKnown RBP13.78□□□□□ -0.2
HDAC6-215ENST00000465457 FBXL12Q9NXK8 326 aa13.78□□□□□ -0.2
HDAC6-215ENST00000465457 IL17BQ9UHF5 180 aa13.78□□□□□ -0.2
HDAC6-215ENST00000465457 RP1P56715 2156 aa13.78□□□□□ -0.2
HDAC6-215ENST00000465457 LOC285095A0A1B0GVY8 99 aa13.77□□□□□ -0.21
HDAC6-215ENST00000465457 NBASA2RRP1 2371 aa13.77□□□□□ -0.21
HDAC6-215ENST00000465457 MYO9AB2RTY4 2548 aa13.77□□□□□ -0.21
HDAC6-215ENST00000465457 TBL1XO60907 577 aa13.77□□□□□ -0.21
HDAC6-215ENST00000465457 SIN3BO75182 1162 aa13.77□□□□□ -0.21
HDAC6-215ENST00000465457 RFPL1O75677 317 aa13.77□□□□□ -0.21
HDAC6-215ENST00000465457 CYBBP04839 570 aa13.77□□□□□ -0.21
HDAC6-215ENST00000465457 MMP2P08253 660 aa13.77□□□□□ -0.21
HDAC6-215ENST00000465457 ITGA2BP08514 1039 aa13.77□□□□□ -0.21
HDAC6-215ENST00000465457 PYGBP11216 843 aa13.77□□□□□ -0.21
HDAC6-215ENST00000465457 CD70P32970 193 aa13.77□□□□□ -0.21
HDAC6-215ENST00000465457 ARRB1P49407 418 aaPredicted RBP13.77□□□□□ -0.21
HDAC6-215ENST00000465457 LIMK2P53671 638 aa13.77□□□□□ -0.21
HDAC6-215ENST00000465457 UCNP55089 124 aa13.77□□□□□ -0.21
HDAC6-215ENST00000465457 WDR4P57081 412 aaKnown RBP13.77□□□□□ -0.21
HDAC6-215ENST00000465457 DSC2Q02487 901 aa13.77□□□□□ -0.21
HDAC6-215ENST00000465457 ZBTB16Q05516 673 aa13.77□□□□□ -0.21
HDAC6-215ENST00000465457 NSUN2Q08J23 767 aaKnown RBP eCLIP13.77□□□□□ -0.21
HDAC6-215ENST00000465457 SLC12A1Q13621 1099 aa13.77□□□□□ -0.21
HDAC6-215ENST00000465457 CDH18Q13634 790 aa13.77□□□□□ -0.21
HDAC6-215ENST00000465457 LRRC14Q15048 493 aa13.77□□□□□ -0.21
HDAC6-215ENST00000465457 SLC1A5Q15758 541 aa13.77□□□□□ -0.21
HDAC6-215ENST00000465457 INSCQ1MX18 579 aa13.77□□□□□ -0.21
HDAC6-215ENST00000465457 FAM182AQ5T1J6 154 aa13.77□□□□□ -0.21
HDAC6-215ENST00000465457 CDCP2Q5VXM1 449 aa13.77□□□□□ -0.21
HDAC6-215ENST00000465457 RNF219Q5W0B1 726 aaPredicted RBP13.77□□□□□ -0.21
HDAC6-215ENST00000465457 CXorf57Q6NSI4 855 aaKnown RBP13.77□□□□□ -0.21
HDAC6-215ENST00000465457 KYAT3Q6YP21 454 aaKnown RBP13.77□□□□□ -0.21
HDAC6-215ENST00000465457 KIAA0408Q6ZU52 694 aa13.77□□□□□ -0.21
HDAC6-215ENST00000465457 SH2D5Q6ZV89 423 aa13.77□□□□□ -0.21
HDAC6-215ENST00000465457 CACTIN-AS1Q8N1I8 211 aa13.77□□□□□ -0.21
HDAC6-215ENST00000465457 EXD3Q8N9H8 876 aa13.77□□□□□ -0.21
HDAC6-215ENST00000465457 DCAF4L2Q8NA75 395 aa13.77□□□□□ -0.21
HDAC6-215ENST00000465457 OR7D4Q8NG98 312 aa13.77□□□□□ -0.21
HDAC6-215ENST00000465457 RAB3IL1Q8TBN0 382 aa13.77□□□□□ -0.21
HDAC6-215ENST00000465457 CHD5Q8TDI0 1954 aa13.77□□□□□ -0.21
HDAC6-215ENST00000465457 TCP10LQ8TDR4 215 aa13.77□□□□□ -0.21
HDAC6-215ENST00000465457 LRRC8CQ8TDW0 803 aa13.77□□□□□ -0.21
HDAC6-215ENST00000465457 ISL2Q96A47 359 aa13.77□□□□□ -0.21
HDAC6-215ENST00000465457 SERAC1Q96JX3 654 aa13.77□□□□□ -0.21
HDAC6-215ENST00000465457 RBBP8Q99708 897 aa13.77□□□□□ -0.21
HDAC6-215ENST00000465457 SEMA3CQ99985 751 aa13.77□□□□□ -0.21
HDAC6-215ENST00000465457 C2orf49Q9BVC5 232 aaPredicted RBP13.77□□□□□ -0.21
HDAC6-215ENST00000465457 CHRAC1Q9NRG0 131 aa13.77□□□□□ -0.21
HDAC6-215ENST00000465457 RIMKLBQ9ULI2 386 aa13.77□□□□□ -0.21
HDAC6-215ENST00000465457 CA5BQ9Y2D0 317 aa13.77□□□□□ -0.21
HDAC6-215ENST00000465457 A0A0D9SEW6 157 aa13.76□□□□□ -0.21
HDAC6-215ENST00000465457 FOXO6A8MYZ6 492 aa13.76□□□□□ -0.21
HDAC6-215ENST00000465457 TCP11X1B4DZS4 312 aa13.76□□□□□ -0.21
HDAC6-215ENST00000465457 TLR4O00206 839 aa13.76□□□□□ -0.21
HDAC6-215ENST00000465457 TERTO14746 1132 aaKnown RBP13.76□□□□□ -0.21
HDAC6-215ENST00000465457 GLRA3O75311 464 aa13.76□□□□□ -0.21
HDAC6-215ENST00000465457 RNASEH2AO75792 299 aaKnown RBP13.76□□□□□ -0.21
HDAC6-215ENST00000465457 DXOO77932 396 aaKnown RBP13.76□□□□□ -0.21
HDAC6-215ENST00000465457 GSTA1P08263 222 aa13.76□□□□□ -0.21
HDAC6-215ENST00000465457 ERVK-10P10266 1014 aa13.76□□□□□ -0.21
HDAC6-215ENST00000465457 PABPC1P11940 636 aaKnown RBP13.76□□□□□ -0.21
HDAC6-215ENST00000465457 TPH1P17752 444 aa13.76□□□□□ -0.21
HDAC6-215ENST00000465457 CRHR1P34998 444 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms