RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 RBM22Q9NW64 420 aaKnown RBP eCLIP17.05■□□□□ 0.323e-6■■□□□ 13.5
HMGN1-210ENST00000464078 ATXN10Q9UBB4 475 aa17.05■□□□□ 0.32
HMGN1-210ENST00000464078 IP6K2Q9UHH9 426 aa17.05■□□□□ 0.32
HMGN1-210ENST00000464078 BLACEA4D250 179 aa17.04■□□□□ 0.32
HMGN1-210ENST00000464078 CHUKO15111 745 aa17.04■□□□□ 0.32
HMGN1-210ENST00000464078 MTA2O94776 668 aa17.04■□□□□ 0.32
HMGN1-210ENST00000464078 UBXN7O94888 489 aa17.04■□□□□ 0.32
HMGN1-210ENST00000464078 HLA-DQB2P05538 268 aa17.04■□□□□ 0.32
HMGN1-210ENST00000464078 FURINP09958 794 aa17.04■□□□□ 0.32
HMGN1-210ENST00000464078 FGF5P12034 268 aa17.04■□□□□ 0.32
HMGN1-210ENST00000464078 ZNF8P17098 575 aaPredicted RBP17.04■□□□□ 0.32
HMGN1-210ENST00000464078 NR1D1P20393 614 aa17.04■□□□□ 0.32
HMGN1-210ENST00000464078 ARSEP51690 589 aa17.04■□□□□ 0.32
HMGN1-210ENST00000464078 DCDC1P59894 354 aa17.04■□□□□ 0.32
HMGN1-210ENST00000464078 NIPAL4Q0D2K0 466 aa17.04■□□□□ 0.32
HMGN1-210ENST00000464078 MMRN1Q13201 1228 aa17.04■□□□□ 0.32
HMGN1-210ENST00000464078 QPCTQ16769 361 aa17.04■□□□□ 0.32
HMGN1-210ENST00000464078 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.04■□□□□ 0.32
HMGN1-210ENST00000464078 CCDC183Q5T5S1 534 aa17.04■□□□□ 0.32
HMGN1-210ENST00000464078 ASB18Q6ZVZ8 466 aa17.04■□□□□ 0.32
HMGN1-210ENST00000464078 APLFQ8IW19 511 aaPredicted RBP17.04■□□□□ 0.32
HMGN1-210ENST00000464078 CCHCR1Q8TD31 782 aa17.04■□□□□ 0.32
HMGN1-210ENST00000464078 STAMBPL1Q96FJ0 436 aa17.04■□□□□ 0.32
HMGN1-210ENST00000464078 OR6C1Q96RD1 312 aa17.04■□□□□ 0.32
HMGN1-210ENST00000464078 KLC4Q9NSK0 619 aa17.04■□□□□ 0.32
HMGN1-210ENST00000464078 TTLL3Q9Y4R7 772 aa17.04■□□□□ 0.32
HMGN1-210ENST00000464078 GTF3C3Q9Y5Q9 886 aa17.04■□□□□ 0.32
HMGN1-210ENST00000464078 ANKRD66B4E2M5 251 aa17.03■□□□□ 0.32
HMGN1-210ENST00000464078 KIAA0754O94854 1291 aa17.03■□□□□ 0.32
HMGN1-210ENST00000464078 NDUFA10O95299 355 aa17.03■□□□□ 0.32
HMGN1-210ENST00000464078 CD48P09326 243 aa17.03■□□□□ 0.32
HMGN1-210ENST00000464078 SH3BP2P78314 561 aa17.03■□□□□ 0.32
HMGN1-210ENST00000464078 DPYSL3Q14195 570 aa17.03■□□□□ 0.32
HMGN1-210ENST00000464078 ZNF569Q5MCW4 686 aa17.03■□□□□ 0.32
HMGN1-210ENST00000464078 CCDC122Q5T0U0 273 aa17.03■□□□□ 0.32
HMGN1-210ENST00000464078 PDPK2PQ6A1A2 396 aa17.03■□□□□ 0.32
HMGN1-210ENST00000464078 CYB5D1Q6P9G0 228 aa17.03■□□□□ 0.32
HMGN1-210ENST00000464078 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.03■□□□□ 0.32
HMGN1-210ENST00000464078 TGM7Q96PF1 710 aa17.03■□□□□ 0.32
HMGN1-210ENST00000464078 ZNF670Q9BS34 389 aa17.03■□□□□ 0.32
HMGN1-210ENST00000464078 TIMM29Q9BSF4 260 aa17.03■□□□□ 0.32
HMGN1-210ENST00000464078 ZSCAN5AQ9BUG6 496 aa17.03■□□□□ 0.32
HMGN1-210ENST00000464078 MLPHQ9BV36 600 aaPredicted RBP17.03■□□□□ 0.32
HMGN1-210ENST00000464078 OR2AG1Q9H205 316 aa17.03■□□□□ 0.32
HMGN1-210ENST00000464078 OSGEPL1Q9H4B0 414 aa17.03■□□□□ 0.32
HMGN1-210ENST00000464078 TRIM39Q9HCM9 518 aa17.03■□□□□ 0.32
HMGN1-210ENST00000464078 POT1Q9NUX5 634 aa17.03■□□□□ 0.32
HMGN1-210ENST00000464078 SCHIP1Q9P0W5 487 aaPredicted RBP17.03■□□□□ 0.32
HMGN1-210ENST00000464078 ZNF624Q9P2J8 865 aaPredicted RBP17.03■□□□□ 0.32
HMGN1-210ENST00000464078 ANAPC7Q9UJX3 599 aa17.03■□□□□ 0.32
HMGN1-210ENST00000464078 SLC30A1Q9Y6M5 507 aa17.03■□□□□ 0.32
HMGN1-210ENST00000464078 CREG1O75629 220 aa17.02■□□□□ 0.32
HMGN1-210ENST00000464078 VIPP01282 170 aa17.02■□□□□ 0.32
HMGN1-210ENST00000464078 MT-ND3P03897 115 aa17.02■□□□□ 0.32
HMGN1-210ENST00000464078 MMP2P08253 660 aa17.02■□□□□ 0.32
HMGN1-210ENST00000464078 TYRP1P17643 537 aa17.02■□□□□ 0.32
HMGN1-210ENST00000464078 SLC19A1P41440 591 aa17.02■□□□□ 0.32
HMGN1-210ENST00000464078 MLLT10P55197 1068 aa17.02■□□□□ 0.32
HMGN1-210ENST00000464078 ERV3-1Q14264 604 aa17.02■□□□□ 0.32
HMGN1-210ENST00000464078 WASH2PQ6VEQ5 465 aa17.02■□□□□ 0.32
HMGN1-210ENST00000464078 RASGRP3Q8IV61 690 aa17.02■□□□□ 0.32
HMGN1-210ENST00000464078 TRIM48Q8IWZ4 208 aa17.02■□□□□ 0.32
HMGN1-210ENST00000464078 RBM12BQ8IXT5 1001 aaKnown RBP17.02■□□□□ 0.32
HMGN1-210ENST00000464078 KLHL6Q8WZ60 621 aa17.02■□□□□ 0.32
HMGN1-210ENST00000464078 SEC14L1Q92503 715 aa17.02■□□□□ 0.32
HMGN1-210ENST00000464078 EID2BQ96D98 161 aa17.02■□□□□ 0.32
HMGN1-210ENST00000464078 ADGRE3Q9BY15 652 aa17.02■□□□□ 0.32
HMGN1-210ENST00000464078 RAB33BQ9H082 229 aa17.02■□□□□ 0.32
HMGN1-210ENST00000464078 BRD8Q9H0E9 1235 aa17.02■□□□□ 0.32
HMGN1-210ENST00000464078 LRRC4CQ9HCJ2 640 aa17.02■□□□□ 0.32
HMGN1-210ENST00000464078 WASH6PQ9NQA3 447 aa17.02■□□□□ 0.32
HMGN1-210ENST00000464078 RAD18Q9NS91 495 aa17.02■□□□□ 0.32
HMGN1-210ENST00000464078 EPHA6Q9UF33 1036 aa17.02■□□□□ 0.32
HMGN1-210ENST00000464078 LNPEPQ9UIQ6 1025 aa17.02■□□□□ 0.32
HMGN1-210ENST00000464078 TLK1Q9UKI8 766 aa17.02■□□□□ 0.32
HMGN1-210ENST00000464078 HIVEP3Q5T1R4 2406 aa17.02■□□□□ 0.32
HMGN1-210ENST00000464078 C21orf140B9A014 251 aa17.01■□□□□ 0.31
HMGN1-210ENST00000464078 SLC25A14O95258 325 aaPredicted RBP17.01■□□□□ 0.31
HMGN1-210ENST00000464078 KRT7P08729 469 aa17.01■□□□□ 0.31
HMGN1-210ENST00000464078 MX2P20592 715 aa17.01■□□□□ 0.31
HMGN1-210ENST00000464078 LEPRP48357 1165 aaKnown RBP17.01■□□□□ 0.31
HMGN1-210ENST00000464078 SEPHS1P49903 392 aa17.01■□□□□ 0.31
HMGN1-210ENST00000464078 DNASE1L3Q13609 305 aa17.01■□□□□ 0.31
HMGN1-210ENST00000464078 C4orf17Q53FE4 359 aa17.01■□□□□ 0.31
HMGN1-210ENST00000464078 AGAP9Q5VTM2 703 aa17.01■□□□□ 0.31
HMGN1-210ENST00000464078 ABRAXAS1Q6UWZ7 409 aa17.01■□□□□ 0.31
HMGN1-210ENST00000464078 ADGRG6Q86SQ4 1221 aa17.01■□□□□ 0.31
HMGN1-210ENST00000464078 TRAM1L1Q8N609 369 aa17.01■□□□□ 0.31
HMGN1-210ENST00000464078 GALNT11Q8NCW6 608 aa17.01■□□□□ 0.31
HMGN1-210ENST00000464078 RSC1A1Q92681 617 aa17.01■□□□□ 0.31
HMGN1-210ENST00000464078 FAF2Q96CS3 445 aa17.01■□□□□ 0.31
HMGN1-210ENST00000464078 HDAC11Q96DB2 347 aa17.01■□□□□ 0.31
HMGN1-210ENST00000464078 FCRL4Q96PJ5 515 aa17.01■□□□□ 0.31
HMGN1-210ENST00000464078 NUP85Q9BW27 656 aa17.01■□□□□ 0.31
HMGN1-210ENST00000464078 TWSG1Q9GZX9 223 aa17.01■□□□□ 0.31
HMGN1-210ENST00000464078 THAP2Q9H0W7 228 aa17.01■□□□□ 0.31
HMGN1-210ENST00000464078 SLC40A1Q9NP59 571 aa17.01■□□□□ 0.31
HMGN1-210ENST00000464078 SEMA5BQ9P283 1151 aa17.01■□□□□ 0.31
HMGN1-210ENST00000464078 SLC23A2Q9UGH3 650 aa17.01■□□□□ 0.31
HMGN1-210ENST00000464078 PADI1Q9ULC6 663 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms