RNA–Protein interactions for RNA: ENST00000463479.1

PLOD3-210, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-210ENST00000463479 NKAIN2Q5VXU1 208 aa12.84□□□□□ -0.35
PLOD3-210ENST00000463479 B4GALNT4Q76KP1 1039 aa12.84□□□□□ -0.35
PLOD3-210ENST00000463479 CACNA2D3Q8IZS8 1091 aa12.84□□□□□ -0.35
PLOD3-210ENST00000463479 PTCD2Q8WV60 388 aaKnown RBP12.84□□□□□ -0.35
PLOD3-210ENST00000463479 ATG4AQ8WYN0 398 aa12.84□□□□□ -0.35
PLOD3-210ENST00000463479 MAGOHBQ96A72 148 aaKnown RBP12.84□□□□□ -0.35
PLOD3-210ENST00000463479 NSMCE3Q96MG7 304 aa12.84□□□□□ -0.35
PLOD3-210ENST00000463479 GSDMCQ9BYG8 508 aa12.84□□□□□ -0.35
PLOD3-210ENST00000463479 CDH19Q9H159 772 aa12.84□□□□□ -0.35
PLOD3-210ENST00000463479 RBM22Q9NW64 420 aaKnown RBP eCLIP12.84□□□□□ -0.35
PLOD3-210ENST00000463479 FEZ2Q9UHY8 353 aaPredicted RBP12.84□□□□□ -0.35
PLOD3-210ENST00000463479 TUBD1Q9UJT1 453 aa12.84□□□□□ -0.35
PLOD3-210ENST00000463479 R3HDM2Q9Y2K5 976 aaKnown RBP12.84□□□□□ -0.35
PLOD3-210ENST00000463479 KCNK1O00180 336 aa12.83□□□□□ -0.36
PLOD3-210ENST00000463479 PDE2AO00408 941 aaPredicted RBP12.83□□□□□ -0.36
PLOD3-210ENST00000463479 TRAFD1O14545 582 aaPredicted RBP12.83□□□□□ -0.36
PLOD3-210ENST00000463479 LIASO43766 372 aa12.83□□□□□ -0.36
PLOD3-210ENST00000463479 JCHAINP01591 159 aa12.83□□□□□ -0.36
PLOD3-210ENST00000463479 NTRK1P04629 796 aa12.83□□□□□ -0.36
PLOD3-210ENST00000463479 CEACAM5P06731 702 aa12.83□□□□□ -0.36
PLOD3-210ENST00000463479 MPSTP25325 297 aa12.83□□□□□ -0.36
PLOD3-210ENST00000463479 RBL1P28749 1068 aa12.83□□□□□ -0.36
PLOD3-210ENST00000463479 CSF2RBP32927 897 aa12.83□□□□□ -0.36
PLOD3-210ENST00000463479 CASRP41180 1078 aa12.83□□□□□ -0.36
PLOD3-210ENST00000463479 GPR3P46089 330 aa12.83□□□□□ -0.36
PLOD3-210ENST00000463479 CCR10P46092 362 aa12.83□□□□□ -0.36
PLOD3-210ENST00000463479 ILF3Q12906 894 aaKnown RBP eCLIP12.83□□□□□ -0.36
PLOD3-210ENST00000463479 TRA2AQ13595 282 aaKnown RBP eCLIP12.83□□□□□ -0.36
PLOD3-210ENST00000463479 PRKD1Q15139 912 aaPredicted RBP12.83□□□□□ -0.36
PLOD3-210ENST00000463479 CLPPQ16740 277 aaPredicted RBP12.83□□□□□ -0.36
PLOD3-210ENST00000463479 SLC30A9Q6PML9 568 aa12.83□□□□□ -0.36
PLOD3-210ENST00000463479 HEATR4Q86WZ0 1026 aa12.83□□□□□ -0.36
PLOD3-210ENST00000463479 CREG2Q8IUH2 290 aa12.83□□□□□ -0.36
PLOD3-210ENST00000463479 NAGSQ8N159 534 aa12.83□□□□□ -0.36
PLOD3-210ENST00000463479 AGBL5Q8NDL9 886 aa12.83□□□□□ -0.36
PLOD3-210ENST00000463479 OR4D9Q8NGE8 314 aa12.83□□□□□ -0.36
PLOD3-210ENST00000463479 FATE1Q969F0 183 aa12.83□□□□□ -0.36
PLOD3-210ENST00000463479 COQ10AQ96MF6 247 aa12.83□□□□□ -0.36
PLOD3-210ENST00000463479 QKIQ96PU8 341 aaKnown RBP eCLIP12.83□□□□□ -0.36
PLOD3-210ENST00000463479 VAT1Q99536 393 aa12.83□□□□□ -0.36
PLOD3-210ENST00000463479 NT5MQ9NPB1 228 aa12.83□□□□□ -0.36
PLOD3-210ENST00000463479 SMARCAL1Q9NZC9 954 aa12.83□□□□□ -0.36
PLOD3-210ENST00000463479 TMEM9Q9P0T7 183 aa12.83□□□□□ -0.36
PLOD3-210ENST00000463479 KLHL8Q9P2G9 620 aaPredicted RBP12.83□□□□□ -0.36
PLOD3-210ENST00000463479 B4GALT6Q9UBX8 382 aa12.83□□□□□ -0.36
PLOD3-210ENST00000463479 CDC23Q9UJX2 597 aa12.83□□□□□ -0.36
PLOD3-210ENST00000463479 DNPEPQ9ULA0 475 aa12.83□□□□□ -0.36
PLOD3-210ENST00000463479 ST14Q9Y5Y6 855 aa12.83□□□□□ -0.36
PLOD3-210ENST00000463479 IGHV1OR21-1A0A087WYE8 117 aa12.82□□□□□ -0.36
PLOD3-210ENST00000463479 CLEC18AA5D8T8 446 aa12.82□□□□□ -0.36
PLOD3-210ENST00000463479 ZNF891A8MT65 544 aaPredicted RBP12.82□□□□□ -0.36
PLOD3-210ENST00000463479 FANCGO15287 622 aa12.82□□□□□ -0.36
PLOD3-210ENST00000463479 PPM1DO15297 605 aa12.82□□□□□ -0.36
PLOD3-210ENST00000463479 ZW10O43264 779 aa12.82□□□□□ -0.36
PLOD3-210ENST00000463479 RAD1O60671 282 aa12.82□□□□□ -0.36
PLOD3-210ENST00000463479 PHF2O75151 1096 aa12.82□□□□□ -0.36
PLOD3-210ENST00000463479 THRAP10827 490 aa12.82□□□□□ -0.36
PLOD3-210ENST00000463479 GP1BBP13224 206 aa12.82□□□□□ -0.36
PLOD3-210ENST00000463479 CR2P20023 1033 aa12.82□□□□□ -0.36
PLOD3-210ENST00000463479 STIP1P31948 543 aaKnown RBP12.82□□□□□ -0.36
PLOD3-210ENST00000463479 CSTF2P33240 577 aaKnown RBP eCLIP12.82□□□□□ -0.36
PLOD3-210ENST00000463479 HSPA9P38646 679 aaKnown RBP12.82□□□□□ -0.36
PLOD3-210ENST00000463479 GNPDA1P46926 289 aa12.82□□□□□ -0.36
PLOD3-210ENST00000463479 POLR2LP62875 67 aaKnown RBP12.82□□□□□ -0.36
PLOD3-210ENST00000463479 SLC10A7Q0GE19 358 aa12.82□□□□□ -0.36
PLOD3-210ENST00000463479 BIRC2Q13490 618 aa12.82□□□□□ -0.36
PLOD3-210ENST00000463479 WHAMMP3Q1A5X7 153 aa12.82□□□□□ -0.36
PLOD3-210ENST00000463479 CLEC18BQ6UXF7 455 aa12.82□□□□□ -0.36
PLOD3-210ENST00000463479 PID1Q7Z2X4 250 aa12.82□□□□□ -0.36
PLOD3-210ENST00000463479 CCDC89Q8N998 374 aa12.82□□□□□ -0.36
PLOD3-210ENST00000463479 CLEC18CQ8NCF0 446 aa12.82□□□□□ -0.36
PLOD3-210ENST00000463479 GRK7Q8WTQ7 553 aa12.82□□□□□ -0.36
PLOD3-210ENST00000463479 NUS1Q96E22 293 aa12.82□□□□□ -0.36
PLOD3-210ENST00000463479 AGAP3Q96P47 875 aa12.82□□□□□ -0.36
PLOD3-210ENST00000463479 TMEM121Q9BTD3 319 aa12.82□□□□□ -0.36
PLOD3-210ENST00000463479 DDA1Q9BW61 102 aa12.82□□□□□ -0.36
PLOD3-210ENST00000463479 TEX101Q9BY14 249 aa12.82□□□□□ -0.36
PLOD3-210ENST00000463479 FRMD8Q9BZ67 464 aaPredicted RBP12.82□□□□□ -0.36
PLOD3-210ENST00000463479 C10orf88Q9H8K7 445 aa12.82□□□□□ -0.36
PLOD3-210ENST00000463479 ZNF71Q9NQZ8 489 aaPredicted RBP12.82□□□□□ -0.36
PLOD3-210ENST00000463479 PHPT1Q9NRX4 125 aaPredicted RBP12.82□□□□□ -0.36
PLOD3-210ENST00000463479 TRNAU1APQ9NX07 287 aaKnown RBP12.82□□□□□ -0.36
PLOD3-210ENST00000463479 OCIAD1Q9NX40 245 aa12.82□□□□□ -0.36
PLOD3-210ENST00000463479 SLC39A1Q9NY26 324 aa12.82□□□□□ -0.36
PLOD3-210ENST00000463479 ANAPC2Q9UJX6 822 aa12.82□□□□□ -0.36
PLOD3-210ENST00000463479 SUFUQ9UMX1 484 aa12.82□□□□□ -0.36
PLOD3-210ENST00000463479 BSNQ9UPA5 3926 aa12.81□□□□□ -0.36
PLOD3-210ENST00000463479 FLNCQ14315 2725 aa12.81□□□□□ -0.36
PLOD3-210ENST00000463479 CCDC188H7C350 402 aa12.81□□□□□ -0.36
PLOD3-210ENST00000463479 NKX2-8O15522 239 aa12.81□□□□□ -0.36
PLOD3-210ENST00000463479 DUX1O43812 170 aa12.81□□□□□ -0.36
PLOD3-210ENST00000463479 IFNB1P01574 187 aa12.81□□□□□ -0.36
PLOD3-210ENST00000463479 PRKAR1AP10644 381 aa12.81□□□□□ -0.36
PLOD3-210ENST00000463479 TNNT3P45378 269 aaPredicted RBP12.81□□□□□ -0.36
PLOD3-210ENST00000463479 POLD2P49005 469 aa12.81□□□□□ -0.36
PLOD3-210ENST00000463479 SCNN1BP51168 640 aa12.81□□□□□ -0.36
PLOD3-210ENST00000463479 IFI35P80217 286 aaPredicted RBP12.81□□□□□ -0.36
PLOD3-210ENST00000463479 CTBSQ01459 385 aa12.81□□□□□ -0.36
PLOD3-210ENST00000463479 SQSTM1Q13501 440 aa12.81□□□□□ -0.36
PLOD3-210ENST00000463479 CNGA3Q16281 694 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms