RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 NRSN2Q9GZP1 204 aa12.91□□□□□ -0.34
R3HDM1-213ENST00000463230 RAB6BQ9NRW1 208 aa12.91□□□□□ -0.34
R3HDM1-213ENST00000463230 KCND1Q9NSA2 647 aa12.91□□□□□ -0.34
R3HDM1-213ENST00000463230 NLE1Q9NVX2 485 aaPredicted RBP12.91□□□□□ -0.34
R3HDM1-213ENST00000463230 SNX12Q9UMY4 172 aa12.91□□□□□ -0.34
R3HDM1-213ENST00000463230 ARHGEF17Q96PE2 2063 aaPredicted RBP12.91□□□□□ -0.34
R3HDM1-213ENST00000463230 GOLGA6L10A0A0M3HER8 536 aa12.9□□□□□ -0.34
R3HDM1-213ENST00000463230 AGAP14A8MT82 685 aa12.9□□□□□ -0.34
R3HDM1-213ENST00000463230 NTN3O00634 580 aaPredicted RBP12.9□□□□□ -0.34
R3HDM1-213ENST00000463230 USP12O75317 370 aa12.9□□□□□ -0.34
R3HDM1-213ENST00000463230 SRP72O76094 671 aaKnown RBP12.9□□□□□ -0.34
R3HDM1-213ENST00000463230 PRAMEF1O95521 474 aa12.9□□□□□ -0.34
R3HDM1-213ENST00000463230 ITGALP20701 1170 aa12.9□□□□□ -0.34
R3HDM1-213ENST00000463230 RPL22P35268 128 aaKnown RBP12.9□□□□□ -0.34
R3HDM1-213ENST00000463230 GPR3P46089 330 aa12.9□□□□□ -0.34
R3HDM1-213ENST00000463230 PERM1Q5SV97 790 aa12.9□□□□□ -0.34
R3HDM1-213ENST00000463230 SLC30A9Q6PML9 568 aa12.9□□□□□ -0.34
R3HDM1-213ENST00000463230 FAM151BQ6UXP7 276 aa12.9□□□□□ -0.34
R3HDM1-213ENST00000463230 PPP1R21Q6ZMI0 780 aa12.9□□□□□ -0.34
R3HDM1-213ENST00000463230 RBM44Q6ZP01 1051 aaKnown RBP12.9□□□□□ -0.34
R3HDM1-213ENST00000463230 CASS4Q9NQ75 786 aa12.9□□□□□ -0.34
R3HDM1-213ENST00000463230 TRMT1Q9NXH9 659 aaKnown RBP12.9□□□□□ -0.34
R3HDM1-213ENST00000463230 TMPRSS11EQ9UL52 423 aa12.9□□□□□ -0.34
R3HDM1-213ENST00000463230 MROH6A6NGR9 719 aa12.9□□□□□ -0.34
R3HDM1-213ENST00000463230 CDK14O94921 469 aa12.9□□□□□ -0.34
R3HDM1-213ENST00000463230 AK4P27144 223 aaPredicted RBP12.9□□□□□ -0.34
R3HDM1-213ENST00000463230 XIAPP98170 497 aa12.9□□□□□ -0.34
R3HDM1-213ENST00000463230 TMEM115Q12893 351 aaPredicted RBP12.9□□□□□ -0.34
R3HDM1-213ENST00000463230 NFATC2Q13469 925 aa12.9□□□□□ -0.34
R3HDM1-213ENST00000463230 OLIG2Q13516 323 aa12.9□□□□□ -0.34
R3HDM1-213ENST00000463230 SNX20Q7Z614 316 aa12.9□□□□□ -0.34
R3HDM1-213ENST00000463230 TTC25Q96NG3 672 aa12.9□□□□□ -0.34
R3HDM1-213ENST00000463230 COL27A1Q8IZC6 1860 aaPredicted RBP12.89□□□□□ -0.35
R3HDM1-213ENST00000463230 KIR2DS5A0A0G2JLQ3 304 aa12.89□□□□□ -0.35
R3HDM1-213ENST00000463230 A0A0G2JNG1 304 aa12.89□□□□□ -0.35
R3HDM1-213ENST00000463230 HEATR9A2RTY3 570 aa12.89□□□□□ -0.35
R3HDM1-213ENST00000463230 PRR19A6NJB7 356 aa12.89□□□□□ -0.35
R3HDM1-213ENST00000463230 KIR2DS3K7RE56 304 aa12.89□□□□□ -0.35
R3HDM1-213ENST00000463230 RALBP11234 206 aa12.89□□□□□ -0.35
R3HDM1-213ENST00000463230 MYF5P13349 255 aa12.89□□□□□ -0.35
R3HDM1-213ENST00000463230 ZNF7P17097 686 aaPredicted RBP12.89□□□□□ -0.35
R3HDM1-213ENST00000463230 FASLGP48023 281 aa12.89□□□□□ -0.35
R3HDM1-213ENST00000463230 FNTAP49354 379 aa12.89□□□□□ -0.35
R3HDM1-213ENST00000463230 KIR2DS5Q14953 304 aa12.89□□□□□ -0.35
R3HDM1-213ENST00000463230 RTP5Q14D33 572 aa12.89□□□□□ -0.35
R3HDM1-213ENST00000463230 SKIDA1Q1XH10 827 aa12.89□□□□□ -0.35
R3HDM1-213ENST00000463230 GPRC6AQ5T6X5 926 aa12.89□□□□□ -0.35
R3HDM1-213ENST00000463230 AGAP9Q5VTM2 703 aa12.89□□□□□ -0.35
R3HDM1-213ENST00000463230 WASH2PQ6VEQ5 465 aa12.89□□□□□ -0.35
R3HDM1-213ENST00000463230 CHST15Q7LFX5 561 aaPredicted RBP12.89□□□□□ -0.35
R3HDM1-213ENST00000463230 CCNJLQ8IV13 435 aa12.89□□□□□ -0.35
R3HDM1-213ENST00000463230 DNAAF3Q8N9W5 541 aa12.89□□□□□ -0.35
R3HDM1-213ENST00000463230 GDAP1Q8TB36 358 aa12.89□□□□□ -0.35
R3HDM1-213ENST00000463230 SH3KBP1Q96B97 665 aa12.89□□□□□ -0.35
R3HDM1-213ENST00000463230 CNTNAP3BQ96NU0 1288 aa12.89□□□□□ -0.35
R3HDM1-213ENST00000463230 DPYSL5Q9BPU6 564 aa12.89□□□□□ -0.35
R3HDM1-213ENST00000463230 CNTNAP3Q9BZ76 1288 aa12.89□□□□□ -0.35
R3HDM1-213ENST00000463230 STN1Q9H668 368 aaKnown RBP12.89□□□□□ -0.35
R3HDM1-213ENST00000463230 SUDS3Q9H7L9 328 aaPredicted RBP12.89□□□□□ -0.35
R3HDM1-213ENST00000463230 WASH6PQ9NQA3 447 aa12.89□□□□□ -0.35
R3HDM1-213ENST00000463230 FKBPLQ9UIM3 349 aa12.89□□□□□ -0.35
R3HDM1-213ENST00000463230 MYLKQ15746 1914 aa12.89□□□□□ -0.35
R3HDM1-213ENST00000463230 RHPN2P1A8MT19 583 aa12.89□□□□□ -0.35
R3HDM1-213ENST00000463230 ACP5P13686 325 aa12.89□□□□□ -0.35
R3HDM1-213ENST00000463230 TPSB2P20231 275 aa12.89□□□□□ -0.35
R3HDM1-213ENST00000463230 ADRA1DP25100 572 aa12.89□□□□□ -0.35
R3HDM1-213ENST00000463230 MAGEA6P43360 314 aa12.89□□□□□ -0.35
R3HDM1-213ENST00000463230 DMPKQ09013 629 aa12.89□□□□□ -0.35
R3HDM1-213ENST00000463230 TARDBPQ13148 414 aaKnown RBP eCLIP12.89□□□□□ -0.355e-6■■■■□ 20
R3HDM1-213ENST00000463230 SPIDRQ14159 915 aa12.89□□□□□ -0.35
R3HDM1-213ENST00000463230 TCEA2Q15560 299 aa12.89□□□□□ -0.35
R3HDM1-213ENST00000463230 TPSAB1Q15661 275 aa12.89□□□□□ -0.35
R3HDM1-213ENST00000463230 NAGSQ8N159 534 aa12.89□□□□□ -0.35
R3HDM1-213ENST00000463230 SFRP1Q8N474 314 aa12.89□□□□□ -0.35
R3HDM1-213ENST00000463230 ARL14Q8N4G2 192 aa12.89□□□□□ -0.35
R3HDM1-213ENST00000463230 GRK7Q8WTQ7 553 aa12.89□□□□□ -0.35
R3HDM1-213ENST00000463230 MAGOHBQ96A72 148 aaKnown RBP12.89□□□□□ -0.35
R3HDM1-213ENST00000463230 ASB8Q9H765 288 aa12.89□□□□□ -0.35
R3HDM1-213ENST00000463230 LRIT1Q9P2V4 623 aa12.89□□□□□ -0.35
R3HDM1-213ENST00000463230 ST14Q9Y5Y6 855 aa12.89□□□□□ -0.35
R3HDM1-213ENST00000463230 SLC30A1Q9Y6M5 507 aa12.89□□□□□ -0.35
R3HDM1-213ENST00000463230 RNF215Q9Y6U7 377 aa12.89□□□□□ -0.35
R3HDM1-213ENST00000463230 DNAH14Q0VDD8 3507 aa12.89□□□□□ -0.35
R3HDM1-213ENST00000463230 ASXL3Q9C0F0 2248 aa12.88□□□□□ -0.35
R3HDM1-213ENST00000463230 TRBV5-4A0A0C4DH59 114 aa12.88□□□□□ -0.35
R3HDM1-213ENST00000463230 A6NCN8 305 aa12.88□□□□□ -0.35
R3HDM1-213ENST00000463230 CFAP99D6REC4 459 aa12.88□□□□□ -0.35
R3HDM1-213ENST00000463230 BUD23O43709 281 aaKnown RBP12.88□□□□□ -0.35
R3HDM1-213ENST00000463230 PHF2O75151 1096 aa12.88□□□□□ -0.35
R3HDM1-213ENST00000463230 ECEL1O95672 775 aa12.88□□□□□ -0.35
R3HDM1-213ENST00000463230 APRTP07741 180 aa12.88□□□□□ -0.35
R3HDM1-213ENST00000463230 GSTM1P09488 218 aa12.88□□□□□ -0.35
R3HDM1-213ENST00000463230 F3P13726 295 aa12.88□□□□□ -0.35
R3HDM1-213ENST00000463230 MSH3P20585 1137 aa12.88□□□□□ -0.35
R3HDM1-213ENST00000463230 GSTM4Q03013 218 aa12.88□□□□□ -0.35
R3HDM1-213ENST00000463230 SQSTM1Q13501 440 aa12.88□□□□□ -0.35
R3HDM1-213ENST00000463230 BCL7AQ4VC05 210 aa12.88□□□□□ -0.35
R3HDM1-213ENST00000463230 SPRED1Q7Z699 444 aa12.88□□□□□ -0.35
R3HDM1-213ENST00000463230 SLC9B2Q86UD5 537 aa12.88□□□□□ -0.35
R3HDM1-213ENST00000463230 OR52K1Q8NGK4 314 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms