RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 KRT14P02533 472 aa10.46□□□□□ -0.73
TRAPPC12-213ENST00000461577 MSH3P20585 1137 aa10.46□□□□□ -0.73
TRAPPC12-213ENST00000461577 ITGALP20701 1170 aa10.46□□□□□ -0.73
TRAPPC12-213ENST00000461577 AKT1P31749 480 aa10.46□□□□□ -0.73
TRAPPC12-213ENST00000461577 COILP38432 576 aaPredicted RBP10.46□□□□□ -0.73
TRAPPC12-213ENST00000461577 VPS41P49754 854 aa10.46□□□□□ -0.73
TRAPPC12-213ENST00000461577 CLDN6P56747 220 aa10.46□□□□□ -0.73
TRAPPC12-213ENST00000461577 TMEM115Q12893 351 aaPredicted RBP10.46□□□□□ -0.73
TRAPPC12-213ENST00000461577 TRIP13Q15645 432 aaPredicted RBP10.46□□□□□ -0.73
TRAPPC12-213ENST00000461577 CYP1B1Q16678 543 aa10.46□□□□□ -0.73
TRAPPC12-213ENST00000461577 INSCQ1MX18 579 aa10.46□□□□□ -0.73
TRAPPC12-213ENST00000461577 PLA2G4EQ3MJ16 856 aa10.46□□□□□ -0.73
TRAPPC12-213ENST00000461577 PERM1Q5SV97 790 aa10.46□□□□□ -0.73
TRAPPC12-213ENST00000461577 TTC27Q6P3X3 843 aa10.46□□□□□ -0.73
TRAPPC12-213ENST00000461577 CCDC137Q6PK04 289 aaKnown RBP10.46□□□□□ -0.73
TRAPPC12-213ENST00000461577 CCNI2Q6ZMN8 369 aaPredicted RBP10.46□□□□□ -0.73
TRAPPC12-213ENST00000461577 TRAPPC5Q8IUR0 188 aa10.46□□□□□ -0.73
TRAPPC12-213ENST00000461577 GRK7Q8WTQ7 553 aa10.46□□□□□ -0.73
TRAPPC12-213ENST00000461577 CCDC74AQ96AQ1 378 aa10.46□□□□□ -0.73
TRAPPC12-213ENST00000461577 ULK4Q96C45 1275 aa10.46□□□□□ -0.73
TRAPPC12-213ENST00000461577 C19orf43Q9BQ61 176 aa10.46□□□□□ -0.73
TRAPPC12-213ENST00000461577 CCDC3Q9BQI4 270 aa10.46□□□□□ -0.73
TRAPPC12-213ENST00000461577 CASS4Q9NQ75 786 aa10.46□□□□□ -0.73
TRAPPC12-213ENST00000461577 EIF2B3Q9NR50 452 aaKnown RBP10.46□□□□□ -0.73
TRAPPC12-213ENST00000461577 NLE1Q9NVX2 485 aaPredicted RBP10.46□□□□□ -0.73
TRAPPC12-213ENST00000461577 CRLS1Q9UJA2 301 aa10.46□□□□□ -0.73
TRAPPC12-213ENST00000461577 TMPRSS11EQ9UL52 423 aa10.46□□□□□ -0.73
TRAPPC12-213ENST00000461577 CLCA2Q9UQC9 943 aa10.46□□□□□ -0.73
TRAPPC12-213ENST00000461577 KCNK6Q9Y257 313 aa10.46□□□□□ -0.73
TRAPPC12-213ENST00000461577 PCYT1BQ9Y5K3 369 aaPredicted RBP10.46□□□□□ -0.73
TRAPPC12-213ENST00000461577 CCDC78A2IDD5 438 aa10.45□□□□□ -0.74
TRAPPC12-213ENST00000461577 HEATR9A2RTY3 570 aa10.45□□□□□ -0.74
TRAPPC12-213ENST00000461577 RHPN2P1A8MT19 583 aa10.45□□□□□ -0.74
TRAPPC12-213ENST00000461577 AP3B1O00203 1094 aa10.45□□□□□ -0.74
TRAPPC12-213ENST00000461577 CCL22O00626 93 aa10.45□□□□□ -0.74
TRAPPC12-213ENST00000461577 GAPDHSO14556 408 aaPredicted RBP10.45□□□□□ -0.74
TRAPPC12-213ENST00000461577 CHUKO15111 745 aa10.45□□□□□ -0.74
TRAPPC12-213ENST00000461577 GPR39O43194 453 aa10.45□□□□□ -0.74
TRAPPC12-213ENST00000461577 ECEL1O95672 775 aa10.45□□□□□ -0.74
TRAPPC12-213ENST00000461577 RALBP11234 206 aa10.45□□□□□ -0.74
TRAPPC12-213ENST00000461577 SLC2A4P14672 509 aa10.45□□□□□ -0.74
TRAPPC12-213ENST00000461577 GLB1P16278 677 aa10.45□□□□□ -0.74
TRAPPC12-213ENST00000461577 MC4RP32245 332 aa10.45□□□□□ -0.74
TRAPPC12-213ENST00000461577 GRIA1P42261 906 aa10.45□□□□□ -0.74
TRAPPC12-213ENST00000461577 FNTAP49354 379 aa10.45□□□□□ -0.74
TRAPPC12-213ENST00000461577 TERF1P54274 439 aa10.45□□□□□ -0.74
TRAPPC12-213ENST00000461577 MAZP56270 477 aaKnown RBP10.45□□□□□ -0.74
TRAPPC12-213ENST00000461577 SARNPP82979 210 aaKnown RBP10.45□□□□□ -0.74
TRAPPC12-213ENST00000461577 XIAPP98170 497 aa10.45□□□□□ -0.74
TRAPPC12-213ENST00000461577 GPS1Q13098 491 aa10.45□□□□□ -0.74
TRAPPC12-213ENST00000461577 NFATC2Q13469 925 aa10.45□□□□□ -0.74
TRAPPC12-213ENST00000461577 HLTFQ14527 1009 aaKnown RBP eCLIP10.45□□□□□ -0.747e-7■■■□□ 15.5
TRAPPC12-213ENST00000461577 SKIDA1Q1XH10 827 aa10.45□□□□□ -0.74
TRAPPC12-213ENST00000461577 KHDC1Q4VXA5 237 aaKnown RBP10.45□□□□□ -0.74
TRAPPC12-213ENST00000461577 CCDC38Q502W7 563 aa10.45□□□□□ -0.74
TRAPPC12-213ENST00000461577 ZRANB3Q5FWF4 1079 aa10.45□□□□□ -0.74
TRAPPC12-213ENST00000461577 CERCAMQ5T4B2 595 aa10.45□□□□□ -0.74
TRAPPC12-213ENST00000461577 GPRC6AQ5T6X5 926 aa10.45□□□□□ -0.74
TRAPPC12-213ENST00000461577 SNX20Q7Z614 316 aa10.45□□□□□ -0.74
TRAPPC12-213ENST00000461577 MARCH9Q86YJ5 346 aa10.45□□□□□ -0.74
TRAPPC12-213ENST00000461577 SFTPA2Q8IWL1 248 aa10.45□□□□□ -0.74
TRAPPC12-213ENST00000461577 Q8N9G6 341 aaPredicted RBP10.45□□□□□ -0.74
TRAPPC12-213ENST00000461577 DDHD1Q8NEL9 900 aa10.45□□□□□ -0.74
TRAPPC12-213ENST00000461577 PPHLN1Q8NEY8 458 aaKnown RBP10.45□□□□□ -0.74
TRAPPC12-213ENST00000461577 WDR48Q8TAF3 677 aa10.45□□□□□ -0.74
TRAPPC12-213ENST00000461577 DCUN1D1Q96GG9 259 aa10.45□□□□□ -0.74
TRAPPC12-213ENST00000461577 CAPZA3Q96KX2 299 aa10.45□□□□□ -0.74
TRAPPC12-213ENST00000461577 DEPDC7Q96QD5 511 aa10.45□□□□□ -0.74
TRAPPC12-213ENST00000461577 OSGEPL1Q9H4B0 414 aa10.45□□□□□ -0.74
TRAPPC12-213ENST00000461577 FAM96AQ9H5X1 160 aa10.45□□□□□ -0.74
TRAPPC12-213ENST00000461577 KLC4Q9NSK0 619 aa10.45□□□□□ -0.74
TRAPPC12-213ENST00000461577 SMOXQ9NWM0 555 aa10.45□□□□□ -0.74
TRAPPC12-213ENST00000461577 LRIT1Q9P2V4 623 aa10.45□□□□□ -0.74
TRAPPC12-213ENST00000461577 ST14Q9Y5Y6 855 aa10.45□□□□□ -0.74
TRAPPC12-213ENST00000461577 SAR1BQ9Y6B6 198 aa10.45□□□□□ -0.74
TRAPPC12-213ENST00000461577 RNF215Q9Y6U7 377 aa10.45□□□□□ -0.74
TRAPPC12-213ENST00000461577 RP1P56715 2156 aa10.44□□□□□ -0.74
TRAPPC12-213ENST00000461577 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.44□□□□□ -0.74
TRAPPC12-213ENST00000461577 TRBV23OR9-2A0A075B6M9 112 aa10.44□□□□□ -0.74
TRAPPC12-213ENST00000461577 CFAP99D6REC4 459 aa10.44□□□□□ -0.74
TRAPPC12-213ENST00000461577 H7C0S8 307 aa10.44□□□□□ -0.74
TRAPPC12-213ENST00000461577 ZW10O43264 779 aa10.44□□□□□ -0.74
TRAPPC12-213ENST00000461577 NUDT21O43809 227 aaKnown RBP10.44□□□□□ -0.74
TRAPPC12-213ENST00000461577 PNLIPP16233 465 aa10.44□□□□□ -0.74
TRAPPC12-213ENST00000461577 ZNF7P17097 686 aaPredicted RBP10.44□□□□□ -0.74
TRAPPC12-213ENST00000461577 VCLP18206 1134 aa10.44□□□□□ -0.74
TRAPPC12-213ENST00000461577 TPSB2P20231 275 aa10.44□□□□□ -0.74
TRAPPC12-213ENST00000461577 ADRA1DP25100 572 aa10.44□□□□□ -0.74
TRAPPC12-213ENST00000461577 CA5AP35218 305 aa10.44□□□□□ -0.74
TRAPPC12-213ENST00000461577 PAFAH1B1P43034 410 aa10.44□□□□□ -0.74
TRAPPC12-213ENST00000461577 CLCNKAP51800 687 aa10.44□□□□□ -0.74
TRAPPC12-213ENST00000461577 SESN2P58004 480 aaPredicted RBP10.44□□□□□ -0.74
TRAPPC12-213ENST00000461577 CCL7P80098 99 aa10.44□□□□□ -0.74
TRAPPC12-213ENST00000461577 CDK16Q00536 496 aa10.44□□□□□ -0.74
TRAPPC12-213ENST00000461577 TARDBPQ13148 414 aaKnown RBP eCLIP10.44□□□□□ -0.74
TRAPPC12-213ENST00000461577 SPIDRQ14159 915 aa10.44□□□□□ -0.74
TRAPPC12-213ENST00000461577 PPP1R7Q15435 360 aa10.44□□□□□ -0.74
TRAPPC12-213ENST00000461577 TPSAB1Q15661 275 aa10.44□□□□□ -0.74
TRAPPC12-213ENST00000461577 GPR33Q49SQ1 333 aa10.44□□□□□ -0.74
TRAPPC12-213ENST00000461577 PAPD7Q5XG87 772 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms