RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 ZNF487B1APH4 448 aa14.35□□□□□ -0.11
DNMT3A-207ENST00000461228 INPP4BO15327 924 aa14.35□□□□□ -0.11
DNMT3A-207ENST00000461228 UBXN7O94888 489 aa14.35□□□□□ -0.11
DNMT3A-207ENST00000461228 ASMTLO95671 621 aa14.35□□□□□ -0.11
DNMT3A-207ENST00000461228 ATP1A1P05023 1023 aaKnown RBP14.35□□□□□ -0.11
DNMT3A-207ENST00000461228 DLSTP36957 453 aa14.35□□□□□ -0.11
DNMT3A-207ENST00000461228 IGFBP7Q16270 282 aa14.35□□□□□ -0.11
DNMT3A-207ENST00000461228 ABRAXAS1Q6UWZ7 409 aa14.35□□□□□ -0.11
DNMT3A-207ENST00000461228 VSIG1Q86XK7 387 aa14.35□□□□□ -0.11
DNMT3A-207ENST00000461228 KMT5CQ86Y97 462 aa14.35□□□□□ -0.11
DNMT3A-207ENST00000461228 UNC5BQ8IZJ1 945 aa14.35□□□□□ -0.11
DNMT3A-207ENST00000461228 CARFQ8N187 725 aa14.35□□□□□ -0.11
DNMT3A-207ENST00000461228 DTX3LQ8TDB6 740 aa14.35□□□□□ -0.11
DNMT3A-207ENST00000461228 THAP4Q8WY91 577 aa14.35□□□□□ -0.11
DNMT3A-207ENST00000461228 HSPH1Q92598 858 aa14.35□□□□□ -0.11
DNMT3A-207ENST00000461228 PLEKHG4BQ96PX9 1271 aa14.35□□□□□ -0.11
DNMT3A-207ENST00000461228 ADGRE3Q9BY15 652 aa14.35□□□□□ -0.11
DNMT3A-207ENST00000461228 MLXIPLQ9NP71 852 aa14.35□□□□□ -0.11
DNMT3A-207ENST00000461228 IP6K2Q9UHH9 426 aa14.35□□□□□ -0.11
DNMT3A-207ENST00000461228 PLAAQ9Y263 795 aa14.35□□□□□ -0.11
DNMT3A-207ENST00000461228 TMCO5BA8MYB1 307 aa14.34□□□□□ -0.11
DNMT3A-207ENST00000461228 ANKRD66B4E2M5 251 aa14.34□□□□□ -0.11
DNMT3A-207ENST00000461228 CREG1O75629 220 aa14.34□□□□□ -0.11
DNMT3A-207ENST00000461228 NDUFA10O95299 355 aa14.34□□□□□ -0.11
DNMT3A-207ENST00000461228 TCF4P15884 667 aa14.34□□□□□ -0.11
DNMT3A-207ENST00000461228 F8A1P23610 371 aa14.34□□□□□ -0.11
DNMT3A-207ENST00000461228 IL4RP24394 825 aa14.34□□□□□ -0.11
DNMT3A-207ENST00000461228 ARSEP51690 589 aa14.34□□□□□ -0.11
DNMT3A-207ENST00000461228 GFERP55789 205 aa14.34□□□□□ -0.11
DNMT3A-207ENST00000461228 DSC2Q02487 901 aa14.34□□□□□ -0.11
DNMT3A-207ENST00000461228 IHHQ14623 411 aa14.34□□□□□ -0.11
DNMT3A-207ENST00000461228 SNAP47Q5SQN1 464 aa14.34□□□□□ -0.11
DNMT3A-207ENST00000461228 E4F1Q66K89 784 aaPredicted RBP14.34□□□□□ -0.11
DNMT3A-207ENST00000461228 ASB18Q6ZVZ8 466 aa14.34□□□□□ -0.11
DNMT3A-207ENST00000461228 PPP1R3BQ86XI6 285 aa14.34□□□□□ -0.11
DNMT3A-207ENST00000461228 TRAM1L1Q8N609 369 aa14.34□□□□□ -0.11
DNMT3A-207ENST00000461228 TEX19Q8NA77 164 aa14.34□□□□□ -0.11
DNMT3A-207ENST00000461228 UBXN4Q92575 508 aa14.34□□□□□ -0.11
DNMT3A-207ENST00000461228 ZDHHC12Q96GR4 267 aa14.34□□□□□ -0.11
DNMT3A-207ENST00000461228 SLC41A2Q96JW4 573 aa14.34□□□□□ -0.11
DNMT3A-207ENST00000461228 VPS35Q96QK1 796 aa14.34□□□□□ -0.11
DNMT3A-207ENST00000461228 SRPK1Q96SB4 655 aaKnown RBP14.34□□□□□ -0.11
DNMT3A-207ENST00000461228 CD180Q99467 661 aa14.34□□□□□ -0.11
DNMT3A-207ENST00000461228 BPIFA3Q9BQP9 254 aa14.34□□□□□ -0.11
DNMT3A-207ENST00000461228 TBC1D10AQ9BXI6 508 aa14.34□□□□□ -0.11
DNMT3A-207ENST00000461228 GPR87Q9BY21 358 aa14.34□□□□□ -0.11
DNMT3A-207ENST00000461228 TRIM39Q9HCM9 518 aa14.34□□□□□ -0.11
DNMT3A-207ENST00000461228 RTN4Q9NQC3 1192 aaKnown RBP14.34□□□□□ -0.11
DNMT3A-207ENST00000461228 BZW2Q9Y6E2 419 aaKnown RBP14.34□□□□□ -0.11
DNMT3A-207ENST00000461228 CRYBG3Q68DQ2 2970 aa14.34□□□□□ -0.11
DNMT3A-207ENST00000461228 A8MU76 341 aa14.33□□□□□ -0.12
DNMT3A-207ENST00000461228 KMOO15229 486 aa14.33□□□□□ -0.12
DNMT3A-207ENST00000461228 KCNJ13O60928 360 aa14.33□□□□□ -0.12
DNMT3A-207ENST00000461228 SORBS2O94875 1100 aaKnown RBP14.33□□□□□ -0.12
DNMT3A-207ENST00000461228 CLDN7O95471 211 aa14.33□□□□□ -0.12
DNMT3A-207ENST00000461228 NELFEP18615 380 aaKnown RBP14.33□□□□□ -0.12
DNMT3A-207ENST00000461228 CDK11BP21127 795 aaKnown RBP14.33□□□□□ -0.12
DNMT3A-207ENST00000461228 VARSP26640 1264 aaKnown RBP14.33□□□□□ -0.12
DNMT3A-207ENST00000461228 IFI35P80217 286 aaPredicted RBP14.33□□□□□ -0.12
DNMT3A-207ENST00000461228 DMPKQ09013 629 aa14.33□□□□□ -0.12
DNMT3A-207ENST00000461228 KLHL30Q0D2K2 578 aa14.33□□□□□ -0.12
DNMT3A-207ENST00000461228 SEMA5AQ13591 1074 aa14.33□□□□□ -0.12
DNMT3A-207ENST00000461228 DNASE1L3Q13609 305 aa14.33□□□□□ -0.12
DNMT3A-207ENST00000461228 DPYSL3Q14195 570 aa14.33□□□□□ -0.12
DNMT3A-207ENST00000461228 KRT81Q14533 505 aa14.33□□□□□ -0.12
DNMT3A-207ENST00000461228 PDK2Q15119 407 aa14.33□□□□□ -0.12
DNMT3A-207ENST00000461228 PTPRRQ15256 657 aa14.33□□□□□ -0.12
DNMT3A-207ENST00000461228 UGT8Q16880 541 aa14.33□□□□□ -0.12
DNMT3A-207ENST00000461228 CAPRIN2Q6IMN6 1127 aaKnown RBP14.33□□□□□ -0.12
DNMT3A-207ENST00000461228 SASS6Q6UVJ0 657 aa14.33□□□□□ -0.12
DNMT3A-207ENST00000461228 ZNF517Q6ZMY9 492 aaPredicted RBP14.33□□□□□ -0.12
DNMT3A-207ENST00000461228 LPCAT1Q8NF37 534 aa14.33□□□□□ -0.12
DNMT3A-207ENST00000461228 SYN2Q92777 582 aaPredicted RBP14.33□□□□□ -0.12
DNMT3A-207ENST00000461228 GLYATL1Q969I3 302 aa14.33□□□□□ -0.12
DNMT3A-207ENST00000461228 NUP85Q9BW27 656 aa14.33□□□□□ -0.12
DNMT3A-207ENST00000461228 SLC40A1Q9NP59 571 aa14.33□□□□□ -0.12
DNMT3A-207ENST00000461228 LMBRD1Q9NUN5 540 aa14.33□□□□□ -0.12
DNMT3A-207ENST00000461228 ATXN10Q9UBB4 475 aa14.33□□□□□ -0.12
DNMT3A-207ENST00000461228 CHKBQ9Y259 395 aa14.33□□□□□ -0.12
DNMT3A-207ENST00000461228 LRBAP50851 2863 aa14.33□□□□□ -0.12
DNMT3A-207ENST00000461228 CREBBPQ92793 2442 aa14.33□□□□□ -0.12
DNMT3A-207ENST00000461228 VIPP01282 170 aa14.32□□□□□ -0.12
DNMT3A-207ENST00000461228 HLA-DQB2P05538 268 aa14.32□□□□□ -0.12
DNMT3A-207ENST00000461228 CCNYL3P0C7X3 344 aa14.32□□□□□ -0.12
DNMT3A-207ENST00000461228 ZNF28P17035 718 aa14.32□□□□□ -0.12
DNMT3A-207ENST00000461228 ZNF8P17098 575 aaPredicted RBP14.32□□□□□ -0.12
DNMT3A-207ENST00000461228 PPM1FP49593 454 aaPredicted RBP14.32□□□□□ -0.12
DNMT3A-207ENST00000461228 FOXM1Q08050 763 aa14.32□□□□□ -0.12
DNMT3A-207ENST00000461228 LAMB3Q13751 1172 aa14.32□□□□□ -0.12
DNMT3A-207ENST00000461228 QPCTQ16769 361 aa14.32□□□□□ -0.12
DNMT3A-207ENST00000461228 HADHQ16836 314 aaKnown RBP14.32□□□□□ -0.12
DNMT3A-207ENST00000461228 ATP1A1-AS1Q5TC04 95 aa14.32□□□□□ -0.12
DNMT3A-207ENST00000461228 TXNRD3NBQ6F5E7 133 aa14.32□□□□□ -0.12
DNMT3A-207ENST00000461228 C16orf46Q6P387 395 aa14.32□□□□□ -0.12
DNMT3A-207ENST00000461228 SYVN1Q86TM6 617 aa14.32□□□□□ -0.12
DNMT3A-207ENST00000461228 LRRTM4Q86VH4 590 aa14.32□□□□□ -0.12
DNMT3A-207ENST00000461228 TRIM48Q8IWZ4 208 aa14.32□□□□□ -0.12
DNMT3A-207ENST00000461228 GALNT6Q8NCL4 622 aa14.32□□□□□ -0.12
DNMT3A-207ENST00000461228 OR8K5Q8NH50 307 aa14.32□□□□□ -0.12
DNMT3A-207ENST00000461228 IQCDQ96DY2 449 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms