RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 DNAJC24Q6P3W2 148 aa17■□□□□ 0.31
TOP3A-202ENST00000461127 ARHGAP36Q6ZRI8 547 aa17■□□□□ 0.31
TOP3A-202ENST00000461127 SYVN1Q86TM6 617 aa17■□□□□ 0.31
TOP3A-202ENST00000461127 PHYKPLQ8IUZ5 450 aa17■□□□□ 0.31
TOP3A-202ENST00000461127 CNGA4Q8IV77 575 aa17■□□□□ 0.31
TOP3A-202ENST00000461127 TP53INP2Q8IXH6 220 aa17■□□□□ 0.31
TOP3A-202ENST00000461127 BBS5Q8N3I7 341 aa17■□□□□ 0.31
TOP3A-202ENST00000461127 SCAMP4Q969E2 229 aa17■□□□□ 0.31
TOP3A-202ENST00000461127 COX14Q96I36 57 aa17■□□□□ 0.31
TOP3A-202ENST00000461127 MCCC1Q96RQ3 725 aaPredicted RBP17■□□□□ 0.31
TOP3A-202ENST00000461127 NUDCD1Q96RS6 583 aa17■□□□□ 0.31
TOP3A-202ENST00000461127 GANQ9H2C0 597 aa17■□□□□ 0.31
TOP3A-202ENST00000461127 RMI1Q9H9A7 625 aa17■□□□□ 0.31
TOP3A-202ENST00000461127 UCK1Q9HA47 277 aa17■□□□□ 0.31
TOP3A-202ENST00000461127 PDE7BQ9NP56 450 aa17■□□□□ 0.31
TOP3A-202ENST00000461127 LUZP4Q9P127 313 aa17■□□□□ 0.31
TOP3A-202ENST00000461127 CAPN11Q9UMQ6 739 aa17■□□□□ 0.31
TOP3A-202ENST00000461127 AP4E1Q9UPM8 1137 aa17■□□□□ 0.31
TOP3A-202ENST00000461127 PRKAB1Q9Y478 270 aa17■□□□□ 0.31
TOP3A-202ENST00000461127 EPHB6O15197 1021 aa16.99■□□□□ 0.31
TOP3A-202ENST00000461127 DNAJC6O75061 913 aa16.99■□□□□ 0.31
TOP3A-202ENST00000461127 PGLSO95336 258 aa16.99■□□□□ 0.31
TOP3A-202ENST00000461127 TYRP1P17643 537 aa16.99■□□□□ 0.31
TOP3A-202ENST00000461127 CTPS1P17812 591 aa16.99■□□□□ 0.31
TOP3A-202ENST00000461127 PTPN4P29074 926 aa16.99■□□□□ 0.31
TOP3A-202ENST00000461127 PTP4A2Q12974 167 aa16.99■□□□□ 0.31
TOP3A-202ENST00000461127 ZRANB3Q5FWF4 1079 aa16.99■□□□□ 0.31
TOP3A-202ENST00000461127 LRRC66Q68CR7 880 aa16.99■□□□□ 0.31
TOP3A-202ENST00000461127 ARHGAP12Q8IWW6 846 aa16.99■□□□□ 0.31
TOP3A-202ENST00000461127 TRIM48Q8IWZ4 208 aa16.99■□□□□ 0.31
TOP3A-202ENST00000461127 RHOT1Q8IXI2 618 aa16.99■□□□□ 0.31
TOP3A-202ENST00000461127 PNPLA2Q96AD5 504 aa16.99■□□□□ 0.31
TOP3A-202ENST00000461127 MCEEQ96PE7 176 aa16.99■□□□□ 0.31
TOP3A-202ENST00000461127 MFRPQ9BY79 579 aa16.99■□□□□ 0.31
TOP3A-202ENST00000461127 DHX35Q9H5Z1 703 aaKnown RBP16.99■□□□□ 0.31
TOP3A-202ENST00000461127 NOD2Q9HC29 1040 aa16.99■□□□□ 0.31
TOP3A-202ENST00000461127 NLRC4Q9NPP4 1024 aa16.99■□□□□ 0.31
TOP3A-202ENST00000461127 CSMD1Q96PZ7 3565 aa16.98■□□□□ 0.31
TOP3A-202ENST00000461127 VIPP01282 170 aa16.98■□□□□ 0.31
TOP3A-202ENST00000461127 ATP1A1P05023 1023 aaKnown RBP16.98■□□□□ 0.31
TOP3A-202ENST00000461127 UNGP13051 313 aaPredicted RBP16.98■□□□□ 0.31
TOP3A-202ENST00000461127 ZNF30P17039 623 aa16.98■□□□□ 0.31
TOP3A-202ENST00000461127 CHRNB2P17787 502 aa16.98■□□□□ 0.31
TOP3A-202ENST00000461127 ERCC2P18074 760 aa16.98■□□□□ 0.31
TOP3A-202ENST00000461127 TNFAIP3P21580 790 aa16.98■□□□□ 0.31
TOP3A-202ENST00000461127 ZBED6P86452 979 aa16.98■□□□□ 0.31
TOP3A-202ENST00000461127 PDE1BQ01064 536 aa16.98■□□□□ 0.31
TOP3A-202ENST00000461127 TRAF2Q12933 501 aa16.98■□□□□ 0.31
TOP3A-202ENST00000461127 ELOAQ14241 798 aaKnown RBP16.98■□□□□ 0.31
TOP3A-202ENST00000461127 NR6A1Q15406 480 aa16.98■□□□□ 0.31
TOP3A-202ENST00000461127 RALGPS1Q5JS13 557 aa16.98■□□□□ 0.31
TOP3A-202ENST00000461127 CACHD1Q5VU97 1274 aa16.98■□□□□ 0.31
TOP3A-202ENST00000461127 SLC6A19Q695T7 634 aa16.98■□□□□ 0.31
TOP3A-202ENST00000461127 RFLNAQ6ZTI6 216 aa16.98■□□□□ 0.31
TOP3A-202ENST00000461127 TMEM26Q6ZUK4 368 aa16.98■□□□□ 0.31
TOP3A-202ENST00000461127 RFX8Q6ZV50 586 aa16.98■□□□□ 0.31
TOP3A-202ENST00000461127 PRSS42Q7Z5A4 293 aa16.98■□□□□ 0.31
TOP3A-202ENST00000461127 PHF13Q86YI8 300 aaPredicted RBP16.98■□□□□ 0.31
TOP3A-202ENST00000461127 Q8NA96 180 aa16.98■□□□□ 0.31
TOP3A-202ENST00000461127 FCRL4Q96PJ5 515 aa16.98■□□□□ 0.31
TOP3A-202ENST00000461127 GPATCH2LQ9NWQ4 482 aa16.98■□□□□ 0.31
TOP3A-202ENST00000461127 OGFRQ9NZT2 677 aa16.98■□□□□ 0.31
TOP3A-202ENST00000461127 PPIL1Q9Y3C6 166 aa16.98■□□□□ 0.31
TOP3A-202ENST00000461127 HNRNPRO43390 633 aaKnown RBP16.97■□□□□ 0.31
TOP3A-202ENST00000461127 MFAP3LO75121 409 aa16.97■□□□□ 0.31
TOP3A-202ENST00000461127 RPS18P62269 152 aaKnown RBP16.97■□□□□ 0.31
TOP3A-202ENST00000461127 UBE2IP63279 158 aaKnown RBP16.97■□□□□ 0.31
TOP3A-202ENST00000461127 PTPRRQ15256 657 aa16.97■□□□□ 0.31
TOP3A-202ENST00000461127 DCUN1D2Q6PH85 259 aa16.97■□□□□ 0.31
TOP3A-202ENST00000461127 NSMCE1Q8WV22 266 aa16.97■□□□□ 0.31
TOP3A-202ENST00000461127 ZDHHC12Q96GR4 267 aa16.97■□□□□ 0.31
TOP3A-202ENST00000461127 PLEKHG4BQ96PX9 1271 aa16.97■□□□□ 0.31
TOP3A-202ENST00000461127 AGAP2Q99490 1192 aa16.97■□□□□ 0.31
TOP3A-202ENST00000461127 RIOK2Q9BVS4 552 aaKnown RBP16.97■□□□□ 0.31
TOP3A-202ENST00000461127 RARRES3Q9UL19 164 aa16.97■□□□□ 0.31
TOP3A-202ENST00000461127 DNPEPQ9ULA0 475 aa16.97■□□□□ 0.31
TOP3A-202ENST00000461127 OTOGQ6ZRI0 2925 aa16.97■□□□□ 0.31
TOP3A-202ENST00000461127 XRCC1P18887 633 aaPredicted RBP16.96■□□□□ 0.31
TOP3A-202ENST00000461127 DEKP35659 375 aaKnown RBP16.96■□□□□ 0.31
TOP3A-202ENST00000461127 RPL7AP62424 266 aaKnown RBP16.96■□□□□ 0.31
TOP3A-202ENST00000461127 PTSQ03393 145 aa16.96■□□□□ 0.31
TOP3A-202ENST00000461127 CLEC16AQ2KHT3 1053 aa16.96■□□□□ 0.31
TOP3A-202ENST00000461127 PPP1R15BQ5SWA1 713 aa16.96■□□□□ 0.31
TOP3A-202ENST00000461127 ERMARDQ5T6L9 678 aa16.96■□□□□ 0.31
TOP3A-202ENST00000461127 BPHLQ86WA6 291 aaPredicted RBP16.96■□□□□ 0.31
TOP3A-202ENST00000461127 IQCKQ8N0W5 287 aa16.96■□□□□ 0.31
TOP3A-202ENST00000461127 NPWQ8N729 165 aa16.96■□□□□ 0.31
TOP3A-202ENST00000461127 OR8K1Q8NGG5 319 aa16.96■□□□□ 0.31
TOP3A-202ENST00000461127 KLHL6Q8WZ60 621 aa16.96■□□□□ 0.31
TOP3A-202ENST00000461127 MARVELD3Q96A59 401 aa16.96■□□□□ 0.31
TOP3A-202ENST00000461127 MGME1Q9BQP7 344 aa16.96■□□□□ 0.31
TOP3A-202ENST00000461127 OSGEPL1Q9H4B0 414 aa16.96■□□□□ 0.31
TOP3A-202ENST00000461127 ZNHIT6Q9NWK9 470 aaKnown RBP16.96■□□□□ 0.31
TOP3A-202ENST00000461127 MYO6Q9UM54 1294 aa16.96■□□□□ 0.31
TOP3A-202ENST00000461127 FARSAQ9Y285 508 aaKnown RBP16.96■□□□□ 0.31
TOP3A-202ENST00000461127 PCYT1BQ9Y5K3 369 aaPredicted RBP16.96■□□□□ 0.31
TOP3A-202ENST00000461127 SLC30A1Q9Y6M5 507 aa16.96■□□□□ 0.31
TOP3A-202ENST00000461127 F8P00451 2351 aa16.95■□□□□ 0.3
TOP3A-202ENST00000461127 A0A0U1RQS6 177 aa16.95■□□□□ 0.3
TOP3A-202ENST00000461127 SSU72P8A0A1W2PR75 194 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms