RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 C1orf74Q96LT6 269 aa2.9□□□□□ -1.95
SCARNA18-201ENST00000459004 LRMDAQ9H2I8 198 aa2.9□□□□□ -1.95
SCARNA18-201ENST00000459004 PIGMQ9H3S5 423 aa2.9□□□□□ -1.95
SCARNA18-201ENST00000459004 ZHX3Q9H4I2 956 aa2.9□□□□□ -1.95
SCARNA18-201ENST00000459004 EPB41L5Q9HCM4 733 aa2.9□□□□□ -1.95
SCARNA18-201ENST00000459004 SDF2L1Q9HCN8 221 aa2.9□□□□□ -1.95
SCARNA18-201ENST00000459004 SMC4Q9NTJ3 1288 aa2.9□□□□□ -1.95
SCARNA18-201ENST00000459004 ZFP57Q9NU63 452 aa2.9□□□□□ -1.95
SCARNA18-201ENST00000459004 TCP11L1Q9NUJ3 509 aa2.9□□□□□ -1.95
SCARNA18-201ENST00000459004 HCFC1R1Q9NWW0 138 aa2.9□□□□□ -1.95
SCARNA18-201ENST00000459004 POLG2Q9UHN1 485 aa2.9□□□□□ -1.95
SCARNA18-201ENST00000459004 CORO1CQ9ULV4 474 aaPredicted RBP2.9□□□□□ -1.95
SCARNA18-201ENST00000459004 LYVE1Q9Y5Y7 322 aa2.9□□□□□ -1.95
SCARNA18-201ENST00000459004 PRAG1Q86YV5 1406 aa2.9□□□□□ -1.95
SCARNA18-201ENST00000459004 TNFSF12-TNFSF13A0A0A6YY99 330 aa2.89□□□□□ -1.95
SCARNA18-201ENST00000459004 ZCWPW2A0A1B0GU75 182 aa2.89□□□□□ -1.95
SCARNA18-201ENST00000459004 A0A1W2PP11 408 aa2.89□□□□□ -1.95
SCARNA18-201ENST00000459004 PI4KAP2A4QPH2 592 aa2.89□□□□□ -1.95
SCARNA18-201ENST00000459004 OR5K3A6NET4 321 aa2.89□□□□□ -1.95
SCARNA18-201ENST00000459004 LINC01565O15544 149 aa2.89□□□□□ -1.95
SCARNA18-201ENST00000459004 GRID2O43424 1007 aa2.89□□□□□ -1.95
SCARNA18-201ENST00000459004 BUD23O43709 281 aaKnown RBP2.89□□□□□ -1.95
SCARNA18-201ENST00000459004 GPC4O75487 556 aa2.89□□□□□ -1.95
SCARNA18-201ENST00000459004 ACTN1P12814 892 aa2.89□□□□□ -1.95
SCARNA18-201ENST00000459004 MARK3P27448 753 aa2.89□□□□□ -1.95
SCARNA18-201ENST00000459004 PPARGP37231 505 aaPredicted RBP2.89□□□□□ -1.95
SCARNA18-201ENST00000459004 ARCN1P48444 511 aaKnown RBP2.89□□□□□ -1.95
SCARNA18-201ENST00000459004 HOXA1P49639 335 aaPredicted RBP2.89□□□□□ -1.95
SCARNA18-201ENST00000459004 COG7P83436 770 aa2.89□□□□□ -1.95
SCARNA18-201ENST00000459004 CRYMQ14894 314 aa2.89□□□□□ -1.95
SCARNA18-201ENST00000459004 PCGF3Q3KNV8 242 aa2.89□□□□□ -1.95
SCARNA18-201ENST00000459004 KRTAP24-1Q3LI83 254 aa2.89□□□□□ -1.95
SCARNA18-201ENST00000459004 STXBP5Q5T5C0 1151 aa2.89□□□□□ -1.95
SCARNA18-201ENST00000459004 GFI1BQ5VTD9 330 aa2.89□□□□□ -1.95
SCARNA18-201ENST00000459004 ACSM2BQ68CK6 577 aa2.89□□□□□ -1.95
SCARNA18-201ENST00000459004 PMS2CLQ68D20 193 aa2.89□□□□□ -1.95
SCARNA18-201ENST00000459004 JADE1Q6IE81 842 aa2.89□□□□□ -1.95
SCARNA18-201ENST00000459004 OR7E24Q6IFN5 339 aa2.89□□□□□ -1.95
SCARNA18-201ENST00000459004 FAM171BQ6P995 826 aa2.89□□□□□ -1.95
SCARNA18-201ENST00000459004 C19orf48Q6RUI8 117 aa2.89□□□□□ -1.95
SCARNA18-201ENST00000459004 ZNF852Q6ZMS4 543 aa2.89□□□□□ -1.95
SCARNA18-201ENST00000459004 MEX3BQ6ZN04 569 aaKnown RBP2.89□□□□□ -1.95
SCARNA18-201ENST00000459004 IKBIPQ70UQ0 350 aa2.89□□□□□ -1.95
SCARNA18-201ENST00000459004 MAATS1Q7Z4T9 603 aa2.89□□□□□ -1.95
SCARNA18-201ENST00000459004 ZNF329Q86UD4 541 aa2.89□□□□□ -1.95
SCARNA18-201ENST00000459004 TICAM1Q8IUC6 712 aa2.89□□□□□ -1.95
SCARNA18-201ENST00000459004 CIARTQ8N365 385 aaPredicted RBP2.89□□□□□ -1.95
SCARNA18-201ENST00000459004 SLC38A9Q8NBW4 561 aa2.89□□□□□ -1.95
SCARNA18-201ENST00000459004 TRPC4APQ8TEL6 797 aa2.89□□□□□ -1.95
SCARNA18-201ENST00000459004 SLC38A5Q8WUX1 472 aa2.89□□□□□ -1.95
SCARNA18-201ENST00000459004 TMEM255BQ8WV15 326 aa2.89□□□□□ -1.95
SCARNA18-201ENST00000459004 SLC44A1Q8WWI5 657 aa2.89□□□□□ -1.95
SCARNA18-201ENST00000459004 USP6NLQ92738 828 aa2.89□□□□□ -1.95
SCARNA18-201ENST00000459004 EVI5LQ96CN4 794 aa2.89□□□□□ -1.95
SCARNA18-201ENST00000459004 CMTM3Q96MX0 182 aa2.89□□□□□ -1.95
SCARNA18-201ENST00000459004 SEMA3CQ99985 751 aa2.89□□□□□ -1.95
SCARNA18-201ENST00000459004 POLR3CQ9BUI4 534 aaPredicted RBP2.89□□□□□ -1.95
SCARNA18-201ENST00000459004 ITPAQ9BY32 194 aa2.89□□□□□ -1.95
SCARNA18-201ENST00000459004 SH2D4AQ9H788 454 aa2.89□□□□□ -1.95
SCARNA18-201ENST00000459004 KAT14Q9H8E8 782 aa2.89□□□□□ -1.95
SCARNA18-201ENST00000459004 ZNF334Q9HCZ1 680 aaPredicted RBP2.89□□□□□ -1.95
SCARNA18-201ENST00000459004 KRT84Q9NSB2 600 aa2.89□□□□□ -1.95
SCARNA18-201ENST00000459004 FAM118AQ9NWS6 357 aa2.89□□□□□ -1.95
SCARNA18-201ENST00000459004 ITIH6Q6UXX5 1313 aa2.89□□□□□ -1.95
SCARNA18-201ENST00000459004 NOTCH4Q99466 2003 aa2.88□□□□□ -1.95
SCARNA18-201ENST00000459004 FRMD3A2A2Y4 597 aa2.88□□□□□ -1.95
SCARNA18-201ENST00000459004 PGPEP1LA6NFU8 196 aa2.88□□□□□ -1.95
SCARNA18-201ENST00000459004 A8MZ25 164 aa2.88□□□□□ -1.95
SCARNA18-201ENST00000459004 MYO1GB0I1T2 1018 aa2.88□□□□□ -1.95
SCARNA18-201ENST00000459004 ANKRD66B4E2M5 251 aa2.88□□□□□ -1.95
SCARNA18-201ENST00000459004 DVL1O14640 695 aa2.88□□□□□ -1.95
SCARNA18-201ENST00000459004 MAP2K7O14733 419 aa2.88□□□□□ -1.95
SCARNA18-201ENST00000459004 SMAD9O15198 467 aaKnown RBP2.88□□□□□ -1.95
SCARNA18-201ENST00000459004 EIF3DO15371 548 aaKnown RBP eCLIP2.88□□□□□ -1.95
SCARNA18-201ENST00000459004 SYNGR3O43761 229 aa2.88□□□□□ -1.95
SCARNA18-201ENST00000459004 TMCC2O75069 709 aa2.88□□□□□ -1.95
SCARNA18-201ENST00000459004 KCNK5O95279 499 aa2.88□□□□□ -1.95
SCARNA18-201ENST00000459004 ACADMP11310 421 aa2.88□□□□□ -1.95
SCARNA18-201ENST00000459004 GM2AP17900 193 aa2.88□□□□□ -1.95
SCARNA18-201ENST00000459004 ANXA7P20073 488 aaKnown RBP2.88□□□□□ -1.95
SCARNA18-201ENST00000459004 ACADLP28330 430 aa2.88□□□□□ -1.95
SCARNA18-201ENST00000459004 HOXA13P31271 388 aaPredicted RBP2.88□□□□□ -1.95
SCARNA18-201ENST00000459004 AHRP35869 848 aa2.88□□□□□ -1.95
SCARNA18-201ENST00000459004 DVL1P1P54792 670 aaPredicted RBP2.88□□□□□ -1.95
SCARNA18-201ENST00000459004 MLLT10P55197 1068 aa2.88□□□□□ -1.95
SCARNA18-201ENST00000459004 DCAF7P61962 342 aa2.88□□□□□ -1.95
SCARNA18-201ENST00000459004 RPL24P83731 157 aaKnown RBP2.88□□□□□ -1.95
SCARNA18-201ENST00000459004 GKAP1Q5VSY0 366 aaPredicted RBP2.88□□□□□ -1.95
SCARNA18-201ENST00000459004 FAM180BQ6P0A1 224 aa2.88□□□□□ -1.95
SCARNA18-201ENST00000459004 TMEM154Q6P9G4 183 aa2.88□□□□□ -1.95
SCARNA18-201ENST00000459004 SLC26A9Q7LBE3 791 aa2.88□□□□□ -1.95
SCARNA18-201ENST00000459004 ATG9AQ7Z3C6 839 aa2.88□□□□□ -1.95
SCARNA18-201ENST00000459004 CCDC190Q86UF4 302 aa2.88□□□□□ -1.95
SCARNA18-201ENST00000459004 PM20D2Q8IYS1 436 aa2.88□□□□□ -1.95
SCARNA18-201ENST00000459004 TMTC2Q8N394 836 aa2.88□□□□□ -1.95
SCARNA18-201ENST00000459004 GCSAMQ8N6F7 178 aa2.88□□□□□ -1.95
SCARNA18-201ENST00000459004 HJURPQ8NCD3 748 aaPredicted RBP2.88□□□□□ -1.95
SCARNA18-201ENST00000459004 SLC24A4Q8NFF2 622 aa2.88□□□□□ -1.95
SCARNA18-201ENST00000459004 RDM1Q8NG50 284 aa2.88□□□□□ -1.95
SCARNA18-201ENST00000459004 OR52I2Q8NH67 350 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms