RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 PPM1NQ8N819 430 aa11.14□□□□□ -0.63
TRAF4-206ENST00000454852 MFSD2AQ8NA29 543 aa11.14□□□□□ -0.63
TRAF4-206ENST00000454852 DCAKDQ8WVC6 231 aa11.14□□□□□ -0.63
TRAF4-206ENST00000454852 KLK6Q92876 244 aa11.14□□□□□ -0.63
TRAF4-206ENST00000454852 ISL2Q96A47 359 aa11.14□□□□□ -0.63
TRAF4-206ENST00000454852 FUBP1Q96AE4 644 aaKnown RBP11.14□□□□□ -0.63
TRAF4-206ENST00000454852 SCARF2Q96GP6 870 aaPredicted RBP11.14□□□□□ -0.63
TRAF4-206ENST00000454852 ZNF514Q96K75 400 aaPredicted RBP11.14□□□□□ -0.63
TRAF4-206ENST00000454852 HSPA12BQ96MM6 686 aa11.14□□□□□ -0.63
TRAF4-206ENST00000454852 RBBP8Q99708 897 aa11.14□□□□□ -0.63
TRAF4-206ENST00000454852 APOOQ9BUR5 198 aa11.14□□□□□ -0.63
TRAF4-206ENST00000454852 ZCCHC2Q9C0B9 1178 aaKnown RBP11.14□□□□□ -0.63
TRAF4-206ENST00000454852 RMI1Q9H9A7 625 aa11.14□□□□□ -0.63
TRAF4-206ENST00000454852 PHPT1Q9NRX4 125 aaPredicted RBP11.14□□□□□ -0.63
TRAF4-206ENST00000454852 PLAAQ9Y263 795 aa11.14□□□□□ -0.63
TRAF4-206ENST00000454852 INVSQ9Y283 1065 aa11.14□□□□□ -0.63
TRAF4-206ENST00000454852 SLC17A4Q9Y2C5 497 aa11.14□□□□□ -0.63
TRAF4-206ENST00000454852 PCDHB1Q9Y5F3 818 aa11.14□□□□□ -0.63
TRAF4-206ENST00000454852 BPTFQ12830 3046 aa11.14□□□□□ -0.63
TRAF4-206ENST00000454852 A0A1W2PR77 199 aa11.13□□□□□ -0.63
TRAF4-206ENST00000454852 POM121BA6NF01 834 aa11.13□□□□□ -0.63
TRAF4-206ENST00000454852 A6NNZ2 444 aa11.13□□□□□ -0.63
TRAF4-206ENST00000454852 CFAP99D6REC4 459 aa11.13□□□□□ -0.63
TRAF4-206ENST00000454852 H3BMM5 538 aa11.13□□□□□ -0.63
TRAF4-206ENST00000454852 TNFRSF10CO14798 259 aa11.13□□□□□ -0.63
TRAF4-206ENST00000454852 CHUKO15111 745 aa11.13□□□□□ -0.63
TRAF4-206ENST00000454852 SGTAO43765 313 aa11.13□□□□□ -0.63
TRAF4-206ENST00000454852 CDH16O75309 829 aa11.13□□□□□ -0.63
TRAF4-206ENST00000454852 NDUFS3O75489 264 aa11.13□□□□□ -0.63
TRAF4-206ENST00000454852 RHOBTB1O94844 696 aa11.13□□□□□ -0.63
TRAF4-206ENST00000454852 HAUS5O94927 633 aa11.13□□□□□ -0.63
TRAF4-206ENST00000454852 SLC25A14O95258 325 aaPredicted RBP11.13□□□□□ -0.63
TRAF4-206ENST00000454852 PCCBP05166 539 aa11.13□□□□□ -0.63
TRAF4-206ENST00000454852 GSTM1P09488 218 aa11.13□□□□□ -0.63
TRAF4-206ENST00000454852 RALBP11234 206 aa11.13□□□□□ -0.63
TRAF4-206ENST00000454852 KELP23276 732 aa11.13□□□□□ -0.63
TRAF4-206ENST00000454852 PMLP29590 882 aa11.13□□□□□ -0.63
TRAF4-206ENST00000454852 SPRP35270 261 aaPredicted RBP11.13□□□□□ -0.63
TRAF4-206ENST00000454852 HOXD12P35452 270 aa11.13□□□□□ -0.63
TRAF4-206ENST00000454852 MSH2P43246 934 aa11.13□□□□□ -0.63
TRAF4-206ENST00000454852 CSRP3P50461 194 aa11.13□□□□□ -0.63
TRAF4-206ENST00000454852 LIMK2P53671 638 aa11.13□□□□□ -0.63
TRAF4-206ENST00000454852 MPP1Q00013 466 aa11.13□□□□□ -0.63
TRAF4-206ENST00000454852 GSTM4Q03013 218 aa11.13□□□□□ -0.63
TRAF4-206ENST00000454852 ZNF844Q08AG5 666 aa11.13□□□□□ -0.63
TRAF4-206ENST00000454852 TMEM115Q12893 351 aaPredicted RBP11.13□□□□□ -0.63
TRAF4-206ENST00000454852 DNAJC3Q13217 504 aa11.13□□□□□ -0.63
TRAF4-206ENST00000454852 NFATC4Q14934 902 aa11.13□□□□□ -0.63
TRAF4-206ENST00000454852 EFTUD2Q15029 972 aaKnown RBP eCLIP11.13□□□□□ -0.635e-12■■■■■ 38.7
TRAF4-206ENST00000454852 ZNF789Q5FWF6 425 aa11.13□□□□□ -0.63
TRAF4-206ENST00000454852 MICALCLQ6ZW33 695 aa11.13□□□□□ -0.63
TRAF4-206ENST00000454852 LDB1Q86U70 411 aaPredicted RBP11.13□□□□□ -0.63
TRAF4-206ENST00000454852 SERAC1Q96JX3 654 aa11.13□□□□□ -0.63
TRAF4-206ENST00000454852 LINC00615Q96LM1 132 aaPredicted RBP11.13□□□□□ -0.63
TRAF4-206ENST00000454852 BIRC8Q96P09 236 aa11.13□□□□□ -0.63
TRAF4-206ENST00000454852 ZIM3Q96PE6 472 aa11.13□□□□□ -0.63
TRAF4-206ENST00000454852 GPR22Q99680 433 aa11.13□□□□□ -0.63
TRAF4-206ENST00000454852 LRFN3Q9BTN0 628 aa11.13□□□□□ -0.63
TRAF4-206ENST00000454852 FAM96AQ9H5X1 160 aa11.13□□□□□ -0.63
TRAF4-206ENST00000454852 FZD3Q9NPG1 666 aa11.13□□□□□ -0.63
TRAF4-206ENST00000454852 LATS2Q9NRM7 1088 aa11.13□□□□□ -0.63
TRAF4-206ENST00000454852 TXNDC16Q9P2K2 825 aa11.13□□□□□ -0.63
TRAF4-206ENST00000454852 KLHL42Q9P2K6 505 aa11.13□□□□□ -0.63
TRAF4-206ENST00000454852 PSMC3IPQ9P2W1 217 aaPredicted RBP11.13□□□□□ -0.63
TRAF4-206ENST00000454852 LGALS13Q9UHV8 139 aa11.13□□□□□ -0.63
TRAF4-206ENST00000454852 GPR34Q9UPC5 381 aa11.13□□□□□ -0.63
TRAF4-206ENST00000454852 FNDC3AQ9Y2H6 1198 aaKnown RBP11.13□□□□□ -0.63
TRAF4-206ENST00000454852 DNMT3AQ9Y6K1 912 aaPredicted RBP11.13□□□□□ -0.63
TRAF4-206ENST00000454852 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.12□□□□□ -0.63
TRAF4-206ENST00000454852 HMX2A2RU54 273 aa11.12□□□□□ -0.63
TRAF4-206ENST00000454852 KLHL33A6NCF5 533 aa11.12□□□□□ -0.63
TRAF4-206ENST00000454852 GOLGA8CPA6NN73 597 aa11.12□□□□□ -0.63
TRAF4-206ENST00000454852 MEI4A8MW99 385 aa11.12□□□□□ -0.63
TRAF4-206ENST00000454852 PRR5-ARHGAP8B1AHC4 643 aa11.12□□□□□ -0.63
TRAF4-206ENST00000454852 F8W8V4 182 aa11.12□□□□□ -0.63
TRAF4-206ENST00000454852 CACNB4O00305 520 aaPredicted RBP11.12□□□□□ -0.63
TRAF4-206ENST00000454852 RASGRF2O14827 1237 aa11.12□□□□□ -0.63
TRAF4-206ENST00000454852 NUAK1O60285 661 aa11.12□□□□□ -0.63
TRAF4-206ENST00000454852 MAGEC1O60732 1142 aa11.12□□□□□ -0.63
TRAF4-206ENST00000454852 KRT38O76015 456 aa11.12□□□□□ -0.63
TRAF4-206ENST00000454852 INHBAP08476 426 aa11.12□□□□□ -0.63
TRAF4-206ENST00000454852 ATP1B2P14415 290 aaPredicted RBP11.12□□□□□ -0.63
TRAF4-206ENST00000454852 PKMP14618 531 aaKnown RBP11.12□□□□□ -0.63
TRAF4-206ENST00000454852 MSH3P20585 1137 aa11.12□□□□□ -0.63
TRAF4-206ENST00000454852 MAGEA12P43365 314 aa11.12□□□□□ -0.63
TRAF4-206ENST00000454852 BCL7AQ4VC05 210 aa11.12□□□□□ -0.63
TRAF4-206ENST00000454852 KHDC1Q4VXA5 237 aaKnown RBP11.12□□□□□ -0.63
TRAF4-206ENST00000454852 TNFAIP8L3Q5GJ75 292 aa11.12□□□□□ -0.63
TRAF4-206ENST00000454852 LGSNQ5TDP6 509 aa11.12□□□□□ -0.63
TRAF4-206ENST00000454852 LYSMD4Q5XG99 296 aa11.12□□□□□ -0.63
TRAF4-206ENST00000454852 ZNF549Q6P9A3 640 aa11.12□□□□□ -0.63
TRAF4-206ENST00000454852 CNSTQ6PJW8 725 aa11.12□□□□□ -0.63
TRAF4-206ENST00000454852 TIFABQ6ZNK6 161 aa11.12□□□□□ -0.63
TRAF4-206ENST00000454852 ADGRG6Q86SQ4 1221 aa11.12□□□□□ -0.63
TRAF4-206ENST00000454852 TMEFF1Q8IYR6 380 aa11.12□□□□□ -0.63
TRAF4-206ENST00000454852 OTUD6BQ8N6M0 293 aa11.12□□□□□ -0.63
TRAF4-206ENST00000454852 UHMK1Q8TAS1 419 aaKnown RBP11.12□□□□□ -0.63
TRAF4-206ENST00000454852 MZB1Q8WU39 189 aa11.12□□□□□ -0.63
TRAF4-206ENST00000454852 KCNJ9Q92806 393 aa11.12□□□□□ -0.63
TRAF4-206ENST00000454852 MTBPQ96DY7 904 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms