RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 ITPKAP23677 461 aa11.1□□□□□ -0.63
DDR1-240ENST00000454612 DGKEP52429 567 aa11.1□□□□□ -0.63
DDR1-240ENST00000454612 NUP107P57740 925 aa11.1□□□□□ -0.63
DDR1-240ENST00000454612 PABPC1LQ4VXU2 614 aaKnown RBP11.1□□□□□ -0.63
DDR1-240ENST00000454612 OTUD1Q5VV17 481 aaPredicted RBP11.1□□□□□ -0.63
DDR1-240ENST00000454612 GALNT5Q7Z7M9 940 aa11.1□□□□□ -0.63
DDR1-240ENST00000454612 PGAM4Q8N0Y7 254 aa11.1□□□□□ -0.63
DDR1-240ENST00000454612 ARL14EPQ8N8R7 260 aaPredicted RBP11.1□□□□□ -0.63
DDR1-240ENST00000454612 SH3RF2Q8TEC5 729 aa11.1□□□□□ -0.63
DDR1-240ENST00000454612 NTAN1Q96AB6 310 aa11.1□□□□□ -0.63
DDR1-240ENST00000454612 NRBF2Q96F24 287 aa11.1□□□□□ -0.63
DDR1-240ENST00000454612 SLC9A7Q96T83 725 aa11.1□□□□□ -0.63
DDR1-240ENST00000454612 BBS2Q9BXC9 721 aa11.1□□□□□ -0.63
DDR1-240ENST00000454612 POLR1BQ9H9Y6 1135 aa11.1□□□□□ -0.63
DDR1-240ENST00000454612 SHROOM3Q8TF72 1996 aa11.1□□□□□ -0.63
DDR1-240ENST00000454612 HS6ST1O60243 411 aa11.09□□□□□ -0.63
DDR1-240ENST00000454612 TRMUO75648 421 aaKnown RBP11.09□□□□□ -0.63
DDR1-240ENST00000454612 CAPN15O75808 1086 aa11.09□□□□□ -0.63
DDR1-240ENST00000454612 MFN2O95140 757 aa11.09□□□□□ -0.63
DDR1-240ENST00000454612 TNFAIP8O95379 198 aa11.09□□□□□ -0.63
DDR1-240ENST00000454612 ASLP04424 464 aa11.09□□□□□ -0.63
DDR1-240ENST00000454612 HIST1H2AGP0C0S8 130 aaPredicted RBP11.09□□□□□ -0.63
DDR1-240ENST00000454612 FAM163BP0C2L3 166 aa11.09□□□□□ -0.63
DDR1-240ENST00000454612 HIST1H2ADP20671 130 aa11.09□□□□□ -0.63
DDR1-240ENST00000454612 MAGP20916 626 aa11.09□□□□□ -0.63
DDR1-240ENST00000454612 UFM1P61960 85 aa11.09□□□□□ -0.63
DDR1-240ENST00000454612 TRIM25Q14258 630 aaKnown RBP11.09□□□□□ -0.63
DDR1-240ENST00000454612 SH2D5Q6ZV89 423 aa11.09□□□□□ -0.63
DDR1-240ENST00000454612 CATSPER1Q8NEC5 780 aa11.09□□□□□ -0.63
DDR1-240ENST00000454612 STYXQ8WUJ0 223 aa11.09□□□□□ -0.63
DDR1-240ENST00000454612 EEF1AKMT1Q8WVE0 214 aa11.09□□□□□ -0.63
DDR1-240ENST00000454612 KCTD13Q8WZ19 329 aa11.09□□□□□ -0.63
DDR1-240ENST00000454612 CDKN2AIPNLQ96HQ2 116 aa11.09□□□□□ -0.63
DDR1-240ENST00000454612 HIST1H2AHQ96KK5 128 aa11.09□□□□□ -0.63
DDR1-240ENST00000454612 C3orf30Q96M34 536 aa11.09□□□□□ -0.63
DDR1-240ENST00000454612 SLC2A13Q96QE2 648 aa11.09□□□□□ -0.63
DDR1-240ENST00000454612 HIST1H2AJQ99878 128 aa11.09□□□□□ -0.63
DDR1-240ENST00000454612 H2AFJQ9BTM1 129 aa11.09□□□□□ -0.63
DDR1-240ENST00000454612 EIF2B3Q9NR50 452 aaKnown RBP11.09□□□□□ -0.63
DDR1-240ENST00000454612 USP22Q9UPT9 525 aa11.09□□□□□ -0.63
DDR1-240ENST00000454612 A0A0U1RQF3 1178 aa11.09□□□□□ -0.63
DDR1-240ENST00000454612 KRT87PA6NCN2 255 aa11.09□□□□□ -0.63
DDR1-240ENST00000454612 NOBOXO60393 691 aa11.09□□□□□ -0.63
DDR1-240ENST00000454612 CBFA2T3O75081 653 aa11.09□□□□□ -0.63
DDR1-240ENST00000454612 HOXD10P28358 340 aa11.09□□□□□ -0.63
DDR1-240ENST00000454612 MZF1P28698 734 aaPredicted RBP11.09□□□□□ -0.63
DDR1-240ENST00000454612 SERPINB1P30740 379 aa11.09□□□□□ -0.63
DDR1-240ENST00000454612 HPCAP84074 193 aa11.09□□□□□ -0.63
DDR1-240ENST00000454612 PFKPQ01813 784 aa11.09□□□□□ -0.63
DDR1-240ENST00000454612 CHRNB3Q05901 458 aa11.09□□□□□ -0.63
DDR1-240ENST00000454612 BFSP2Q13515 415 aa11.09□□□□□ -0.63
DDR1-240ENST00000454612 HNRNPDQ14103 355 aaKnown RBP11.09□□□□□ -0.63
DDR1-240ENST00000454612 BRMS1LQ5PSV4 323 aa11.09□□□□□ -0.63
DDR1-240ENST00000454612 TIFABQ6ZNK6 161 aa11.09□□□□□ -0.63
DDR1-240ENST00000454612 CD99L2Q8TCZ2 262 aa11.09□□□□□ -0.63
DDR1-240ENST00000454612 BTN2A3PQ96KV6 586 aa11.09□□□□□ -0.63
DDR1-240ENST00000454612 PKD2L2Q9NZM6 624 aa11.09□□□□□ -0.63
DDR1-240ENST00000454612 ORC6Q9Y5N6 252 aa11.09□□□□□ -0.63
DDR1-240ENST00000454612 BRCA2P51587 3418 aa11.09□□□□□ -0.63
DDR1-240ENST00000454612 PRORSD1PA6NEY8 169 aa11.09□□□□□ -0.63
DDR1-240ENST00000454612 S100A1P23297 94 aa11.09□□□□□ -0.63
DDR1-240ENST00000454612 ALDH4A1P30038 563 aa11.09□□□□□ -0.63
DDR1-240ENST00000454612 DAB2P98082 770 aa11.09□□□□□ -0.63
DDR1-240ENST00000454612 GNA12Q03113 381 aa11.09□□□□□ -0.63
DDR1-240ENST00000454612 C1QTNF12Q5T7M4 302 aa11.09□□□□□ -0.63
DDR1-240ENST00000454612 TXNDC8Q6A555 127 aa11.09□□□□□ -0.63
DDR1-240ENST00000454612 SLC24A5Q71RS6 500 aa11.09□□□□□ -0.63
DDR1-240ENST00000454612 GPR156Q8NFN8 814 aa11.09□□□□□ -0.63
DDR1-240ENST00000454612 TMIGD2Q96BF3 282 aa11.09□□□□□ -0.63
DDR1-240ENST00000454612 TPD52L3Q96J77 140 aa11.09□□□□□ -0.63
DDR1-240ENST00000454612 DPY30Q9C005 99 aa11.09□□□□□ -0.63
DDR1-240ENST00000454612 TNFRSF12AQ9NP84 129 aa11.09□□□□□ -0.63
DDR1-240ENST00000454612 ARL15Q9NXU5 204 aa11.09□□□□□ -0.63
DDR1-240ENST00000454612 LOC285556D6RIA3 1793 aa11.09□□□□□ -0.63
DDR1-240ENST00000454612 DIRAS1O95057 198 aa11.08□□□□□ -0.64
DDR1-240ENST00000454612 TFPTP0C1Z6 253 aa11.08□□□□□ -0.64
DDR1-240ENST00000454612 TM4SF4P48230 202 aa11.08□□□□□ -0.64
DDR1-240ENST00000454612 SQLEQ14534 574 aa11.08□□□□□ -0.64
DDR1-240ENST00000454612 AAGABQ6PD74 315 aa11.08□□□□□ -0.64
DDR1-240ENST00000454612 MBOAT1Q6ZNC8 495 aa11.08□□□□□ -0.64
DDR1-240ENST00000454612 ZNF621Q6ZSS3 439 aa11.08□□□□□ -0.64
DDR1-240ENST00000454612 PDSS2Q86YH6 399 aa11.08□□□□□ -0.64
DDR1-240ENST00000454612 PCSK9Q8NBP7 692 aaKnown RBP11.08□□□□□ -0.64
DDR1-240ENST00000454612 HPS1Q92902 700 aa11.08□□□□□ -0.64
DDR1-240ENST00000454612 AURKBQ96GD4 344 aaPredicted RBP11.08□□□□□ -0.64
DDR1-240ENST00000454612 HHIPL1Q96JK4 782 aa11.08□□□□□ -0.64
DDR1-240ENST00000454612 KIFC1Q9BW19 673 aa11.08□□□□□ -0.64
DDR1-240ENST00000454612 ACAT2Q9BWD1 397 aa11.08□□□□□ -0.64
DDR1-240ENST00000454612 ZDHHC6Q9H6R6 413 aa11.08□□□□□ -0.64
DDR1-240ENST00000454612 PLGRKTQ9HBL7 147 aa11.08□□□□□ -0.64
DDR1-240ENST00000454612 RIC8BQ9NVN3 520 aa11.08□□□□□ -0.64
DDR1-240ENST00000454612 MYRFQ9Y2G1 1151 aa11.08□□□□□ -0.64
DDR1-240ENST00000454612 PRKACGP22612 351 aa11.08□□□□□ -0.64
DDR1-240ENST00000454612 POU1F1P28069 291 aa11.08□□□□□ -0.64
DDR1-240ENST00000454612 HNF4AP41235 474 aa11.08□□□□□ -0.64
DDR1-240ENST00000454612 RGS4P49798 205 aa11.08□□□□□ -0.64
DDR1-240ENST00000454612 IST1P53990 364 aa11.08□□□□□ -0.64
DDR1-240ENST00000454612 SPIDRQ14159 915 aa11.08□□□□□ -0.64
DDR1-240ENST00000454612 HECTD3Q5T447 861 aa11.08□□□□□ -0.64
DDR1-240ENST00000454612 FAM45BPQ6NSW5 357 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms