RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 BRAFP15056 766 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 PFKPQ01813 784 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 SIGLEC14Q08ET2 396 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 MTAPQ13126 283 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 CALCOCO2Q13137 446 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 FXNQ16595 210 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 RWDD4Q6NW29 188 aaKnown RBP4.91□□□□□ -1.62
RIF1-207ENST00000454583 RNF111Q6ZNA4 994 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 TRPM8Q7Z2W7 1104 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 ISCA2Q86U28 154 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 LCA5Q86VQ0 697 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 ANKMY2Q8IV38 441 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 PALM2Q8IXS6 379 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 ZBTB9Q96C00 473 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 L3HYPDHQ96EM0 354 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 TMEM79Q9BSE2 394 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 NAT9Q9BTE0 207 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 AARSD1Q9BTE6 412 aaKnown RBP4.91□□□□□ -1.62
RIF1-207ENST00000454583 BOCQ9BWV1 1114 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 DUSP15Q9H1R2 295 aaPredicted RBP4.91□□□□□ -1.62
RIF1-207ENST00000454583 C1orf21Q9H246 121 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 ACTR5Q9H9F9 607 aaPredicted RBP4.91□□□□□ -1.62
RIF1-207ENST00000454583 FGFR1OP2Q9NVK5 253 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 DONSONQ9NYP3 566 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 ZNF148Q9UQR1 794 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.91□□□□□ -1.62
RIF1-207ENST00000454583 NUMA1Q14980 2115 aa4.91□□□□□ -1.62
RIF1-207ENST00000454583 TCP11X1B4DZS4 312 aa4.9□□□□□ -1.62
RIF1-207ENST00000454583 H0Y626 953 aa4.9□□□□□ -1.62
RIF1-207ENST00000454583 EIF3FO00303 357 aaPredicted RBP4.9□□□□□ -1.62
RIF1-207ENST00000454583 PLK4O00444 970 aa4.9□□□□□ -1.62
RIF1-207ENST00000454583 TOR1BO14657 336 aa4.9□□□□□ -1.62
RIF1-207ENST00000454583 PSIP1O75475 530 aaKnown RBP4.9□□□□□ -1.62
RIF1-207ENST00000454583 ATP5BP06576 529 aaKnown RBP4.9□□□□□ -1.62
RIF1-207ENST00000454583 HLA-EP13747 358 aa4.9□□□□□ -1.62
RIF1-207ENST00000454583 KRT4P19013 534 aa4.9□□□□□ -1.62
RIF1-207ENST00000454583 NTSR1P30989 418 aa4.9□□□□□ -1.62
RIF1-207ENST00000454583 STX2P32856 288 aa4.9□□□□□ -1.62
RIF1-207ENST00000454583 TPMTP51580 245 aa4.9□□□□□ -1.62
RIF1-207ENST00000454583 PGGT1BP53609 377 aa4.9□□□□□ -1.62
RIF1-207ENST00000454583 SNRPNP63162 240 aaKnown RBP4.9□□□□□ -1.62
RIF1-207ENST00000454583 MPP1Q00013 466 aa4.9□□□□□ -1.62
RIF1-207ENST00000454583 CST6Q15828 149 aa4.9□□□□□ -1.62
RIF1-207ENST00000454583 WSCD2Q2TBF2 565 aa4.9□□□□□ -1.62
RIF1-207ENST00000454583 FBXO43Q4G163 708 aa4.9□□□□□ -1.62
RIF1-207ENST00000454583 HSP90B2PQ58FF3 399 aa4.9□□□□□ -1.62
RIF1-207ENST00000454583 NAPEPLDQ6IQ20 393 aa4.9□□□□□ -1.62
RIF1-207ENST00000454583 RASGEF1AQ8N9B8 481 aa4.9□□□□□ -1.62
RIF1-207ENST00000454583 DENND6BQ8NEG7 585 aa4.9□□□□□ -1.62
RIF1-207ENST00000454583 CADM4Q8NFZ8 388 aa4.9□□□□□ -1.62
RIF1-207ENST00000454583 DDI1Q8WTU0 396 aa4.9□□□□□ -1.62
RIF1-207ENST00000454583 INPP5DQ92835 1189 aa4.9□□□□□ -1.62
RIF1-207ENST00000454583 CNDP1Q96KN2 507 aa4.9□□□□□ -1.62
RIF1-207ENST00000454583 REPIN1Q9BWE0 567 aaKnown RBP4.9□□□□□ -1.62
RIF1-207ENST00000454583 PIH1D1Q9NWS0 290 aaKnown RBP4.9□□□□□ -1.62
RIF1-207ENST00000454583 UBP1Q9NZI7 540 aa4.9□□□□□ -1.62
RIF1-207ENST00000454583 THEGQ9P2T0 379 aa4.9□□□□□ -1.62
RIF1-207ENST00000454583 HECAQ9UBI9 543 aaPredicted RBP4.9□□□□□ -1.62
RIF1-207ENST00000454583 MTO1Q9Y2Z2 717 aaKnown RBP4.9□□□□□ -1.62
RIF1-207ENST00000454583 DGKBQ9Y6T7 804 aa4.9□□□□□ -1.62
RIF1-207ENST00000454583 AP3B1O00203 1094 aa4.9□□□□□ -1.62
RIF1-207ENST00000454583 OR1I1O60431 355 aa4.9□□□□□ -1.62
RIF1-207ENST00000454583 PLIN3O60664 434 aa4.9□□□□□ -1.62
RIF1-207ENST00000454583 PIAS1O75925 651 aa4.9□□□□□ -1.62
RIF1-207ENST00000454583 SRP72O76094 671 aaKnown RBP4.9□□□□□ -1.62
RIF1-207ENST00000454583 PEBP1P30086 187 aaKnown RBP4.9□□□□□ -1.62
RIF1-207ENST00000454583 SLCO1A2P46721 670 aa4.9□□□□□ -1.62
RIF1-207ENST00000454583 CDKL1Q00532 357 aa4.9□□□□□ -1.62
RIF1-207ENST00000454583 IRF9Q00978 393 aa4.9□□□□□ -1.62
RIF1-207ENST00000454583 MTM1Q13496 603 aa4.9□□□□□ -1.62
RIF1-207ENST00000454583 ATP13A5Q4VNC0 1218 aa4.9□□□□□ -1.62
RIF1-207ENST00000454583 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.9□□□□□ -1.62
RIF1-207ENST00000454583 AGAP9Q5VTM2 703 aa4.9□□□□□ -1.62
RIF1-207ENST00000454583 CNSTQ6PJW8 725 aa4.9□□□□□ -1.62
RIF1-207ENST00000454583 PPP1R21Q6ZMI0 780 aa4.9□□□□□ -1.62
RIF1-207ENST00000454583 FAM83HQ6ZRV2 1179 aaPredicted RBP4.9□□□□□ -1.62
RIF1-207ENST00000454583 TAOK1Q7L7X3 1001 aa4.9□□□□□ -1.62
RIF1-207ENST00000454583 VRK3Q8IV63 474 aa4.9□□□□□ -1.62
RIF1-207ENST00000454583 NAT16Q8N8M0 369 aa4.9□□□□□ -1.62
RIF1-207ENST00000454583 EXOC2Q96KP1 924 aa4.9□□□□□ -1.62
RIF1-207ENST00000454583 CYTH2Q99418 400 aa4.9□□□□□ -1.62
RIF1-207ENST00000454583 CPNE1Q99829 537 aa4.9□□□□□ -1.62
RIF1-207ENST00000454583 PITPNM3Q9BZ71 974 aa4.9□□□□□ -1.62
RIF1-207ENST00000454583 HEATR9A2RTY3 570 aa4.9□□□□□ -1.63
RIF1-207ENST00000454583 E9PQ18 207 aa4.9□□□□□ -1.63
RIF1-207ENST00000454583 CBX4O00257 560 aa4.9□□□□□ -1.63
RIF1-207ENST00000454583 ZNF37AP17032 561 aaPredicted RBP4.9□□□□□ -1.63
RIF1-207ENST00000454583 CCR7P32248 378 aa4.9□□□□□ -1.63
RIF1-207ENST00000454583 RAP1GDS1P52306 607 aa4.9□□□□□ -1.63
RIF1-207ENST00000454583 KDSRQ06136 332 aa4.9□□□□□ -1.63
RIF1-207ENST00000454583 TCF15Q12870 199 aa4.9□□□□□ -1.63
RIF1-207ENST00000454583 EIF2B5Q13144 721 aaKnown RBP4.9□□□□□ -1.63
RIF1-207ENST00000454583 LAMB3Q13751 1172 aa4.9□□□□□ -1.63
RIF1-207ENST00000454583 SUZ12Q15022 739 aaKnown RBP4.9□□□□□ -1.63
RIF1-207ENST00000454583 AP1ARQ63HQ0 302 aa4.9□□□□□ -1.63
RIF1-207ENST00000454583 CES5AQ6NT32 575 aa4.9□□□□□ -1.63
RIF1-207ENST00000454583 PNCKQ6P2M8 343 aa4.9□□□□□ -1.63
RIF1-207ENST00000454583 MED25Q71SY5 747 aa4.9□□□□□ -1.63
RIF1-207ENST00000454583 NLRP9Q7RTR0 991 aa4.9□□□□□ -1.63
RIF1-207ENST00000454583 SNX20Q7Z614 316 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms