RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 HOXD4P09016 255 aaPredicted RBP5.23□□□□□ -1.57
SBDSP1-204ENST00000453858 CTSEP14091 401 aa5.23□□□□□ -1.57
SBDSP1-204ENST00000453858 TYRP1P17643 537 aa5.23□□□□□ -1.57
SBDSP1-204ENST00000453858 LIG4P49917 911 aa5.23□□□□□ -1.57
SBDSP1-204ENST00000453858 PEX5P50542 639 aa5.23□□□□□ -1.57
SBDSP1-204ENST00000453858 KIF11P52732 1056 aa5.23□□□□□ -1.57
SBDSP1-204ENST00000453858 NDST1P52848 882 aa5.23□□□□□ -1.57
SBDSP1-204ENST00000453858 MAZP56270 477 aaKnown RBP5.23□□□□□ -1.57
SBDSP1-204ENST00000453858 SOX8P57073 446 aa5.23□□□□□ -1.57
SBDSP1-204ENST00000453858 SRP54P61011 504 aaKnown RBP5.23□□□□□ -1.57
SBDSP1-204ENST00000453858 NKX6-1P78426 367 aaPredicted RBP5.23□□□□□ -1.57
SBDSP1-204ENST00000453858 TFAMQ00059 246 aaKnown RBP5.23□□□□□ -1.57
SBDSP1-204ENST00000453858 MYBPC3Q14896 1274 aa5.23□□□□□ -1.57
SBDSP1-204ENST00000453858 PDCD2Q16342 344 aaPredicted RBP5.23□□□□□ -1.57
SBDSP1-204ENST00000453858 TM4SF20Q53R12 229 aa5.23□□□□□ -1.57
SBDSP1-204ENST00000453858 FAM133BQ5BKY9 247 aaKnown RBP5.23□□□□□ -1.57
SBDSP1-204ENST00000453858 FAM26FQ5R3K3 315 aa5.23□□□□□ -1.57
SBDSP1-204ENST00000453858 FAAH2Q6GMR7 532 aa5.23□□□□□ -1.57
SBDSP1-204ENST00000453858 RPUSD3Q6P087 351 aaKnown RBP5.23□□□□□ -1.57
SBDSP1-204ENST00000453858 RFWD3Q6PCD5 774 aa5.23□□□□□ -1.57
SBDSP1-204ENST00000453858 FOXR2Q6PJQ5 311 aa5.23□□□□□ -1.57
SBDSP1-204ENST00000453858 WDR74Q6RFH5 385 aaPredicted RBP5.23□□□□□ -1.57
SBDSP1-204ENST00000453858 PAMR1Q6UXH9 720 aa5.23□□□□□ -1.57
SBDSP1-204ENST00000453858 SPOCD1Q6ZMY3 1216 aa5.23□□□□□ -1.57
SBDSP1-204ENST00000453858 ERN2Q76MJ5 926 aaKnown RBP5.23□□□□□ -1.57
SBDSP1-204ENST00000453858 ACOT1Q86TX2 421 aa5.23□□□□□ -1.57
SBDSP1-204ENST00000453858 WDR49Q8IV35 697 aa5.23□□□□□ -1.57
SBDSP1-204ENST00000453858 PPM1KQ8N3J5 372 aa5.23□□□□□ -1.57
SBDSP1-204ENST00000453858 ZADH2Q8N4Q0 377 aa5.23□□□□□ -1.57
SBDSP1-204ENST00000453858 C3orf20Q8ND61 904 aa5.23□□□□□ -1.57
SBDSP1-204ENST00000453858 TMIEQ8NEW7 156 aa5.23□□□□□ -1.57
SBDSP1-204ENST00000453858 CCL4L1Q8NHW4 92 aa5.23□□□□□ -1.57
SBDSP1-204ENST00000453858 TSPAN17Q96FV3 270 aa5.23□□□□□ -1.57
SBDSP1-204ENST00000453858 AIFM3Q96NN9 605 aa5.23□□□□□ -1.57
SBDSP1-204ENST00000453858 SLC26A6Q9BXS9 759 aa5.23□□□□□ -1.57
SBDSP1-204ENST00000453858 EPB41L4BQ9H329 900 aa5.23□□□□□ -1.57
SBDSP1-204ENST00000453858 ZDHHC6Q9H6R6 413 aa5.23□□□□□ -1.57
SBDSP1-204ENST00000453858 IPPKQ9H8X2 491 aa5.23□□□□□ -1.57
SBDSP1-204ENST00000453858 MBNL1Q9NR56 388 aaKnown RBP5.23□□□□□ -1.57
SBDSP1-204ENST00000453858 IL17CQ9P0M4 197 aa5.23□□□□□ -1.57
SBDSP1-204ENST00000453858 KCNG1Q9UIX4 513 aa5.23□□□□□ -1.57
SBDSP1-204ENST00000453858 DGKBQ9Y6T7 804 aa5.23□□□□□ -1.57
SBDSP1-204ENST00000453858 DNAH1Q9P2D7 4330 aa5.22□□□□□ -1.57
SBDSP1-204ENST00000453858 GOLGA6L7A0A1B0GV03 622 aa5.22□□□□□ -1.57
SBDSP1-204ENST00000453858 A8MU76 341 aa5.22□□□□□ -1.57
SBDSP1-204ENST00000453858 AP1G1O43747 822 aa5.22□□□□□ -1.57
SBDSP1-204ENST00000453858 CREB3O43889 395 aa5.22□□□□□ -1.57
SBDSP1-204ENST00000453858 DNAJC8O75937 253 aaPredicted RBP5.22□□□□□ -1.57
SBDSP1-204ENST00000453858 ZWINTO95229 277 aa5.22□□□□□ -1.57
SBDSP1-204ENST00000453858 RASGRP1O95267 797 aa5.22□□□□□ -1.57
SBDSP1-204ENST00000453858 LATS1O95835 1130 aa5.22□□□□□ -1.57
SBDSP1-204ENST00000453858 FPR2P25090 351 aa5.22□□□□□ -1.57
SBDSP1-204ENST00000453858 CFPP27918 469 aa5.22□□□□□ -1.57
SBDSP1-204ENST00000453858 KCNAB1Q14722 419 aa5.22□□□□□ -1.57
SBDSP1-204ENST00000453858 KIR3DS1Q14943 382 aa5.22□□□□□ -1.57
SBDSP1-204ENST00000453858 NECTIN1Q15223 517 aa5.22□□□□□ -1.57
SBDSP1-204ENST00000453858 DLG2Q15700 870 aa5.22□□□□□ -1.57
SBDSP1-204ENST00000453858 GPR19Q15760 415 aa5.22□□□□□ -1.57
SBDSP1-204ENST00000453858 C3AR1Q16581 482 aa5.22□□□□□ -1.57
SBDSP1-204ENST00000453858 BMP2KLQ5H9B9 411 aa5.22□□□□□ -1.57
SBDSP1-204ENST00000453858 FAM69BQ5VUD6 431 aa5.22□□□□□ -1.57
SBDSP1-204ENST00000453858 STEAP3Q658P3 488 aa5.22□□□□□ -1.57
SBDSP1-204ENST00000453858 B3GNTL1Q67FW5 361 aaPredicted RBP5.22□□□□□ -1.57
SBDSP1-204ENST00000453858 FAM199XQ6PEV8 388 aaPredicted RBP5.22□□□□□ -1.57
SBDSP1-204ENST00000453858 GFRALQ6UXV0 394 aa5.22□□□□□ -1.57
SBDSP1-204ENST00000453858 CCDC186Q7Z3E2 898 aa5.22□□□□□ -1.57
SBDSP1-204ENST00000453858 TECPR1Q7Z6L1 1165 aa5.22□□□□□ -1.57
SBDSP1-204ENST00000453858 TADA2BQ86TJ2 420 aa5.22□□□□□ -1.57
SBDSP1-204ENST00000453858 CXorf67Q86X51 503 aaPredicted RBP5.22□□□□□ -1.57
SBDSP1-204ENST00000453858 MFN1Q8IWA4 741 aa5.22□□□□□ -1.57
SBDSP1-204ENST00000453858 BCORP1Q8N888 145 aa5.22□□□□□ -1.57
SBDSP1-204ENST00000453858 DNAAF3Q8N9W5 541 aa5.22□□□□□ -1.57
SBDSP1-204ENST00000453858 NR4A3Q92570 626 aa5.22□□□□□ -1.57
SBDSP1-204ENST00000453858 LARP4BQ92615 738 aaKnown RBP5.22□□□□□ -1.57
SBDSP1-204ENST00000453858 NACC2Q96BF6 587 aa5.22□□□□□ -1.57
SBDSP1-204ENST00000453858 STAMBPL1Q96FJ0 436 aa5.22□□□□□ -1.57
SBDSP1-204ENST00000453858 BICD1Q96G01 975 aa5.22□□□□□ -1.57
SBDSP1-204ENST00000453858 SMARCD1Q96GM5 515 aa5.22□□□□□ -1.57
SBDSP1-204ENST00000453858 WDR77Q9BQA1 342 aaPredicted RBP5.22□□□□□ -1.57
SBDSP1-204ENST00000453858 JAM3Q9BX67 310 aa5.22□□□□□ -1.57
SBDSP1-204ENST00000453858 POLDIP3Q9BY77 421 aaKnown RBP5.22□□□□□ -1.57
SBDSP1-204ENST00000453858 IKZF4Q9H2S9 585 aa5.22□□□□□ -1.57
SBDSP1-204ENST00000453858 PCDH18Q9HCL0 1135 aa5.22□□□□□ -1.57
SBDSP1-204ENST00000453858 RASSF1Q9NS23 344 aa5.22□□□□□ -1.57
SBDSP1-204ENST00000453858 CATSPERZQ9NTU4 200 aa5.22□□□□□ -1.57
SBDSP1-204ENST00000453858 KLHL14Q9P2G3 628 aa5.22□□□□□ -1.57
SBDSP1-204ENST00000453858 RASAL2Q9UJF2 1139 aa5.22□□□□□ -1.57
SBDSP1-204ENST00000453858 FBXL7Q9UJT9 491 aa5.22□□□□□ -1.57
SBDSP1-204ENST00000453858 G3BP2Q9UN86 482 aaKnown RBP5.22□□□□□ -1.57
SBDSP1-204ENST00000453858 KCNJ14Q9UNX9 436 aa5.22□□□□□ -1.57
SBDSP1-204ENST00000453858 MAPRE3Q9UPY8 281 aa5.22□□□□□ -1.57
SBDSP1-204ENST00000453858 FARSAQ9Y285 508 aaKnown RBP5.22□□□□□ -1.57
SBDSP1-204ENST00000453858 ZNF835Q9Y2P0 537 aa5.22□□□□□ -1.57
SBDSP1-204ENST00000453858 MEMO1Q9Y316 297 aa5.22□□□□□ -1.57
SBDSP1-204ENST00000453858 DOCK10Q96BY6 2186 aa5.21□□□□□ -1.58
SBDSP1-204ENST00000453858 CCDC78A2IDD5 438 aa5.21□□□□□ -1.58
SBDSP1-204ENST00000453858 LRRC10BA6NIK2 292 aa5.21□□□□□ -1.58
SBDSP1-204ENST00000453858 DRGXA6NNA5 263 aa5.21□□□□□ -1.58
SBDSP1-204ENST00000453858 RHPN2P1A8MT19 583 aa5.21□□□□□ -1.58
SBDSP1-204ENST00000453858 B4DGG1 531 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms