RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 TRAPPC5Q8IUR0 188 aa9.57□□□□□ -0.88
USP54-207ENST00000451492 UBL4BQ8N7F7 174 aa9.57□□□□□ -0.88
USP54-207ENST00000451492 LRRC57Q8N9N7 239 aa9.57□□□□□ -0.88
USP54-207ENST00000451492 NAT14Q8WUY8 206 aa9.57□□□□□ -0.88
USP54-207ENST00000451492 GLYATL1Q969I3 302 aa9.57□□□□□ -0.88
USP54-207ENST00000451492 SCARF2Q96GP6 870 aaPredicted RBP9.57□□□□□ -0.88
USP54-207ENST00000451492 CCDC74BQ96LY2 380 aa9.57□□□□□ -0.88
USP54-207ENST00000451492 SLC46A1Q96NT5 459 aa9.57□□□□□ -0.88
USP54-207ENST00000451492 FCRL5Q96RD9 977 aa9.57□□□□□ -0.88
USP54-207ENST00000451492 VAT1Q99536 393 aa9.57□□□□□ -0.88
USP54-207ENST00000451492 SLC38A3Q99624 504 aa9.57□□□□□ -0.88
USP54-207ENST00000451492 FERMT1Q9BQL6 677 aa9.57□□□□□ -0.88
USP54-207ENST00000451492 CARD9Q9H257 536 aa9.57□□□□□ -0.88
USP54-207ENST00000451492 STN1Q9H668 368 aaKnown RBP9.57□□□□□ -0.88
USP54-207ENST00000451492 PRDM8Q9NQV8 689 aa9.57□□□□□ -0.88
USP54-207ENST00000451492 RAD18Q9NS91 495 aa9.57□□□□□ -0.88
USP54-207ENST00000451492 IMPACTQ9P2X3 320 aa9.57□□□□□ -0.88
USP54-207ENST00000451492 KLHL3Q9UH77 587 aa9.57□□□□□ -0.88
USP54-207ENST00000451492 TRHDEQ9UKU6 1024 aa9.57□□□□□ -0.88
USP54-207ENST00000451492 PCDHGA8Q9Y5G5 932 aa9.57□□□□□ -0.88
USP54-207ENST00000451492 ARL5AQ9Y689 179 aa9.57□□□□□ -0.88
USP54-207ENST00000451492 CAPN6Q9Y6Q1 641 aa9.57□□□□□ -0.88
USP54-207ENST00000451492 IGHV1OR21-1A0A087WYE8 117 aa9.56□□□□□ -0.88
USP54-207ENST00000451492 LOC285095A0A1B0GVY8 99 aa9.56□□□□□ -0.88
USP54-207ENST00000451492 RGSL1A5PLK6 1076 aa9.56□□□□□ -0.88
USP54-207ENST00000451492 GOLGA6L9A6NEM1 432 aa9.56□□□□□ -0.88
USP54-207ENST00000451492 A8MU76 341 aa9.56□□□□□ -0.88
USP54-207ENST00000451492 PDZK1P1A8MUH7 402 aa9.56□□□□□ -0.88
USP54-207ENST00000451492 CDRT15L2A8MXV6 281 aa9.56□□□□□ -0.88
USP54-207ENST00000451492 NUAK1O60285 661 aa9.56□□□□□ -0.88
USP54-207ENST00000451492 UGT1A9O60656 530 aa9.56□□□□□ -0.88
USP54-207ENST00000451492 DXOO77932 396 aaKnown RBP9.56□□□□□ -0.88
USP54-207ENST00000451492 TJP3O95049 919 aa9.56□□□□□ -0.88
USP54-207ENST00000451492 ITGA2BP08514 1039 aa9.56□□□□□ -0.88
USP54-207ENST00000451492 UGT1A6P19224 532 aa9.56□□□□□ -0.88
USP54-207ENST00000451492 HLA-DPA1P20036 260 aa9.56□□□□□ -0.88
USP54-207ENST00000451492 UGT1A1P22309 533 aa9.56□□□□□ -0.88
USP54-207ENST00000451492 UGT1A4P22310 534 aa9.56□□□□□ -0.88
USP54-207ENST00000451492 RPL10P27635 214 aaKnown RBP9.56□□□□□ -0.88
USP54-207ENST00000451492 SLC5A2P31639 672 aa9.56□□□□□ -0.88
USP54-207ENST00000451492 AKT1P31749 480 aa9.56□□□□□ -0.88
USP54-207ENST00000451492 CCKBRP32239 447 aa9.56□□□□□ -0.88
USP54-207ENST00000451492 UGT1A3P35503 534 aa9.56□□□□□ -0.88
USP54-207ENST00000451492 DRG2P55039 364 aaKnown RBP9.56□□□□□ -0.88
USP54-207ENST00000451492 TMPRSS15P98073 1019 aa9.56□□□□□ -0.88
USP54-207ENST00000451492 XRCC4Q13426 336 aa9.56□□□□□ -0.88
USP54-207ENST00000451492 GTF2H3Q13889 308 aa9.56□□□□□ -0.88
USP54-207ENST00000451492 MICALCLQ6ZW33 695 aa9.56□□□□□ -0.88
USP54-207ENST00000451492 DET1Q7L5Y6 550 aa9.56□□□□□ -0.88
USP54-207ENST00000451492 ZNF438Q7Z4V0 828 aa9.56□□□□□ -0.88
USP54-207ENST00000451492 C17orf82Q86X59 251 aaPredicted RBP9.56□□□□□ -0.88
USP54-207ENST00000451492 SLITRK4Q8IW52 837 aa9.56□□□□□ -0.88
USP54-207ENST00000451492 RAVER1Q8IY67 606 aaKnown RBP9.56□□□□□ -0.88
USP54-207ENST00000451492 SYCE1Q8N0S2 351 aa9.56□□□□□ -0.88
USP54-207ENST00000451492 TXLNBQ8N3L3 684 aa9.56□□□□□ -0.88
USP54-207ENST00000451492 SFRP1Q8N474 314 aa9.56□□□□□ -0.88
USP54-207ENST00000451492 TTC30BQ8N4P2 665 aa9.56□□□□□ -0.88
USP54-207ENST00000451492 GRAMD1AQ96CP6 724 aa9.56□□□□□ -0.88
USP54-207ENST00000451492 RNF31Q96EP0 1072 aa9.56□□□□□ -0.88
USP54-207ENST00000451492 CALR3Q96L12 384 aaKnown RBP9.56□□□□□ -0.88
USP54-207ENST00000451492 TTC25Q96NG3 672 aa9.56□□□□□ -0.88
USP54-207ENST00000451492 BBC3Q96PG8 261 aaPredicted RBP9.56□□□□□ -0.88
USP54-207ENST00000451492 PLEKHG4BQ96PX9 1271 aa9.56□□□□□ -0.88
USP54-207ENST00000451492 RMI1Q9H9A7 625 aa9.56□□□□□ -0.88
USP54-207ENST00000451492 UGT1A7Q9HAW7 530 aa9.56□□□□□ -0.88
USP54-207ENST00000451492 UGT1A10Q9HAW8 530 aa9.56□□□□□ -0.88
USP54-207ENST00000451492 UGT1A8Q9HAW9 530 aa9.56□□□□□ -0.88
USP54-207ENST00000451492 TRIM39Q9HCM9 518 aa9.56□□□□□ -0.88
USP54-207ENST00000451492 FAM8A1Q9UBU6 413 aa9.56□□□□□ -0.88
USP54-207ENST00000451492 GUCA1BQ9UMX6 200 aa9.56□□□□□ -0.88
USP54-207ENST00000451492 R3HDM2Q9Y2K5 976 aaKnown RBP9.56□□□□□ -0.88
USP54-207ENST00000451492 PKP3Q9Y446 797 aa9.56□□□□□ -0.88
USP54-207ENST00000451492 SDK2Q58EX2 2172 aa9.56□□□□□ -0.88
USP54-207ENST00000451492 ATMQ13315 3056 aa9.55□□□□□ -0.88
USP54-207ENST00000451492 PRAMEF33A0A0G2JMD5 474 aa9.55□□□□□ -0.88
USP54-207ENST00000451492 IGHV5-10-1A0A0J9YXX1 117 aa9.55□□□□□ -0.88
USP54-207ENST00000451492 GLYATL1P3A0A0U1RQE8 302 aa9.55□□□□□ -0.88
USP54-207ENST00000451492 TCRBV7S2A1N4TA0A589 114 aa9.55□□□□□ -0.88
USP54-207ENST00000451492 OR2AG2A6NM03 316 aa9.55□□□□□ -0.88
USP54-207ENST00000451492 EIF4E1BA6NMX2 242 aaKnown RBP9.55□□□□□ -0.88
USP54-207ENST00000451492 TMX2-CTNND1H3BSU7 103 aa9.55□□□□□ -0.88
USP54-207ENST00000451492 CCL22O00626 93 aa9.55□□□□□ -0.88
USP54-207ENST00000451492 KMOO15229 486 aa9.55□□□□□ -0.88
USP54-207ENST00000451492 STX7O15400 261 aaKnown RBP9.55□□□□□ -0.88
USP54-207ENST00000451492 DDX3YO15523 660 aaKnown RBP9.55□□□□□ -0.88
USP54-207ENST00000451492 ZW10O43264 779 aa9.55□□□□□ -0.88
USP54-207ENST00000451492 DUX1O43812 170 aa9.55□□□□□ -0.88
USP54-207ENST00000451492 PRAMEF10O60809 474 aa9.55□□□□□ -0.88
USP54-207ENST00000451492 ANXA9O76027 345 aa9.55□□□□□ -0.88
USP54-207ENST00000451492 CDK14O94921 469 aa9.55□□□□□ -0.88
USP54-207ENST00000451492 CCL4P13236 92 aa9.55□□□□□ -0.88
USP54-207ENST00000451492 F3P13726 295 aa9.55□□□□□ -0.88
USP54-207ENST00000451492 CD1CP29017 333 aa9.55□□□□□ -0.88
USP54-207ENST00000451492 CA5AP35218 305 aa9.55□□□□□ -0.88
USP54-207ENST00000451492 PTPN7P35236 360 aa9.55□□□□□ -0.88
USP54-207ENST00000451492 HMGCLP35914 325 aa9.55□□□□□ -0.88
USP54-207ENST00000451492 TMPRSS3P57727 454 aa9.55□□□□□ -0.88
USP54-207ENST00000451492 SRSF6Q13247 344 aaKnown RBP9.55□□□□□ -0.88
USP54-207ENST00000451492 EIF3IQ13347 325 aaKnown RBP9.55□□□□□ -0.88
USP54-207ENST00000451492 PRPSAP1Q14558 356 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms