RNA–Protein interactions for RNA: ENST00000449943.5

SYVN1-204, Transcript of synoviolin 1, humanhuman

TSL 2

Gene SYVN1, Length 4,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-204ENST00000449943 FGF4P08620 206 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 PCNAP12004 261 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 STC1P52823 247 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 INTS11Q5TA45 600 aaKnown RBP11.23□□□□□ -0.61
SYVN1-204ENST00000449943 SYVN1Q86TM6 617 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 REM2Q8IYK8 340 aaPredicted RBP11.23□□□□□ -0.61
SYVN1-204ENST00000449943 FNDC5Q8NAU1 212 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 TRPV3Q8NET8 790 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 SUSD3Q96L08 255 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 HGH1Q9BTY7 390 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 CXorf21Q9HAI6 301 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 TAS2R13Q9NYV9 303 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 SLC27A5Q9Y2P5 690 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 SH3BP1Q9Y3L3 701 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 WASH4PA8MWX3 477 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 F5H5T6 163 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 B4GALT3O60512 393 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 PQBP1O60828 265 aaKnown RBP11.23□□□□□ -0.61
SYVN1-204ENST00000449943 URODP06132 367 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 MTA1Q13330 715 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 PMS2P3Q13401 168 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 KCTD21Q4G0X4 260 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 TMEM214Q6NUQ4 689 aaKnown RBP11.23□□□□□ -0.61
SYVN1-204ENST00000449943 TMEM26Q6ZUK4 368 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 MFSD2AQ8NA29 543 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 SLC39A13Q96H72 371 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 TFB2MQ9H5Q4 396 aaKnown RBP11.23□□□□□ -0.61
SYVN1-204ENST00000449943 HACD3Q9P035 362 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 MARCH2Q9P0N8 246 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 PCDHA9Q9Y5H5 950 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 GPR45Q9Y5Y3 372 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 DOCK3Q8IZD9 2030 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 A0A0D9SEW6 157 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 KERAO60938 352 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 SLC22A3O75751 556 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 FGF1P05230 155 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 TSTA3Q13630 321 aaPredicted RBP11.23□□□□□ -0.61
SYVN1-204ENST00000449943 PTPRNQ16849 979 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 SLC36A3Q495N2 470 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 ZBED5Q49AG3 693 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 TMTC4Q5T4D3 741 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 FAM171A1Q5VUB5 890 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 SLC2A7Q6PXP3 512 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 FRA10AC1Q70Z53 315 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 ZNF280BQ86YH2 543 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 EFHBQ8N7U6 833 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 SIDT2Q8NBJ9 832 aaKnown RBP11.23□□□□□ -0.61
SYVN1-204ENST00000449943 THAP11Q96EK4 314 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 CDKN2AIPNLQ96HQ2 116 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 BPIFA1Q9NP55 256 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 DNAAF2Q9NVR5 837 aaKnown RBP11.23□□□□□ -0.61
SYVN1-204ENST00000449943 CD274Q9NZQ7 290 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 SPO11Q9Y5K1 396 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 A0A1W2PP18 115 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 ASPDHA6ND91 283 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 RASAL1O95294 804 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 C1RP00736 705 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 LDLRP01130 860 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 HNRNPCP07910 306 aaKnown RBP eCLIP11.23□□□□□ -0.61
SYVN1-204ENST00000449943 SERPINF2P08697 491 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 RPS9P46781 194 aaKnown RBP11.23□□□□□ -0.61
SYVN1-204ENST00000449943 IL10RBQ08334 325 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 ABRAXAS1Q6UWZ7 409 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 PACRGLQ8N7B6 248 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 PPM1MQ96MI6 270 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 SLC30A3Q99726 388 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 NAA50Q9GZZ1 169 aaKnown RBP11.23□□□□□ -0.61
SYVN1-204ENST00000449943 SYTL2Q9HCH5 934 aa11.23□□□□□ -0.61
SYVN1-204ENST00000449943 TLR8Q9NR97 1041 aaKnown RBP11.23□□□□□ -0.61
SYVN1-204ENST00000449943 SMPD3Q9NY59 655 aaPredicted RBP11.23□□□□□ -0.61
SYVN1-204ENST00000449943 EIF2B4Q9UI10 523 aaKnown RBP11.23□□□□□ -0.61
SYVN1-204ENST00000449943 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.22□□□□□ -0.61
SYVN1-204ENST00000449943 TBKBP1A7MCY6 615 aa11.22□□□□□ -0.61
SYVN1-204ENST00000449943 ATE1O95260 518 aa11.22□□□□□ -0.61
SYVN1-204ENST00000449943 TFPTP0C1Z6 253 aa11.22□□□□□ -0.61
SYVN1-204ENST00000449943 HLA-DPA1P20036 260 aa11.22□□□□□ -0.61
SYVN1-204ENST00000449943 VARSP26640 1264 aaKnown RBP11.22□□□□□ -0.61
SYVN1-204ENST00000449943 NUP107P57740 925 aa11.22□□□□□ -0.61
SYVN1-204ENST00000449943 ZNF177Q13360 481 aaPredicted RBP11.22□□□□□ -0.61
SYVN1-204ENST00000449943 SERINC3Q13530 473 aa11.22□□□□□ -0.61
SYVN1-204ENST00000449943 KCTD8Q6ZWB6 473 aa11.22□□□□□ -0.61
SYVN1-204ENST00000449943 GLT6D1Q7Z4J2 308 aa11.22□□□□□ -0.61
SYVN1-204ENST00000449943 MRPL10Q7Z7H8 261 aaKnown RBP11.22□□□□□ -0.61
SYVN1-204ENST00000449943 GALNT7Q86SF2 657 aa11.22□□□□□ -0.61
SYVN1-204ENST00000449943 GPR180Q86V85 440 aa11.22□□□□□ -0.61
SYVN1-204ENST00000449943 ZNF683Q8IZ20 524 aa11.22□□□□□ -0.61
SYVN1-204ENST00000449943 OR7D4Q8NG98 312 aa11.22□□□□□ -0.61
SYVN1-204ENST00000449943 BRSK1Q8TDC3 778 aa11.22□□□□□ -0.61
SYVN1-204ENST00000449943 KIAA1191Q96A73 305 aa11.22□□□□□ -0.61
SYVN1-204ENST00000449943 BTN2A3PQ96KV6 586 aa11.22□□□□□ -0.61
SYVN1-204ENST00000449943 CDK5RAP1Q96SZ6 601 aaKnown RBP11.22□□□□□ -0.61
SYVN1-204ENST00000449943 NPLQ9BXD5 320 aaPredicted RBP11.22□□□□□ -0.61
SYVN1-204ENST00000449943 OSBPL6Q9BZF3 934 aa11.22□□□□□ -0.61
SYVN1-204ENST00000449943 SCML2Q9UQR0 700 aa11.22□□□□□ -0.61
SYVN1-204ENST00000449943 OAS3Q9Y6K5 1087 aaKnown RBP11.22□□□□□ -0.61
SYVN1-204ENST00000449943 MIA3Q5JRA6 1907 aa11.22□□□□□ -0.61
SYVN1-204ENST00000449943 A0A1W2PPW3 197 aa11.22□□□□□ -0.61
SYVN1-204ENST00000449943 OR1I1O60431 355 aa11.22□□□□□ -0.61
SYVN1-204ENST00000449943 SYNCRIPO60506 623 aaKnown RBP11.22□□□□□ -0.61
SYVN1-204ENST00000449943 NIPSNAP2O75323 286 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms