RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 SMARCB1Q12824 385 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 MRPL28Q13084 256 aaKnown RBP7.1□□□□□ -1.27
BEST1-202ENST00000449131 C1DQ13901 141 aaKnown RBP7.1□□□□□ -1.27
BEST1-202ENST00000449131 NCF4Q15080 339 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 DGUOKQ16854 277 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 PAGE2BQ5JRK9 111 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 TMEM63BQ5T3F8 832 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 C10orf62Q5T681 223 aaPredicted RBP7.1□□□□□ -1.27
BEST1-202ENST00000449131 ARMC6Q6NXE6 501 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 CASP12Q6UXS9 341 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 PLD6Q8N2A8 252 aaKnown RBP7.1□□□□□ -1.27
BEST1-202ENST00000449131 DRAXINQ8NBI3 349 aaPredicted RBP7.1□□□□□ -1.27
BEST1-202ENST00000449131 DBF4BQ8NFT6 615 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 STARD8Q92502 1023 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 MTERF3Q96E29 417 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 PLEKHG4BQ96PX9 1271 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 BTBD9Q96Q07 612 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 BBS4Q96RK4 519 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 SLC7A5P2Q9GIP4 190 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 CACNA2D2Q9NY47 1150 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 CFAP97Q9P2B7 532 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 ZDHHC2Q9UIJ5 367 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 RPS6KA6Q9UK32 745 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 RAB26Q9ULW5 256 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 SAMHD1Q9Y3Z3 626 aaKnown RBP7.1□□□□□ -1.27
BEST1-202ENST00000449131 GLYATL1P3A0A0U1RQE8 302 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 H3BSA7 217 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 J3KR12 359 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 STK16O75716 305 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 CAPN1P07384 714 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 ZNF37AP17032 561 aaPredicted RBP7.1□□□□□ -1.27
BEST1-202ENST00000449131 YAP1P46937 504 aaKnown RBP7.1□□□□□ -1.27
BEST1-202ENST00000449131 MAPKAPK2P49137 400 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 EIF2B2P49770 351 aaKnown RBP7.1□□□□□ -1.27
BEST1-202ENST00000449131 PSMD7P51665 324 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 PRKAG1P54619 331 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 SLC10A2Q12908 348 aaPredicted RBP7.1□□□□□ -1.27
BEST1-202ENST00000449131 PCLAFQ15004 111 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 CYP2A13Q16696 494 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 ZNF792Q3KQV3 632 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 RBM20Q5T481 1227 aaKnown RBP7.1□□□□□ -1.27
BEST1-202ENST00000449131 LYPLAL1Q5VWZ2 237 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 MBLAC2Q68D91 279 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 FBXL22Q6P050 247 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 PRSS55Q6UWB4 352 aaPredicted RBP7.1□□□□□ -1.27
BEST1-202ENST00000449131 CCDC149Q6ZUS6 474 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 MTSS1LQ765P7 747 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 PROSER1Q86XN7 944 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 TP53INP2Q8IXH6 220 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 OR7A2PQ8NGA2 310 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 DENND1AQ8TEH3 1009 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 GIPC3Q8TF64 312 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 PROX1Q92786 737 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 TNKS2Q9H2K2 1166 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 COQ10BQ9H8M1 238 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 LRTM1Q9HBL6 345 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 CRTAC1Q9NQ79 661 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 KLHL20Q9Y2M5 609 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 KCNE2Q9Y6J6 123 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 TUBGCP6Q96RT7 1819 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 TBC1D3BA6NDS4 549 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 A8MT66 165 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 KPNA5O15131 536 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 XYLBO75191 536 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 PRAMEF1O95521 474 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 PRKCGP05129 697 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 CYP4B1P13584 511 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 SELPP16109 830 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 MLLT6P55198 1093 aaPredicted RBP7.1□□□□□ -1.27
BEST1-202ENST00000449131 CDH4P55283 916 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 MADCAM1Q13477 382 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 ADGRE1Q14246 886 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 PAQR3Q6TCH7 311 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 CERS6Q6ZMG9 384 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 TIFABQ6ZNK6 161 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 ASRGL1Q7L266 308 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 OOSP2Q86WS3 158 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 RASAL3Q86YV0 1011 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 SIDT2Q8NBJ9 832 aaKnown RBP7.1□□□□□ -1.27
BEST1-202ENST00000449131 ZNF540Q8NDQ6 660 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 OR9I1Q8NGQ6 314 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 NELL1Q92832 810 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 NACC2Q96BF6 587 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 C16orf70Q9BSU1 422 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 ATG10Q9H0Y0 220 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 ALG2Q9H553 416 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 BRD9Q9H8M2 597 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 PREBQ9HCU5 417 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 KLHL28Q9NXS3 571 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 SIRPGQ9P1W8 387 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 GIMAP2Q9UG22 337 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 DMTF1Q9Y222 760 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 FCF1Q9Y324 198 aaKnown RBP7.1□□□□□ -1.27
BEST1-202ENST00000449131 PCDHB1Q9Y5F3 818 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 COPG1Q9Y678 874 aaKnown RBP7.1□□□□□ -1.27
BEST1-202ENST00000449131 DGKBQ9Y6T7 804 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 TIAM2Q8IVF5 1701 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 FAM72CH0Y354 149 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 PIRO00625 290 aa7.1□□□□□ -1.27
BEST1-202ENST00000449131 SYN3O14994 580 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms