RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 FASLGP48023 281 aa13.9□□□□□ -0.18
RTFDC1-204ENST00000449062 XIAPP98170 497 aa13.9□□□□□ -0.18
RTFDC1-204ENST00000449062 CFHR1Q03591 330 aa13.9□□□□□ -0.18
RTFDC1-204ENST00000449062 PEX6Q13608 980 aa13.9□□□□□ -0.18
RTFDC1-204ENST00000449062 SPARCL1Q14515 664 aa13.9□□□□□ -0.18
RTFDC1-204ENST00000449062 SIX1Q15475 284 aaPredicted RBP13.9□□□□□ -0.18
RTFDC1-204ENST00000449062 OASLQ15646 514 aaKnown RBP13.9□□□□□ -0.18
RTFDC1-204ENST00000449062 CHRNA6Q15825 494 aa13.9□□□□□ -0.18
RTFDC1-204ENST00000449062 TBC1D25Q3MII6 688 aa13.9□□□□□ -0.18
RTFDC1-204ENST00000449062 ZDHHC20Q5W0Z9 365 aa13.9□□□□□ -0.18
RTFDC1-204ENST00000449062 SLC13A5Q86YT5 568 aaPredicted RBP13.9□□□□□ -0.18
RTFDC1-204ENST00000449062 SLITRK4Q8IW52 837 aa13.9□□□□□ -0.18
RTFDC1-204ENST00000449062 LSMEM2Q8N112 164 aa13.9□□□□□ -0.18
RTFDC1-204ENST00000449062 BRSK1Q8TDC3 778 aa13.9□□□□□ -0.18
RTFDC1-204ENST00000449062 LIN37Q96GY3 246 aaPredicted RBP13.9□□□□□ -0.18
RTFDC1-204ENST00000449062 C19orf43Q9BQ61 176 aa13.9□□□□□ -0.18
RTFDC1-204ENST00000449062 TMEM121Q9BTD3 319 aa13.9□□□□□ -0.18
RTFDC1-204ENST00000449062 TLR10Q9BXR5 811 aa13.9□□□□□ -0.18
RTFDC1-204ENST00000449062 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.9□□□□□ -0.18
RTFDC1-204ENST00000449062 ATXN7L1Q9ULK2 861 aaPredicted RBP13.9□□□□□ -0.18
RTFDC1-204ENST00000449062 PCDHGA8Q9Y5G5 932 aa13.9□□□□□ -0.18
RTFDC1-204ENST00000449062 ARL5AQ9Y689 179 aa13.9□□□□□ -0.18
RTFDC1-204ENST00000449062 MGAQ8IWI9 3026 aa13.89□□□□□ -0.19
RTFDC1-204ENST00000449062 TRBV23OR9-2A0A075B6M9 112 aa13.89□□□□□ -0.19
RTFDC1-204ENST00000449062 AGAP14A8MT82 685 aa13.89□□□□□ -0.19
RTFDC1-204ENST00000449062 MTX2O75431 263 aa13.89□□□□□ -0.19
RTFDC1-204ENST00000449062 STK10O94804 968 aaKnown RBP13.89□□□□□ -0.19
RTFDC1-204ENST00000449062 SLC4A1P02730 911 aa13.89□□□□□ -0.19
RTFDC1-204ENST00000449062 ACP5P13686 325 aa13.89□□□□□ -0.19
RTFDC1-204ENST00000449062 LPOP22079 712 aaPredicted RBP13.89□□□□□ -0.19
RTFDC1-204ENST00000449062 PSMA3P25788 255 aa13.89□□□□□ -0.19
RTFDC1-204ENST00000449062 STIP1P31948 543 aaKnown RBP13.89□□□□□ -0.19
RTFDC1-204ENST00000449062 GABREP78334 506 aa13.89□□□□□ -0.19
RTFDC1-204ENST00000449062 TMEM115Q12893 351 aaPredicted RBP13.89□□□□□ -0.19
RTFDC1-204ENST00000449062 PRPSAP1Q14558 356 aa13.89□□□□□ -0.19
RTFDC1-204ENST00000449062 RPS6KA1Q15418 735 aa13.89□□□□□ -0.19
RTFDC1-204ENST00000449062 TAF1AQ15573 450 aaPredicted RBP13.89□□□□□ -0.19
RTFDC1-204ENST00000449062 GLT6D1Q7Z4J2 308 aa13.89□□□□□ -0.19
RTFDC1-204ENST00000449062 WDR36Q8NI36 951 aaKnown RBP13.89□□□□□ -0.19
RTFDC1-204ENST00000449062 SLC37A2Q8TED4 501 aa13.89□□□□□ -0.19
RTFDC1-204ENST00000449062 ATG4AQ8WYN0 398 aa13.89□□□□□ -0.19
RTFDC1-204ENST00000449062 ZNF578Q96N58 590 aaPredicted RBP13.89□□□□□ -0.19
RTFDC1-204ENST00000449062 FSD1LQ9BXM9 530 aa13.89□□□□□ -0.19
RTFDC1-204ENST00000449062 SATB2Q9UPW6 733 aa13.89□□□□□ -0.19
RTFDC1-204ENST00000449062 KCNK6Q9Y257 313 aa13.89□□□□□ -0.19
RTFDC1-204ENST00000449062 SSUH2Q9Y2M2 353 aa13.89□□□□□ -0.19
RTFDC1-204ENST00000449062 IGHV1OR21-1A0A087WYE8 117 aa13.88□□□□□ -0.19
RTFDC1-204ENST00000449062 CCDC187A0A096LP49 1063 aa13.88□□□□□ -0.19
RTFDC1-204ENST00000449062 RHPN2P1A8MT19 583 aa13.88□□□□□ -0.19
RTFDC1-204ENST00000449062 CDRT15L2A8MXV6 281 aa13.88□□□□□ -0.19
RTFDC1-204ENST00000449062 TMX2-CTNND1H3BSU7 103 aa13.88□□□□□ -0.19
RTFDC1-204ENST00000449062 STX7O15400 261 aaKnown RBP13.88□□□□□ -0.19
RTFDC1-204ENST00000449062 GPR39O43194 453 aa13.88□□□□□ -0.19
RTFDC1-204ENST00000449062 LDB2O43679 373 aa13.88□□□□□ -0.19
RTFDC1-204ENST00000449062 LIASO43766 372 aa13.88□□□□□ -0.19
RTFDC1-204ENST00000449062 CDK14O94921 469 aa13.88□□□□□ -0.19
RTFDC1-204ENST00000449062 CCDC175P0C221 793 aa13.88□□□□□ -0.19
RTFDC1-204ENST00000449062 HOXB3P14651 431 aaPredicted RBP13.88□□□□□ -0.19
RTFDC1-204ENST00000449062 ZNF7P17097 686 aaPredicted RBP13.88□□□□□ -0.19
RTFDC1-204ENST00000449062 ACTN2P35609 894 aa13.88□□□□□ -0.19
RTFDC1-204ENST00000449062 SPAM1P38567 509 aa13.88□□□□□ -0.19
RTFDC1-204ENST00000449062 ERVPABLB-1P60509 514 aa13.88□□□□□ -0.19
RTFDC1-204ENST00000449062 CLPPQ16740 277 aaPredicted RBP13.88□□□□□ -0.19
RTFDC1-204ENST00000449062 USP53Q70EK8 1073 aa13.88□□□□□ -0.19
RTFDC1-204ENST00000449062 PHYKPLQ8IUZ5 450 aa13.88□□□□□ -0.19
RTFDC1-204ENST00000449062 RASGEF1AQ8N9B8 481 aa13.88□□□□□ -0.19
RTFDC1-204ENST00000449062 DDHD1Q8NEL9 900 aa13.88□□□□□ -0.19
RTFDC1-204ENST00000449062 ZNF398Q8TD17 642 aa13.88□□□□□ -0.19
RTFDC1-204ENST00000449062 PPP1R2P1Q96PQ5 205 aa13.88□□□□□ -0.19
RTFDC1-204ENST00000449062 TBL1YQ9BQ87 522 aa13.88□□□□□ -0.19
RTFDC1-204ENST00000449062 FRMD8P1Q9BZ68 369 aaPredicted RBP13.88□□□□□ -0.19
RTFDC1-204ENST00000449062 FOXP3Q9BZS1 431 aa13.88□□□□□ -0.19
RTFDC1-204ENST00000449062 SEMA6CQ9H3T2 930 aa13.88□□□□□ -0.19
RTFDC1-204ENST00000449062 SARS2Q9NP81 518 aaKnown RBP13.88□□□□□ -0.19
RTFDC1-204ENST00000449062 LZTFL1Q9NQ48 299 aa13.88□□□□□ -0.19
RTFDC1-204ENST00000449062 PRDM8Q9NQV8 689 aa13.88□□□□□ -0.19
RTFDC1-204ENST00000449062 KLC4Q9NSK0 619 aa13.88□□□□□ -0.19
RTFDC1-204ENST00000449062 SMOXQ9NWM0 555 aa13.88□□□□□ -0.19
RTFDC1-204ENST00000449062 SCHIP1Q9P0W5 487 aaPredicted RBP13.88□□□□□ -0.19
RTFDC1-204ENST00000449062 PDP2Q9P2J9 529 aa13.88□□□□□ -0.19
RTFDC1-204ENST00000449062 GLYATL1P3A0A0U1RQE8 302 aa13.87□□□□□ -0.19
RTFDC1-204ENST00000449062 C2orf81A6NN90 581 aa13.87□□□□□ -0.19
RTFDC1-204ENST00000449062 KMOO15229 486 aa13.87□□□□□ -0.19
RTFDC1-204ENST00000449062 CPNE6O95741 557 aa13.87□□□□□ -0.19
RTFDC1-204ENST00000449062 F3P13726 295 aa13.87□□□□□ -0.19
RTFDC1-204ENST00000449062 BRAFP15056 766 aa13.87□□□□□ -0.19
RTFDC1-204ENST00000449062 XRCC1P18887 633 aaPredicted RBP13.87□□□□□ -0.19
RTFDC1-204ENST00000449062 ITPKBP27987 946 aa13.87□□□□□ -0.19
RTFDC1-204ENST00000449062 ALDH4A1P30038 563 aa13.87□□□□□ -0.19
RTFDC1-204ENST00000449062 TNNT3P45378 269 aaPredicted RBP13.87□□□□□ -0.19
RTFDC1-204ENST00000449062 ZNF140P52738 457 aaPredicted RBP13.87□□□□□ -0.19
RTFDC1-204ENST00000449062 CTSCP53634 463 aa13.87□□□□□ -0.19
RTFDC1-204ENST00000449062 INHBCP55103 352 aa13.87□□□□□ -0.19
RTFDC1-204ENST00000449062 UBE2IP63279 158 aaKnown RBP13.87□□□□□ -0.19
RTFDC1-204ENST00000449062 GPRC6AQ5T6X5 926 aa13.87□□□□□ -0.19
RTFDC1-204ENST00000449062 C19orf48Q6RUI8 117 aa13.87□□□□□ -0.19
RTFDC1-204ENST00000449062 ABRAXAS1Q6UWZ7 409 aa13.87□□□□□ -0.19
RTFDC1-204ENST00000449062 XKR5Q6UX68 686 aa13.87□□□□□ -0.19
RTFDC1-204ENST00000449062 FAM151BQ6UXP7 276 aa13.87□□□□□ -0.19
RTFDC1-204ENST00000449062 WASH2PQ6VEQ5 465 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms