RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 ATP13A5Q4VNC0 1218 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 LDLRAP1Q5SW96 308 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 MTFR2Q6P444 385 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 KLHDC10Q6PID8 442 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 CCDC137Q6PK04 289 aaKnown RBP5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 ZNF783Q6ZMS7 281 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 COMMD2Q86X83 199 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 PHF13Q86YI8 300 aaPredicted RBP5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 FNIP1Q8TF40 1166 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 REPS1Q96D71 796 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 ZNF599Q96NL3 588 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 QRFPRQ96P65 431 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 SCNM1Q9BWG6 230 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 RAB11FIP5Q9BXF6 653 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 RCOR3Q9P2K3 495 aaPredicted RBP5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 NDRG3Q9UGV2 375 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 PADI1Q9ULC6 663 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 SIK3Q9Y2K2 1263 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 HYKKA2RU49 373 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 TNFSF14O43557 240 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 LEFTY1O75610 366 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 PRAMEF12O95522 483 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 TTC4O95801 387 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 RPLP0P05388 317 aaKnown RBP5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 DRD2P14416 443 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 DRD4P21917 467 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 IL12BP29460 328 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 VIPR1P32241 457 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 GUCY2DQ02846 1103 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 KCNMA1Q12791 1236 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 MPP3Q13368 585 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 SNX30Q5VWJ9 437 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 SP7Q8TDD2 431 aaPredicted RBP5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 SEMA4DQ92854 862 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 CHRDQ9H2X0 955 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 A0A1B0GTH6 734 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 WNT7AO00755 349 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 BUD23O43709 281 aaKnown RBP5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 TARSP26639 723 aaKnown RBP5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 IL12RB1P42701 662 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 ASPAP45381 313 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 AFTPHQ6ULP2 937 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 FAM92BQ6ZTR7 304 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 HTR3DQ70Z44 454 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 ZBED8Q8IZ13 594 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 ESX1Q8N693 406 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 FIBINQ8TAL6 211 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 FAM107BQ9H098 131 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 ABCG8Q9H221 673 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 ARFGAP3Q9NP61 516 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 EPS15L1Q9UBC2 864 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 TRPC4Q9UBN4 977 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 SIX4Q9UIU6 781 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 PCDHGC3Q9UN70 934 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 COPG1Q9Y678 874 aaKnown RBP5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 USP54Q70EL1 1684 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 RREB1Q92766 1687 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 A0A0J9YVX5 310 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 BTBD17A6NE02 478 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 HNRNPCL2B2RXH8 293 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 STMND1H3BQB6 276 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 HNRNPCL1O60812 293 aaKnown RBP5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 SERPINI2O75830 405 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 IPO13O94829 963 aaKnown RBP5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 TSHRP16473 764 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 WNT3AP56704 352 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 ADCY2Q08462 1091 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 FAM83EQ2M2I3 478 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 KIF19Q2TAC6 998 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 TMEM220Q6QAJ8 160 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 C17orf64Q86WR6 236 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 SLC44A2Q8IWA5 706 aaPredicted RBP5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 KIRREL3Q8IZU9 778 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 NXPE1Q8N323 547 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 DNAJB14Q8TBM8 379 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 IPCEF1Q8WWN9 437 aaPredicted RBP5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 CPT1BQ92523 772 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 ZNF641Q96N77 438 aaPredicted RBP5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 ZNF395Q9H8N7 513 aaPredicted RBP5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 ANLNQ9NQW6 1124 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 ARL15Q9NXU5 204 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 XPO7Q9UIA9 1087 aaKnown RBP5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 ANKRD6Q9Y2G4 727 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 TIAM2Q8IVF5 1701 aa5.59□□□□□ -1.52
CDC42BPA-209ENST00000448940 NCF2P19878 526 aaPredicted RBP5.59□□□□□ -1.52
CDC42BPA-209ENST00000448940 PSMA4P25789 261 aaKnown RBP5.59□□□□□ -1.52
CDC42BPA-209ENST00000448940 SLC6A11P48066 632 aa5.59□□□□□ -1.52
CDC42BPA-209ENST00000448940 ARCN1P48444 511 aaKnown RBP5.59□□□□□ -1.52
CDC42BPA-209ENST00000448940 SESN3P58005 492 aa5.59□□□□□ -1.52
CDC42BPA-209ENST00000448940 FAM214AQ32MH5 1076 aa5.59□□□□□ -1.52
CDC42BPA-209ENST00000448940 GAREM2Q75VX8 874 aa5.59□□□□□ -1.52
CDC42BPA-209ENST00000448940 SLC29A4Q7RTT9 530 aa5.59□□□□□ -1.52
CDC42BPA-209ENST00000448940 SLC35F6Q8N357 371 aa5.59□□□□□ -1.52
CDC42BPA-209ENST00000448940 FBF1Q8TES7 1133 aa5.59□□□□□ -1.52
CDC42BPA-209ENST00000448940 LINC01599Q8WXQ3 324 aa5.59□□□□□ -1.52
CDC42BPA-209ENST00000448940 LRIT1Q9P2V4 623 aa5.59□□□□□ -1.52
CDC42BPA-209ENST00000448940 GNG14A0A1W2PPG7 69 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 OR2AG2A6NM03 316 aa5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 UBFD1O14562 309 aaKnown RBP5.58□□□□□ -1.52
CDC42BPA-209ENST00000448940 KMOO15229 486 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms