RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 CLPBQ9H078 707 aa17.55■□□□□ 0.4
LMNA-208ENST00000448611 B4GALT6Q9UBX8 382 aa17.55■□□□□ 0.4
LMNA-208ENST00000448611 RNF112Q9ULX5 631 aa17.55■□□□□ 0.4
LMNA-208ENST00000448611 CDYLQ9Y232 598 aa17.55■□□□□ 0.4
LMNA-208ENST00000448611 SLC27A6Q9Y2P4 619 aa17.55■□□□□ 0.4
LMNA-208ENST00000448611 DHRS7Q9Y394 339 aa17.55■□□□□ 0.4
LMNA-208ENST00000448611 CCDC189A1A4V9 331 aa17.55■□□□□ 0.4
LMNA-208ENST00000448611 NPEPPSL1A6NEC2 478 aa17.55■□□□□ 0.4
LMNA-208ENST00000448611 B2RBV5 119 aa17.55■□□□□ 0.4
LMNA-208ENST00000448611 SPECC1L-ADORA2AF8WAN1 911 aa17.55■□□□□ 0.4
LMNA-208ENST00000448611 NEMP1O14524 444 aa17.55■□□□□ 0.4
LMNA-208ENST00000448611 ECI2O75521 394 aa17.55■□□□□ 0.4
LMNA-208ENST00000448611 NNMTP40261 264 aa17.55■□□□□ 0.4
LMNA-208ENST00000448611 POLR2LP62875 67 aaKnown RBP17.55■□□□□ 0.4
LMNA-208ENST00000448611 LRIT3Q3SXY7 679 aa17.55■□□□□ 0.4
LMNA-208ENST00000448611 BRAT1Q6PJG6 821 aa17.55■□□□□ 0.4
LMNA-208ENST00000448611 ACAD11Q709F0 780 aa17.55■□□□□ 0.4
LMNA-208ENST00000448611 ETFBKMTQ8IXQ9 262 aa17.55■□□□□ 0.4
LMNA-208ENST00000448611 NXPE1Q8N323 547 aa17.55■□□□□ 0.4
LMNA-208ENST00000448611 FBXO27Q8NI29 283 aa17.55■□□□□ 0.4
LMNA-208ENST00000448611 WFIKKN2Q8TEU8 576 aa17.55■□□□□ 0.4
LMNA-208ENST00000448611 FGF13Q92913 245 aa17.55■□□□□ 0.4
LMNA-208ENST00000448611 FAR2Q96K12 515 aa17.55■□□□□ 0.4
LMNA-208ENST00000448611 CCDC28BQ9BUN5 200 aa17.55■□□□□ 0.4
LMNA-208ENST00000448611 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.55■□□□□ 0.47e-7■■□□□ 13.7
LMNA-208ENST00000448611 CRLS1Q9UJA2 301 aa17.55■□□□□ 0.4
LMNA-208ENST00000448611 PRSS21Q9Y6M0 314 aa17.55■□□□□ 0.4
LMNA-208ENST00000448611 C2orf16Q68DN1 1984 aa17.54■□□□□ 0.4
LMNA-208ENST00000448611 EPOPA6NHQ4 379 aa17.54■□□□□ 0.4
LMNA-208ENST00000448611 TRPC5OSA6NMA1 111 aa17.54■□□□□ 0.4
LMNA-208ENST00000448611 SYCE1LA8MT33 242 aa17.54■□□□□ 0.4
LMNA-208ENST00000448611 BTN3A1O00481 513 aa17.54■□□□□ 0.4
LMNA-208ENST00000448611 DCXO43602 365 aa17.54■□□□□ 0.4
LMNA-208ENST00000448611 KLK8O60259 260 aa17.54■□□□□ 0.4
LMNA-208ENST00000448611 TULP3O75386 442 aa17.54■□□□□ 0.4
LMNA-208ENST00000448611 LEFTY1O75610 366 aa17.54■□□□□ 0.4
LMNA-208ENST00000448611 SIX3O95343 332 aaPredicted RBP17.54■□□□□ 0.4
LMNA-208ENST00000448611 SRPRAP08240 638 aaKnown RBP17.54■□□□□ 0.4
LMNA-208ENST00000448611 C1SP09871 688 aa17.54■□□□□ 0.4
LMNA-208ENST00000448611 ARSAP15289 507 aa17.54■□□□□ 0.4
LMNA-208ENST00000448611 FSHRP23945 695 aa17.54■□□□□ 0.4
LMNA-208ENST00000448611 LRRC73Q5JTD7 316 aa17.54■□□□□ 0.4
LMNA-208ENST00000448611 PTRHD1Q6GMV3 140 aaKnown RBP17.54■□□□□ 0.4
LMNA-208ENST00000448611 RAB44Q7Z6P3 723 aaPredicted RBP17.54■□□□□ 0.4
LMNA-208ENST00000448611 RBM15BQ8NDT2 890 aaKnown RBP17.54■□□□□ 0.4
LMNA-208ENST00000448611 FAM13CQ8NE31 585 aa17.54■□□□□ 0.4
LMNA-208ENST00000448611 SMARCD2Q92925 531 aa17.54■□□□□ 0.4
LMNA-208ENST00000448611 SARS2Q9NP81 518 aaKnown RBP17.54■□□□□ 0.4
LMNA-208ENST00000448611 GNPTGQ9UJJ9 305 aa17.54■□□□□ 0.4
LMNA-208ENST00000448611 TSPAN11A1L157 253 aa17.53■□□□□ 0.4
LMNA-208ENST00000448611 LRRC14BA6NHZ5 514 aa17.53■□□□□ 0.4
LMNA-208ENST00000448611 GOLGA8CPA6NN73 597 aa17.53■□□□□ 0.4
LMNA-208ENST00000448611 SUPT3HB4E1H0 165 aa17.53■□□□□ 0.4
LMNA-208ENST00000448611 SUPT3HO75486 399 aa17.53■□□□□ 0.4
LMNA-208ENST00000448611 ASLP04424 464 aa17.53■□□□□ 0.4
LMNA-208ENST00000448611 CTSLP07711 333 aa17.53■□□□□ 0.4
LMNA-208ENST00000448611 GFAPP14136 432 aa17.53■□□□□ 0.4
LMNA-208ENST00000448611 GAB4Q2WGN9 574 aa17.53■□□□□ 0.4
LMNA-208ENST00000448611 RFLNAQ6ZTI6 216 aa17.53■□□□□ 0.4
LMNA-208ENST00000448611 TMPRSS6Q8IU80 811 aa17.53■□□□□ 0.4
LMNA-208ENST00000448611 FBXO39Q8N4B4 442 aa17.53■□□□□ 0.4
LMNA-208ENST00000448611 NAT14Q8WUY8 206 aa17.53■□□□□ 0.4
LMNA-208ENST00000448611 PDLIM5Q96HC4 596 aaKnown RBP17.53■□□□□ 0.4
LMNA-208ENST00000448611 ZFYVE19Q96K21 471 aa17.53■□□□□ 0.4
LMNA-208ENST00000448611 PLEKHG4BQ96PX9 1271 aa17.53■□□□□ 0.4
LMNA-208ENST00000448611 MTG2Q9H4K7 406 aa17.53■□□□□ 0.4
LMNA-208ENST00000448611 ZNF385DQ9H6B1 395 aa17.53■□□□□ 0.4
LMNA-208ENST00000448611 SDHDO14521 159 aa17.53■□□□□ 0.4
LMNA-208ENST00000448611 TSPAN8P19075 237 aa17.53■□□□□ 0.4
LMNA-208ENST00000448611 CDH13P55290 713 aa17.53■□□□□ 0.4
LMNA-208ENST00000448611 BTKQ06187 659 aa17.53■□□□□ 0.4
LMNA-208ENST00000448611 SNCBQ16143 134 aa17.53■□□□□ 0.4
LMNA-208ENST00000448611 ARSIQ5FYB1 569 aa17.53■□□□□ 0.4
LMNA-208ENST00000448611 RARS2Q5T160 578 aaKnown RBP17.53■□□□□ 0.4
LMNA-208ENST00000448611 MACC1Q6ZN28 852 aa17.53■□□□□ 0.4
LMNA-208ENST00000448611 KIRREL3Q8IZU9 778 aa17.53■□□□□ 0.4
LMNA-208ENST00000448611 CPSF7Q8N684 471 aaKnown RBP17.53■□□□□ 0.4
LMNA-208ENST00000448611 CLDN19Q8N6F1 224 aa17.53■□□□□ 0.4
LMNA-208ENST00000448611 LKAAEAR1Q8TD35 194 aa17.53■□□□□ 0.4
LMNA-208ENST00000448611 PBXIP1Q96AQ6 731 aa17.53■□□□□ 0.4
LMNA-208ENST00000448611 CDCA3Q99618 268 aaPredicted RBP17.53■□□□□ 0.4
LMNA-208ENST00000448611 EBF3Q9H4W6 596 aa17.53■□□□□ 0.4
LMNA-208ENST00000448611 DZANK1Q9NVP4 752 aa17.53■□□□□ 0.4
LMNA-208ENST00000448611 BAIAP2L1Q9UHR4 511 aa17.53■□□□□ 0.4
LMNA-208ENST00000448611 SLC8A2Q9UPR5 921 aa17.53■□□□□ 0.4
LMNA-208ENST00000448611 PRRC2BQ5JSZ5 2229 aaKnown RBP17.52■□□□□ 0.4
LMNA-208ENST00000448611 OTOL1A6NHN0 477 aaPredicted RBP17.52■□□□□ 0.4
LMNA-208ENST00000448611 NFATC1O95644 943 aa17.52■□□□□ 0.4
LMNA-208ENST00000448611 SPINT3P49223 89 aa17.52■□□□□ 0.4
LMNA-208ENST00000448611 SATB1Q01826 763 aa17.52■□□□□ 0.4
LMNA-208ENST00000448611 MESP2Q0VG99 397 aa17.52■□□□□ 0.4
LMNA-208ENST00000448611 KLF10Q13118 480 aa17.52■□□□□ 0.4
LMNA-208ENST00000448611 NAA25Q14CX7 972 aa17.52■□□□□ 0.4
LMNA-208ENST00000448611 ZDHHC20Q5W0Z9 365 aa17.52■□□□□ 0.4
LMNA-208ENST00000448611 AFAP1L2Q8N4X5 818 aa17.52■□□□□ 0.4
LMNA-208ENST00000448611 ASB2Q96Q27 587 aa17.52■□□□□ 0.4
LMNA-208ENST00000448611 C1QTNF3Q9BXJ4 246 aa17.52■□□□□ 0.4
LMNA-208ENST00000448611 C1orf21Q9H246 121 aa17.52■□□□□ 0.4
LMNA-208ENST00000448611 MEAF6Q9HAF1 191 aa17.52■□□□□ 0.4
LMNA-208ENST00000448611 CDH22Q9UJ99 828 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms