RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 MT-ND3P03897 115 aa19.33■□□□□ 0.69
SGCE-207ENST00000447873 IGHV4-34P06331 123 aa19.33■□□□□ 0.69
SGCE-207ENST00000447873 MSH3P20585 1137 aa19.33■□□□□ 0.69
SGCE-207ENST00000447873 HNRNPA2B1P22626 353 aaKnown RBP19.33■□□□□ 0.69
SGCE-207ENST00000447873 TEAD1P28347 426 aa19.33■□□□□ 0.69
SGCE-207ENST00000447873 RBM20Q5T481 1227 aaKnown RBP19.33■□□□□ 0.69
SGCE-207ENST00000447873 AGBL2Q5U5Z8 902 aa19.33■□□□□ 0.69
SGCE-207ENST00000447873 KCTD16Q68DU8 428 aa19.33■□□□□ 0.69
SGCE-207ENST00000447873 ZNF549Q6P9A3 640 aa19.33■□□□□ 0.69
SGCE-207ENST00000447873 BMP8AQ7Z5Y6 402 aa19.33■□□□□ 0.69
SGCE-207ENST00000447873 HEATR4Q86WZ0 1026 aa19.33■□□□□ 0.69
SGCE-207ENST00000447873 DTWD2Q8NBA8 298 aa19.33■□□□□ 0.69
SGCE-207ENST00000447873 DENND6BQ8NEG7 585 aa19.33■□□□□ 0.69
SGCE-207ENST00000447873 MZB1Q8WU39 189 aa19.33■□□□□ 0.69
SGCE-207ENST00000447873 BIRC7Q96CA5 298 aa19.33■□□□□ 0.69
SGCE-207ENST00000447873 HIC2Q96JB3 615 aa19.33■□□□□ 0.69
SGCE-207ENST00000447873 MYOCQ99972 504 aa19.33■□□□□ 0.69
SGCE-207ENST00000447873 P2RY12Q9H244 342 aa19.33■□□□□ 0.69
SGCE-207ENST00000447873 NOVA2Q9UNW9 492 aaKnown RBP19.33■□□□□ 0.69
SGCE-207ENST00000447873 PCDHB1Q9Y5F3 818 aa19.33■□□□□ 0.69
SGCE-207ENST00000447873 IGLV3-16A0A075B6K0 115 aa19.32■□□□□ 0.68
SGCE-207ENST00000447873 FOXO6A8MYZ6 492 aa19.32■□□□□ 0.68
SGCE-207ENST00000447873 MAP3K13O43283 966 aa19.32■□□□□ 0.68
SGCE-207ENST00000447873 POLD2P49005 469 aa19.32■□□□□ 0.68
SGCE-207ENST00000447873 SLC12A2P55011 1212 aa19.32■□□□□ 0.68
SGCE-207ENST00000447873 POU4F1Q01851 419 aa19.32■□□□□ 0.68
SGCE-207ENST00000447873 RPL6Q02878 288 aaKnown RBP19.32■□□□□ 0.68
SGCE-207ENST00000447873 DNAJC3Q13217 504 aa19.32■□□□□ 0.68
SGCE-207ENST00000447873 USP10Q14694 798 aaKnown RBP19.32■□□□□ 0.68
SGCE-207ENST00000447873 HECTD2Q5U5R9 776 aa19.32■□□□□ 0.68
SGCE-207ENST00000447873 SLC41A1Q8IVJ1 513 aa19.32■□□□□ 0.68
SGCE-207ENST00000447873 CLDN19Q8N6F1 224 aa19.32■□□□□ 0.68
SGCE-207ENST00000447873 ACVR1CQ8NER5 493 aa19.32■□□□□ 0.68
SGCE-207ENST00000447873 CCDC97Q96F63 343 aaPredicted RBP19.32■□□□□ 0.68
SGCE-207ENST00000447873 ATP6V1G3Q96LB4 118 aa19.32■□□□□ 0.68
SGCE-207ENST00000447873 BIRC8Q96P09 236 aa19.32■□□□□ 0.68
SGCE-207ENST00000447873 AARSD1Q9BTE6 412 aaKnown RBP19.32■□□□□ 0.68
SGCE-207ENST00000447873 PCED1AQ9H1Q7 454 aa19.32■□□□□ 0.68
SGCE-207ENST00000447873 WDR26Q9H7D7 661 aa19.32■□□□□ 0.68
SGCE-207ENST00000447873 CAB39LQ9H9S4 337 aa19.32■□□□□ 0.68
SGCE-207ENST00000447873 MBD1Q9UIS9 605 aaPredicted RBP19.32■□□□□ 0.68
SGCE-207ENST00000447873 GNPTGQ9UJJ9 305 aa19.32■□□□□ 0.68
SGCE-207ENST00000447873 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.32■□□□□ 0.68
SGCE-207ENST00000447873 VWA7Q9Y334 891 aa19.32■□□□□ 0.68
SGCE-207ENST00000447873 COMMD10Q9Y6G5 202 aa19.32■□□□□ 0.68
SGCE-207ENST00000447873 PIKFYVEQ9Y2I7 2098 aa19.32■□□□□ 0.68
SGCE-207ENST00000447873 A0A1W2PPM1 405 aa19.32■□□□□ 0.68
SGCE-207ENST00000447873 FPGTO14772 594 aa19.32■□□□□ 0.68
SGCE-207ENST00000447873 TDGF1P13385 188 aa19.32■□□□□ 0.68
SGCE-207ENST00000447873 ATP1B2P14415 290 aaPredicted RBP19.32■□□□□ 0.68
SGCE-207ENST00000447873 PKMP14618 531 aaKnown RBP19.32■□□□□ 0.68
SGCE-207ENST00000447873 RPS3P23396 243 aaKnown RBP eCLIP19.32■□□□□ 0.68
SGCE-207ENST00000447873 TYK2P29597 1187 aa19.32■□□□□ 0.68
SGCE-207ENST00000447873 AKT2P31751 481 aa19.32■□□□□ 0.68
SGCE-207ENST00000447873 IGFALSP35858 605 aa19.32■□□□□ 0.68
SGCE-207ENST00000447873 TRIM23P36406 574 aa19.32■□□□□ 0.68
SGCE-207ENST00000447873 NUDT1P36639 197 aa19.32■□□□□ 0.68
SGCE-207ENST00000447873 FNTBP49356 437 aa19.32■□□□□ 0.68
SGCE-207ENST00000447873 SERPINB8P50452 374 aa19.32■□□□□ 0.68
SGCE-207ENST00000447873 CDK3Q00526 305 aa19.32■□□□□ 0.68
SGCE-207ENST00000447873 B4GALNT1Q00973 533 aa19.32■□□□□ 0.68
SGCE-207ENST00000447873 CSTF1Q05048 431 aaKnown RBP19.32■□□□□ 0.68
SGCE-207ENST00000447873 TTMPQ5BVD1 217 aa19.32■□□□□ 0.68
SGCE-207ENST00000447873 TNFAIP8L3Q5GJ75 292 aa19.32■□□□□ 0.68
SGCE-207ENST00000447873 ZNF648Q5T619 568 aaPredicted RBP19.32■□□□□ 0.68
SGCE-207ENST00000447873 PTRHD1Q6GMV3 140 aaKnown RBP19.32■□□□□ 0.68
SGCE-207ENST00000447873 FAM45BPQ6NSW5 357 aa19.32■□□□□ 0.68
SGCE-207ENST00000447873 SLC36A4Q6YBV0 504 aa19.32■□□□□ 0.68
SGCE-207ENST00000447873 TIFABQ6ZNK6 161 aa19.32■□□□□ 0.68
SGCE-207ENST00000447873 TRIM74Q86UV6 250 aa19.32■□□□□ 0.68
SGCE-207ENST00000447873 TRABD2AQ86V40 505 aa19.32■□□□□ 0.68
SGCE-207ENST00000447873 SRRM1Q8IYB3 904 aaKnown RBP19.32■□□□□ 0.68
SGCE-207ENST00000447873 CADM4Q8NFZ8 388 aa19.32■□□□□ 0.68
SGCE-207ENST00000447873 FAM45AQ8TCE6 357 aa19.32■□□□□ 0.68
SGCE-207ENST00000447873 SNX19Q92543 992 aa19.32■□□□□ 0.68
SGCE-207ENST00000447873 TEX101Q9BY14 249 aa19.32■□□□□ 0.68
SGCE-207ENST00000447873 ZCCHC2Q9C0B9 1178 aaKnown RBP19.32■□□□□ 0.68
SGCE-207ENST00000447873 DMTF1Q9Y222 760 aa19.32■□□□□ 0.68
SGCE-207ENST00000447873 CEP192Q8TEP8 1941 aa19.31■□□□□ 0.68
SGCE-207ENST00000447873 TPP1O14773 563 aa19.31■□□□□ 0.68
SGCE-207ENST00000447873 ALDOAP04075 364 aaKnown RBP19.31■□□□□ 0.68
SGCE-207ENST00000447873 TMEM115Q12893 351 aaPredicted RBP19.31■□□□□ 0.68
SGCE-207ENST00000447873 KHDC1Q4VXA5 237 aaKnown RBP19.31■□□□□ 0.68
SGCE-207ENST00000447873 CTSL3PQ5NE16 218 aa19.31■□□□□ 0.68
SGCE-207ENST00000447873 DEFB119Q8N690 84 aa19.31■□□□□ 0.68
SGCE-207ENST00000447873 NAT14Q8WUY8 206 aa19.31■□□□□ 0.68
SGCE-207ENST00000447873 TSPAN17Q96FV3 270 aa19.31■□□□□ 0.68
SGCE-207ENST00000447873 COX14Q96I36 57 aa19.31■□□□□ 0.68
SGCE-207ENST00000447873 EPHX3Q9H6B9 360 aa19.31■□□□□ 0.68
SGCE-207ENST00000447873 EBF2Q9HAK2 575 aa19.31■□□□□ 0.68
SGCE-207ENST00000447873 TRIM39Q9HCM9 518 aa19.31■□□□□ 0.68
SGCE-207ENST00000447873 PHPT1Q9NRX4 125 aaPredicted RBP19.31■□□□□ 0.68
SGCE-207ENST00000447873 SENP1Q9P0U3 644 aa19.31■□□□□ 0.68
SGCE-207ENST00000447873 OR1A2Q9Y585 309 aa19.31■□□□□ 0.68
SGCE-207ENST00000447873 PRSS21Q9Y6M0 314 aa19.31■□□□□ 0.68
SGCE-207ENST00000447873 METTL12A8MUP2 240 aa19.3■□□□□ 0.68
SGCE-207ENST00000447873 HMGB1P1B2RPK0 211 aaPredicted RBP19.3■□□□□ 0.68
SGCE-207ENST00000447873 PRAMEF26H0Y7S4 382 aa19.3■□□□□ 0.68
SGCE-207ENST00000447873 H3BMM5 538 aa19.3■□□□□ 0.68
SGCE-207ENST00000447873 RFPL1O75677 317 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms