RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 TYSND1Q2T9J0 566 aa4.47□□□□□ -1.69
HMGB1P48-201ENST00000446155 SMU1Q2TAY7 513 aa4.47□□□□□ -1.69
HMGB1P48-201ENST00000446155 C2orf76Q3KRA6 126 aa4.47□□□□□ -1.69
HMGB1P48-201ENST00000446155 DNTTIP2Q5QJE6 756 aaKnown RBP4.47□□□□□ -1.69
HMGB1P48-201ENST00000446155 PRAMEF19Q5SWL8 479 aa4.47□□□□□ -1.69
HMGB1P48-201ENST00000446155 OTUD1Q5VV17 481 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P48-201ENST00000446155 DAB2IPQ5VWQ8 1189 aa4.47□□□□□ -1.69
HMGB1P48-201ENST00000446155 LRRC8EQ6NSJ5 796 aa4.47□□□□□ -1.69
HMGB1P48-201ENST00000446155 CPLX2Q6PUV4 134 aaKnown RBP4.47□□□□□ -1.69
HMGB1P48-201ENST00000446155 DLK2Q6UY11 383 aa4.47□□□□□ -1.69
HMGB1P48-201ENST00000446155 SEPT14Q6ZU15 432 aa4.47□□□□□ -1.69
HMGB1P48-201ENST00000446155 MON1BQ7L1V2 547 aa4.47□□□□□ -1.69
HMGB1P48-201ENST00000446155 OTOAQ7RTW8 1153 aa4.47□□□□□ -1.69
HMGB1P48-201ENST00000446155 PI4KAP1Q8N8J0 262 aa4.47□□□□□ -1.69
HMGB1P48-201ENST00000446155 PRR26Q8N8Z3 221 aa4.47□□□□□ -1.69
HMGB1P48-201ENST00000446155 HJURPQ8NCD3 748 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P48-201ENST00000446155 PTPMT1Q8WUK0 201 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P48-201ENST00000446155 KCNE4Q8WWG9 221 aa4.47□□□□□ -1.69
HMGB1P48-201ENST00000446155 HDAC11Q96DB2 347 aa4.47□□□□□ -1.69
HMGB1P48-201ENST00000446155 BBS4Q96RK4 519 aa4.47□□□□□ -1.69
HMGB1P48-201ENST00000446155 DCLK3Q9C098 648 aa4.47□□□□□ -1.69
HMGB1P48-201ENST00000446155 DDX4Q9NQI0 724 aaKnown RBP4.47□□□□□ -1.69
HMGB1P48-201ENST00000446155 CHCHD3Q9NX63 227 aaKnown RBP4.47□□□□□ -1.69
HMGB1P48-201ENST00000446155 GDE1Q9NZC3 331 aa4.47□□□□□ -1.69
HMGB1P48-201ENST00000446155 MOSPD1Q9UJG1 213 aa4.47□□□□□ -1.69
HMGB1P48-201ENST00000446155 EXO1Q9UQ84 846 aaKnown RBP4.47□□□□□ -1.69
HMGB1P48-201ENST00000446155 FAM96BQ9Y3D0 163 aa4.47□□□□□ -1.69
HMGB1P48-201ENST00000446155 SRPRBQ9Y5M8 271 aaKnown RBP4.47□□□□□ -1.69
HMGB1P48-201ENST00000446155 INSL5Q9Y5Q6 135 aa4.47□□□□□ -1.69
HMGB1P48-201ENST00000446155 UTYO14607 1347 aa4.46□□□□□ -1.69
HMGB1P48-201ENST00000446155 GPR75-ASB3A0A0A6YYF3 556 aa4.46□□□□□ -1.7
HMGB1P48-201ENST00000446155 IGHV4-28A0A0C4DH34 117 aa4.46□□□□□ -1.7
HMGB1P48-201ENST00000446155 FAM237AA0A1B0GTK4 181 aa4.46□□□□□ -1.7
HMGB1P48-201ENST00000446155 A0A1B0GVM2 712 aa4.46□□□□□ -1.7
HMGB1P48-201ENST00000446155 A0A1W2PR77 199 aa4.46□□□□□ -1.7
HMGB1P48-201ENST00000446155 MYMKA6NI61 221 aa4.46□□□□□ -1.7
HMGB1P48-201ENST00000446155 OR6C76A6NM76 312 aa4.46□□□□□ -1.7
HMGB1P48-201ENST00000446155 VWA5AO00534 786 aa4.46□□□□□ -1.7
HMGB1P48-201ENST00000446155 ATP2C2O75185 946 aa4.46□□□□□ -1.7
HMGB1P48-201ENST00000446155 B3GALNT1O75752 331 aa4.46□□□□□ -1.7
HMGB1P48-201ENST00000446155 SLCO2B1O94956 709 aa4.46□□□□□ -1.7
HMGB1P48-201ENST00000446155 MT-CYBP00156 380 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P48-201ENST00000446155 SUPT20HL2P0C7V6 817 aa4.46□□□□□ -1.7
HMGB1P48-201ENST00000446155 MMP9P14780 707 aa4.46□□□□□ -1.7
HMGB1P48-201ENST00000446155 ZNF182P17025 639 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P48-201ENST00000446155 AGAP20933 346 aa4.46□□□□□ -1.7
HMGB1P48-201ENST00000446155 ENTPD1P49961 510 aa4.46□□□□□ -1.7
HMGB1P48-201ENST00000446155 RAB28P51157 221 aa4.46□□□□□ -1.7
HMGB1P48-201ENST00000446155 ZNF131P52739 623 aa4.46□□□□□ -1.7
HMGB1P48-201ENST00000446155 ACTN3Q08043 901 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P48-201ENST00000446155 RALGDSQ12967 914 aa4.46□□□□□ -1.7
HMGB1P48-201ENST00000446155 TUBB2AQ13885 445 aa4.46□□□□□ -1.7
HMGB1P48-201ENST00000446155 CTTNQ14247 550 aaKnown RBP4.46□□□□□ -1.7
HMGB1P48-201ENST00000446155 DRAP1Q14919 205 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P48-201ENST00000446155 SOWAHCQ53LP3 525 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P48-201ENST00000446155 DCAF6Q58WW2 860 aa4.46□□□□□ -1.7
HMGB1P48-201ENST00000446155 SGO1Q5FBB7 561 aa4.46□□□□□ -1.7
HMGB1P48-201ENST00000446155 ZRANB3Q5FWF4 1079 aa4.46□□□□□ -1.7
HMGB1P48-201ENST00000446155 FNBP1LQ5T0N5 605 aa4.46□□□□□ -1.7
HMGB1P48-201ENST00000446155 RAB12Q6IQ22 244 aa4.46□□□□□ -1.7
HMGB1P48-201ENST00000446155 NUP54Q7Z3B4 507 aa4.46□□□□□ -1.7
HMGB1P48-201ENST00000446155 CAMKMTQ7Z624 323 aa4.46□□□□□ -1.7
HMGB1P48-201ENST00000446155 NOXA1Q86UR1 476 aa4.46□□□□□ -1.7
HMGB1P48-201ENST00000446155 LURAP1LQ8IV03 231 aa4.46□□□□□ -1.7
HMGB1P48-201ENST00000446155 MB21D2Q8IYB1 491 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P48-201ENST00000446155 GUF1Q8N442 669 aaKnown RBP4.46□□□□□ -1.7
HMGB1P48-201ENST00000446155 ARL6IP6Q8N6S5 226 aa4.46□□□□□ -1.7
HMGB1P48-201ENST00000446155 TRIML1Q8N9V2 468 aa4.46□□□□□ -1.7
HMGB1P48-201ENST00000446155 ZBTB9Q96C00 473 aa4.46□□□□□ -1.7
HMGB1P48-201ENST00000446155 LINC00615Q96LM1 132 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P48-201ENST00000446155 TMEM68Q96MH6 324 aa4.46□□□□□ -1.7
HMGB1P48-201ENST00000446155 MXRA8Q9BRK3 442 aa4.46□□□□□ -1.7
HMGB1P48-201ENST00000446155 TUBB2BQ9BVA1 445 aa4.46□□□□□ -1.7
HMGB1P48-201ENST00000446155 NUP85Q9BW27 656 aa4.46□□□□□ -1.7
HMGB1P48-201ENST00000446155 DENND2DQ9H6A0 471 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P48-201ENST00000446155 WDR26Q9H7D7 661 aa4.46□□□□□ -1.7
HMGB1P48-201ENST00000446155 PDRG1Q9NUG6 133 aa4.46□□□□□ -1.7
HMGB1P48-201ENST00000446155 TRMT1Q9NXH9 659 aaKnown RBP4.46□□□□□ -1.7
HMGB1P48-201ENST00000446155 EPS15L1Q9UBC2 864 aa4.46□□□□□ -1.7
HMGB1P48-201ENST00000446155 CRNNQ9UBG3 495 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P48-201ENST00000446155 IL36RNQ9UBH0 155 aa4.46□□□□□ -1.7
HMGB1P48-201ENST00000446155 CACNG4Q9UBN1 327 aa4.46□□□□□ -1.7
HMGB1P48-201ENST00000446155 PCDHA7Q9UN72 937 aa4.46□□□□□ -1.7
HMGB1P48-201ENST00000446155 PTGDR2Q9Y5Y4 395 aa4.46□□□□□ -1.7
HMGB1P48-201ENST00000446155 UNC13AQ9UPW8 1703 aa4.46□□□□□ -1.7
HMGB1P48-201ENST00000446155 LNP1A1A4G5 178 aa4.45□□□□□ -1.7
HMGB1P48-201ENST00000446155 TYW5A2RUC4 315 aaKnown RBP4.45□□□□□ -1.7
HMGB1P48-201ENST00000446155 DNM1LO00429 736 aa4.45□□□□□ -1.7
HMGB1P48-201ENST00000446155 WNT9BO14905 357 aa4.45□□□□□ -1.7
HMGB1P48-201ENST00000446155 KINO60870 393 aaKnown RBP4.45□□□□□ -1.7
HMGB1P48-201ENST00000446155 KERAO60938 352 aa4.45□□□□□ -1.7
HMGB1P48-201ENST00000446155 CAMTA2O94983 1202 aa4.45□□□□□ -1.7
HMGB1P48-201ENST00000446155 PENKP01210 267 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P48-201ENST00000446155 PCNAP12004 261 aa4.45□□□□□ -1.7
HMGB1P48-201ENST00000446155 ACTN1P12814 892 aa4.45□□□□□ -1.7
HMGB1P48-201ENST00000446155 P4HA1P13674 534 aa4.45□□□□□ -1.7
HMGB1P48-201ENST00000446155 CHATP28329 748 aa4.45□□□□□ -1.7
HMGB1P48-201ENST00000446155 HOXD3P31249 432 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P48-201ENST00000446155 SHMT1P34896 483 aa4.45□□□□□ -1.7
HMGB1P48-201ENST00000446155 CD86P42081 329 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms