RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 USP46P62068 366 aa16.51■□□□□ 0.23
TCOF1-206ENST00000445265 FOXM1Q08050 763 aa16.51■□□□□ 0.23
TCOF1-206ENST00000445265 FAM72AQ5TYM5 149 aa16.51■□□□□ 0.23
TCOF1-206ENST00000445265 SPRYD7Q5W111 196 aa16.51■□□□□ 0.23
TCOF1-206ENST00000445265 FAM72DQ6L9T8 149 aa16.51■□□□□ 0.23
TCOF1-206ENST00000445265 DEFB128Q7Z7B8 93 aa16.51■□□□□ 0.23
TCOF1-206ENST00000445265 FAM72BQ86X60 149 aa16.51■□□□□ 0.23
TCOF1-206ENST00000445265 OFCC1Q8IZS5 231 aa16.51■□□□□ 0.23
TCOF1-206ENST00000445265 RAD18Q9NS91 495 aa16.51■□□□□ 0.23
TCOF1-206ENST00000445265 CACNG4Q9UBN1 327 aa16.51■□□□□ 0.23
TCOF1-206ENST00000445265 SLC45A1Q9Y2W3 748 aa16.51■□□□□ 0.23
TCOF1-206ENST00000445265 PCDHGC4Q9Y5F7 938 aa16.51■□□□□ 0.23
TCOF1-206ENST00000445265 KERAO60938 352 aa16.51■□□□□ 0.23
TCOF1-206ENST00000445265 SIX3O95343 332 aaPredicted RBP16.51■□□□□ 0.23
TCOF1-206ENST00000445265 JAK1P23458 1154 aa16.51■□□□□ 0.23
TCOF1-206ENST00000445265 PURAQ00577 322 aaKnown RBP16.51■□□□□ 0.23
TCOF1-206ENST00000445265 ITGA7Q13683 1181 aa16.51■□□□□ 0.23
TCOF1-206ENST00000445265 VARS2Q5ST30 1063 aaKnown RBP16.51■□□□□ 0.23
TCOF1-206ENST00000445265 TPGS1Q6ZTW0 290 aa16.51■□□□□ 0.23
TCOF1-206ENST00000445265 C11orf96Q7Z7L8 435 aa16.51■□□□□ 0.23
TCOF1-206ENST00000445265 CIR1Q86X95 450 aaPredicted RBP16.51■□□□□ 0.23
TCOF1-206ENST00000445265 ERI1Q8IV48 349 aaKnown RBP16.51■□□□□ 0.23
TCOF1-206ENST00000445265 CPNE9Q8IYJ1 553 aa16.51■□□□□ 0.23
TCOF1-206ENST00000445265 OR8H2Q8N162 312 aa16.51■□□□□ 0.23
TCOF1-206ENST00000445265 TXNDC5Q8NBS9 432 aaKnown RBP16.51■□□□□ 0.23
TCOF1-206ENST00000445265 MYDGFQ969H8 173 aa16.51■□□□□ 0.23
TCOF1-206ENST00000445265 KRT84Q9NSB2 600 aa16.51■□□□□ 0.23
TCOF1-206ENST00000445265 KCTD5Q9NXV2 234 aa16.51■□□□□ 0.23
TCOF1-206ENST00000445265 BTAF1O14981 1849 aa16.51■□□□□ 0.23
TCOF1-206ENST00000445265 NCK1P16333 377 aa16.51■□□□□ 0.23
TCOF1-206ENST00000445265 PAQR3Q6TCH7 311 aa16.51■□□□□ 0.23
TCOF1-206ENST00000445265 CASP12Q6UXS9 341 aa16.51■□□□□ 0.23
TCOF1-206ENST00000445265 TRMT11Q7Z4G4 463 aaKnown RBP16.51■□□□□ 0.23
TCOF1-206ENST00000445265 ZNF554Q86TJ5 538 aa16.51■□□□□ 0.23
TCOF1-206ENST00000445265 WDR12Q9GZL7 423 aaKnown RBP16.51■□□□□ 0.23
TCOF1-206ENST00000445265 ZDHHC6Q9H6R6 413 aa16.51■□□□□ 0.23
TCOF1-206ENST00000445265 IFT80Q9P2H3 777 aaPredicted RBP16.51■□□□□ 0.23
TCOF1-206ENST00000445265 CIDEBQ9UHD4 219 aa16.51■□□□□ 0.23
TCOF1-206ENST00000445265 ADAMTS6Q9UKP5 1117 aa16.51■□□□□ 0.23
TCOF1-206ENST00000445265 HS3ST4Q9Y661 456 aa16.51■□□□□ 0.23
TCOF1-206ENST00000445265 ARL5AQ9Y689 179 aa16.51■□□□□ 0.23
TCOF1-206ENST00000445265 UGT2B11O75310 529 aa16.5■□□□□ 0.23
TCOF1-206ENST00000445265 CORO1AP31146 461 aaKnown RBP16.5■□□□□ 0.23
TCOF1-206ENST00000445265 GTF2H2Q13888 395 aa16.5■□□□□ 0.23
TCOF1-206ENST00000445265 TAPT1Q6NXT6 567 aa16.5■□□□□ 0.23
TCOF1-206ENST00000445265 GTF2H2CQ6P1K8 395 aa16.5■□□□□ 0.23
TCOF1-206ENST00000445265 TCAIMQ8N3R3 496 aa16.5■□□□□ 0.23
TCOF1-206ENST00000445265 OR13C4Q8NGS5 318 aa16.5■□□□□ 0.23
TCOF1-206ENST00000445265 FKBPLQ9UIM3 349 aa16.5■□□□□ 0.23
TCOF1-206ENST00000445265 SNX8Q9Y5X2 465 aa16.5■□□□□ 0.23
TCOF1-206ENST00000445265 SCAMP3O14828 347 aaKnown RBP16.5■□□□□ 0.23
TCOF1-206ENST00000445265 SPIDRQ14159 915 aa16.5■□□□□ 0.23
TCOF1-206ENST00000445265 SIRPB2Q5JXA9 342 aa16.5■□□□□ 0.23
TCOF1-206ENST00000445265 TMEM63BQ5T3F8 832 aa16.5■□□□□ 0.23
TCOF1-206ENST00000445265 KRT73Q86Y46 540 aa16.5■□□□□ 0.23
TCOF1-206ENST00000445265 DEPDC4Q8N2C3 294 aa16.5■□□□□ 0.23
TCOF1-206ENST00000445265 GLB1L3Q8NCI6 653 aaPredicted RBP16.5■□□□□ 0.23
TCOF1-206ENST00000445265 SPATA17Q96L03 361 aa16.5■□□□□ 0.23
TCOF1-206ENST00000445265 TSSK3Q96PN8 268 aa16.5■□□□□ 0.23
TCOF1-206ENST00000445265 OXCT2Q9BYC2 517 aaPredicted RBP16.5■□□□□ 0.23
TCOF1-206ENST00000445265 ACTR3BQ9P1U1 418 aa16.5■□□□□ 0.23
TCOF1-206ENST00000445265 EI24O14681 340 aa16.5■□□□□ 0.23
TCOF1-206ENST00000445265 OR1D2P34982 312 aa16.5■□□□□ 0.23
TCOF1-206ENST00000445265 CRATP43155 626 aa16.5■□□□□ 0.23
TCOF1-206ENST00000445265 HSPA7P48741 367 aa16.5■□□□□ 0.23
TCOF1-206ENST00000445265 ARMC4Q5T2S8 1044 aa16.5■□□□□ 0.23
TCOF1-206ENST00000445265 BNIPLQ7Z465 357 aa16.5■□□□□ 0.23
TCOF1-206ENST00000445265 CILP2Q8IUL8 1156 aa16.5■□□□□ 0.23
TCOF1-206ENST00000445265 EMID1Q96A84 441 aaPredicted RBP16.5■□□□□ 0.23
TCOF1-206ENST00000445265 ZHX1-C8orf76Q96EF9 292 aa16.5■□□□□ 0.23
TCOF1-206ENST00000445265 CDKN2AIPNLQ96HQ2 116 aa16.5■□□□□ 0.23
TCOF1-206ENST00000445265 SUSD3Q96L08 255 aa16.5■□□□□ 0.23
TCOF1-206ENST00000445265 TMEM209Q96SK2 561 aa16.5■□□□□ 0.23
TCOF1-206ENST00000445265 SDHDO14521 159 aa16.49■□□□□ 0.23
TCOF1-206ENST00000445265 SH3BGRLO75368 114 aa16.49■□□□□ 0.23
TCOF1-206ENST00000445265 NRG1Q02297 640 aaPredicted RBP16.49■□□□□ 0.23
TCOF1-206ENST00000445265 ERMP1Q7Z2K6 904 aa16.49■□□□□ 0.23
TCOF1-206ENST00000445265 SVOPLQ8N434 492 aa16.49■□□□□ 0.23
TCOF1-206ENST00000445265 ARL10Q8N8L6 244 aa16.49■□□□□ 0.23
TCOF1-206ENST00000445265 RRAGCQ9HB90 399 aa16.49■□□□□ 0.23
TCOF1-206ENST00000445265 SPG21Q9NZD8 308 aa16.49■□□□□ 0.23
TCOF1-206ENST00000445265 IKZF3Q9UKT9 509 aa16.49■□□□□ 0.23
TCOF1-206ENST00000445265 ARPC2O15144 300 aa16.49■□□□□ 0.23
TCOF1-206ENST00000445265 CNPP09543 421 aaKnown RBP16.49■□□□□ 0.23
TCOF1-206ENST00000445265 RAP2AP10114 183 aa16.49■□□□□ 0.23
TCOF1-206ENST00000445265 ITGA2P17301 1181 aa16.49■□□□□ 0.23
TCOF1-206ENST00000445265 IL4RP24394 825 aa16.49■□□□□ 0.23
TCOF1-206ENST00000445265 RPL3P39023 403 aaKnown RBP16.49■□□□□ 0.23
TCOF1-206ENST00000445265 ATP4BP51164 291 aa16.49■□□□□ 0.23
TCOF1-206ENST00000445265 YAF2Q8IY57 180 aa16.49■□□□□ 0.23
TCOF1-206ENST00000445265 SLC39A3Q9BRY0 314 aa16.49■□□□□ 0.23
TCOF1-206ENST00000445265 YTHDF1Q9BYJ9 559 aaKnown RBP16.49■□□□□ 0.23
TCOF1-206ENST00000445265 Q9Y3F1 56 aa16.49■□□□□ 0.23
TCOF1-206ENST00000445265 U3KQV3 271 aa16.49■□□□□ 0.23
TCOF1-206ENST00000445265 GLYATL1P3A0A0U1RQE8 302 aa16.49■□□□□ 0.23
TCOF1-206ENST00000445265 CAPN14A8MX76 684 aa16.49■□□□□ 0.23
TCOF1-206ENST00000445265 ASNA1O43681 348 aa16.49■□□□□ 0.23
TCOF1-206ENST00000445265 SGTAO43765 313 aa16.49■□□□□ 0.23
TCOF1-206ENST00000445265 SNAI1O95863 264 aaPredicted RBP16.49■□□□□ 0.23
TCOF1-206ENST00000445265 FTH1P02794 183 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms