RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 SCARF2Q96GP6 870 aaPredicted RBP13.88□□□□□ -0.19
TREX1-202ENST00000444177 COX14Q96I36 57 aa13.88□□□□□ -0.19
TREX1-202ENST00000444177 SPATA13Q96N96 652 aa13.88□□□□□ -0.19
TREX1-202ENST00000444177 GORASP1Q9BQQ3 440 aa13.88□□□□□ -0.19
TREX1-202ENST00000444177 FICDQ9BVA6 458 aa13.88□□□□□ -0.19
TREX1-202ENST00000444177 BPIFA1Q9NP55 256 aa13.88□□□□□ -0.19
TREX1-202ENST00000444177 RAD18Q9NS91 495 aa13.88□□□□□ -0.19
TREX1-202ENST00000444177 PLEKHM1Q9Y4G2 1056 aa13.88□□□□□ -0.19
TREX1-202ENST00000444177 PCDHGA7Q9Y5G6 932 aa13.88□□□□□ -0.19
TREX1-202ENST00000444177 ST14Q9Y5Y6 855 aa13.88□□□□□ -0.19
TREX1-202ENST00000444177 OAS3Q9Y6K5 1087 aaKnown RBP13.88□□□□□ -0.19
TREX1-202ENST00000444177 ATMQ13315 3056 aa13.88□□□□□ -0.19
TREX1-202ENST00000444177 SCN8AQ9UQD0 1980 aa13.87□□□□□ -0.19
TREX1-202ENST00000444177 TCRBV7S2A1N4TA0A589 114 aa13.87□□□□□ -0.19
TREX1-202ENST00000444177 RHPN2P1A8MT19 583 aa13.87□□□□□ -0.19
TREX1-202ENST00000444177 ECEL1O95672 775 aa13.87□□□□□ -0.19
TREX1-202ENST00000444177 BPIP17213 487 aa13.87□□□□□ -0.19
TREX1-202ENST00000444177 OR1D5P58170 312 aa13.87□□□□□ -0.19
TREX1-202ENST00000444177 RHDQ02161 417 aa13.87□□□□□ -0.19
TREX1-202ENST00000444177 C19orf57Q0VDD7 668 aa13.87□□□□□ -0.19
TREX1-202ENST00000444177 CLN3Q13286 438 aa13.87□□□□□ -0.19
TREX1-202ENST00000444177 TMPRSS9Q7Z410 1059 aa13.87□□□□□ -0.19
TREX1-202ENST00000444177 JAMLQ86YT9 394 aa13.87□□□□□ -0.19
TREX1-202ENST00000444177 PHYKPLQ8IUZ5 450 aa13.87□□□□□ -0.19
TREX1-202ENST00000444177 TRAM1L1Q8N609 369 aa13.87□□□□□ -0.19
TREX1-202ENST00000444177 SNRNP27Q8WVK2 155 aaKnown RBP13.87□□□□□ -0.19
TREX1-202ENST00000444177 APOL2Q9BQE5 337 aa13.87□□□□□ -0.19
TREX1-202ENST00000444177 ZSCAN5AQ9BUG6 496 aa13.87□□□□□ -0.19
TREX1-202ENST00000444177 TRABDQ9H4I3 376 aa13.87□□□□□ -0.19
TREX1-202ENST00000444177 ARFGAP3Q9NP61 516 aa13.87□□□□□ -0.19
TREX1-202ENST00000444177 VPS18Q9P253 973 aa13.87□□□□□ -0.19
TREX1-202ENST00000444177 NFKBIL1Q9UBC1 381 aaPredicted RBP13.87□□□□□ -0.19
TREX1-202ENST00000444177 PISDQ9UG56 409 aa13.87□□□□□ -0.19
TREX1-202ENST00000444177 CNOT6Q9ULM6 557 aaKnown RBP13.87□□□□□ -0.19
TREX1-202ENST00000444177 R3HDM2Q9Y2K5 976 aaKnown RBP13.87□□□□□ -0.19
TREX1-202ENST00000444177 AAR2Q9Y312 384 aaKnown RBP13.87□□□□□ -0.19
TREX1-202ENST00000444177 LOXL2Q9Y4K0 774 aa13.87□□□□□ -0.19
TREX1-202ENST00000444177 ERVH48-1M5A8F1 160 aa13.86□□□□□ -0.19
TREX1-202ENST00000444177 AGRPO00253 132 aa13.86□□□□□ -0.19
TREX1-202ENST00000444177 NVLO15381 856 aaKnown RBP13.86□□□□□ -0.19
TREX1-202ENST00000444177 C1QL1O75973 258 aa13.86□□□□□ -0.19
TREX1-202ENST00000444177 AGTP01019 485 aa13.86□□□□□ -0.19
TREX1-202ENST00000444177 EPOP01588 193 aa13.86□□□□□ -0.19
TREX1-202ENST00000444177 JMJD7P0C870 316 aa13.86□□□□□ -0.19
TREX1-202ENST00000444177 ALDH4A1P30038 563 aa13.86□□□□□ -0.19
TREX1-202ENST00000444177 ACTR1BP42025 376 aa13.86□□□□□ -0.19
TREX1-202ENST00000444177 ACTR1AP61163 376 aa13.86□□□□□ -0.19
TREX1-202ENST00000444177 OLIG2Q13516 323 aa13.86□□□□□ -0.19
TREX1-202ENST00000444177 PEX6Q13608 980 aa13.86□□□□□ -0.19
TREX1-202ENST00000444177 RPS6KA1Q15418 735 aa13.86□□□□□ -0.19
TREX1-202ENST00000444177 AMZ1Q400G9 498 aa13.86□□□□□ -0.19
TREX1-202ENST00000444177 PYCR3Q53H96 274 aa13.86□□□□□ -0.19
TREX1-202ENST00000444177 MEI1Q5TIA1 1274 aa13.86□□□□□ -0.19
TREX1-202ENST00000444177 ARHGEF18Q6ZSZ5 1173 aa13.86□□□□□ -0.19
TREX1-202ENST00000444177 USP53Q70EK8 1073 aa13.86□□□□□ -0.19
TREX1-202ENST00000444177 ZNF438Q7Z4V0 828 aa13.86□□□□□ -0.19
TREX1-202ENST00000444177 PIM3Q86V86 326 aa13.86□□□□□ -0.19
TREX1-202ENST00000444177 SLITRK4Q8IW52 837 aa13.86□□□□□ -0.19
TREX1-202ENST00000444177 REXO1L1PQ8IX06 675 aa13.86□□□□□ -0.19
TREX1-202ENST00000444177 NAGSQ8N159 534 aa13.86□□□□□ -0.19
TREX1-202ENST00000444177 FAM71DQ8N9W8 422 aa13.86□□□□□ -0.19
TREX1-202ENST00000444177 PATE1Q8WXA2 126 aa13.86□□□□□ -0.19
TREX1-202ENST00000444177 ATG4AQ8WYN0 398 aa13.86□□□□□ -0.19
TREX1-202ENST00000444177 TMEM159Q96B96 161 aa13.86□□□□□ -0.19
TREX1-202ENST00000444177 LRRC45Q96CN5 670 aa13.86□□□□□ -0.19
TREX1-202ENST00000444177 PPP1R2P1Q96PQ5 205 aa13.86□□□□□ -0.19
TREX1-202ENST00000444177 TMEM121Q9BTD3 319 aa13.86□□□□□ -0.19
TREX1-202ENST00000444177 SEMA6CQ9H3T2 930 aa13.86□□□□□ -0.19
TREX1-202ENST00000444177 RDH14Q9HBH5 336 aa13.86□□□□□ -0.19
TREX1-202ENST00000444177 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.86□□□□□ -0.19
TREX1-202ENST00000444177 HACD3Q9P035 362 aa13.86□□□□□ -0.19
TREX1-202ENST00000444177 PRKAB1Q9Y478 270 aa13.86□□□□□ -0.19
TREX1-202ENST00000444177 COL6A6A6NMZ7 2263 aa13.86□□□□□ -0.19
TREX1-202ENST00000444177 K7ENP7 123 aa13.85□□□□□ -0.19
TREX1-202ENST00000444177 PPM1DO15297 605 aa13.85□□□□□ -0.19
TREX1-202ENST00000444177 ZW10O43264 779 aa13.85□□□□□ -0.19
TREX1-202ENST00000444177 BUD23O43709 281 aaKnown RBP13.85□□□□□ -0.19
TREX1-202ENST00000444177 DNAJC6O75061 913 aa13.85□□□□□ -0.19
TREX1-202ENST00000444177 SLC25A14O95258 325 aaPredicted RBP13.85□□□□□ -0.19
TREX1-202ENST00000444177 CPNE6O95741 557 aa13.85□□□□□ -0.19
TREX1-202ENST00000444177 ITIH1P19827 911 aa13.85□□□□□ -0.19
TREX1-202ENST00000444177 CD1CP29017 333 aa13.85□□□□□ -0.19
TREX1-202ENST00000444177 HMGCLP35914 325 aa13.85□□□□□ -0.19
TREX1-202ENST00000444177 SPAM1P38567 509 aa13.85□□□□□ -0.19
TREX1-202ENST00000444177 GDF10P55107 478 aa13.85□□□□□ -0.19
TREX1-202ENST00000444177 BIRC2Q13490 618 aa13.85□□□□□ -0.19
TREX1-202ENST00000444177 NR1D2Q14995 579 aa13.85□□□□□ -0.19
TREX1-202ENST00000444177 TAF1BQ53T94 588 aaPredicted RBP13.85□□□□□ -0.19
TREX1-202ENST00000444177 ZNF648Q5T619 568 aaPredicted RBP13.85□□□□□ -0.19
TREX1-202ENST00000444177 PHF19Q5T6S3 580 aa13.85□□□□□ -0.19
TREX1-202ENST00000444177 PDPK2PQ6A1A2 396 aa13.85□□□□□ -0.19
TREX1-202ENST00000444177 INO80CQ6PI98 192 aaPredicted RBP13.85□□□□□ -0.19
TREX1-202ENST00000444177 ZNF574Q6ZN55 896 aaPredicted RBP13.85□□□□□ -0.19
TREX1-202ENST00000444177 CCDC81Q6ZN84 652 aa13.85□□□□□ -0.19
TREX1-202ENST00000444177 TTC30BQ8N4P2 665 aa13.85□□□□□ -0.19
TREX1-202ENST00000444177 SLC35B2Q8TB61 432 aa13.85□□□□□ -0.19
TREX1-202ENST00000444177 GLYATL1Q969I3 302 aa13.85□□□□□ -0.19
TREX1-202ENST00000444177 WBP1Q96G27 269 aa13.85□□□□□ -0.19
TREX1-202ENST00000444177 PLEKHG4BQ96PX9 1271 aa13.85□□□□□ -0.19
TREX1-202ENST00000444177 CCNL2Q96S94 520 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms